RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 TPRKBQ9Y3C4 175 aa0.98□□□□□ -2.25
PTPN4-205ENST00000433888 INTS1Q8N201 2190 aaKnown RBP0.98□□□□□ -2.25
PTPN4-205ENST00000433888 KMT2BQ9UMN6 2715 aaPredicted RBP0.98□□□□□ -2.25
PTPN4-205ENST00000433888 COL4A1P02462 1669 aa0.97□□□□□ -2.25
PTPN4-205ENST00000433888 RTTNQ86VV8 2226 aa0.97□□□□□ -2.25
PTPN4-205ENST00000433888 FRMPD1Q5SYB0 1578 aa0.97□□□□□ -2.25
PTPN4-205ENST00000433888 TNRC6BQ9UPQ9 1833 aaKnown RBP0.97□□□□□ -2.25
PTPN4-205ENST00000433888 TRAV36DV7A0A075B6V5 113 aa0.97□□□□□ -2.25
PTPN4-205ENST00000433888 C9JAW5 83 aa0.97□□□□□ -2.25
PTPN4-205ENST00000433888 E7EUB6 86 aa0.97□□□□□ -2.25
PTPN4-205ENST00000433888 CCL16O15467 120 aa0.97□□□□□ -2.25
PTPN4-205ENST00000433888 HCRTO43612 131 aa0.97□□□□□ -2.25
PTPN4-205ENST00000433888 TNFSF15O95150 251 aa0.97□□□□□ -2.25
PTPN4-205ENST00000433888 FAM107AO95990 144 aa0.97□□□□□ -2.25
PTPN4-205ENST00000433888 TCRAP04437 139 aa0.97□□□□□ -2.25
PTPN4-205ENST00000433888 SLC25A5P05141 298 aaKnown RBP0.97□□□□□ -2.25
PTPN4-205ENST00000433888 FABP4P15090 132 aa0.97□□□□□ -2.25
PTPN4-205ENST00000433888 DSCR4P56555 118 aaPredicted RBP0.97□□□□□ -2.25
PTPN4-205ENST00000433888 CIRBPQ14011 172 aaKnown RBP0.97□□□□□ -2.25
PTPN4-205ENST00000433888 DIAPH2-AS1Q14236 149 aa0.97□□□□□ -2.25
PTPN4-205ENST00000433888 Q5XG85 94 aa0.97□□□□□ -2.25
PTPN4-205ENST00000433888 OR8I2Q8N0Y5 310 aa0.97□□□□□ -2.25
PTPN4-205ENST00000433888 OR51A4Q8NGJ6 313 aa0.97□□□□□ -2.25
PTPN4-205ENST00000433888 OBSCN-AS1Q96MR7 158 aa0.97□□□□□ -2.25
PTPN4-205ENST00000433888 AP1S3Q96PC3 154 aa0.97□□□□□ -2.25
PTPN4-205ENST00000433888 OR4C12Q96R67 309 aa0.97□□□□□ -2.25
PTPN4-205ENST00000433888 TP53RKQ96S44 253 aa0.97□□□□□ -2.25
PTPN4-205ENST00000433888 LINC00467Q9BRT7 94 aa0.97□□□□□ -2.25
PTPN4-205ENST00000433888 FAM107BQ9H098 131 aa0.97□□□□□ -2.25
PTPN4-205ENST00000433888 CST11Q9H112 138 aa0.97□□□□□ -2.25
PTPN4-205ENST00000433888 CALML5Q9NZT1 146 aa0.97□□□□□ -2.25
PTPN4-205ENST00000433888 HIGD1AQ9Y241 93 aa0.97□□□□□ -2.25
PTPN4-205ENST00000433888 ZFP30Q9Y2G7 519 aa0.97□□□□□ -2.25
PTPN4-205ENST00000433888 ALPK2Q86TB3 2170 aa0.97□□□□□ -2.25
PTPN4-205ENST00000433888 MED13Q9UHV7 2174 aa0.97□□□□□ -2.25
PTPN4-205ENST00000433888 ADGBQ8N7X0 1667 aa0.97□□□□□ -2.25
PTPN4-205ENST00000433888 TRPM7Q96QT4 1865 aa0.97□□□□□ -2.25
PTPN4-205ENST00000433888 COL24A1Q17RW2 1714 aa0.96□□□□□ -2.26
PTPN4-205ENST00000433888 TRBV6-7A0A0A0MS04 114 aa0.96□□□□□ -2.26
PTPN4-205ENST00000433888 TRAV5A0A0B4J249 113 aa0.96□□□□□ -2.26
PTPN4-205ENST00000433888 IGKV3D-7A0A0C4DH55 119 aa0.96□□□□□ -2.26
PTPN4-205ENST00000433888 IGKV3OR2-268A0A0C4DH90 116 aa0.96□□□□□ -2.26
PTPN4-205ENST00000433888 TRBV27A0A0K0K1C4 114 aa0.96□□□□□ -2.26
PTPN4-205ENST00000433888 C3orf85A0A1B0GTC6 90 aa0.96□□□□□ -2.26
PTPN4-205ENST00000433888 F8W1H4 67 aa0.96□□□□□ -2.26
PTPN4-205ENST00000433888 CCL25O15444 150 aa0.96□□□□□ -2.26
PTPN4-205ENST00000433888 LYRM1O43325 122 aa0.96□□□□□ -2.26
PTPN4-205ENST00000433888 PAEPP09466 180 aa0.96□□□□□ -2.26
PTPN4-205ENST00000433888 LYNX1P0DP58 116 aa0.96□□□□□ -2.26
PTPN4-205ENST00000433888 SLC25A4P12235 298 aa0.96□□□□□ -2.26
PTPN4-205ENST00000433888 MAXP61244 160 aa0.96□□□□□ -2.26
PTPN4-205ENST00000433888 BLCAPP62952 87 aa0.96□□□□□ -2.26
PTPN4-205ENST00000433888 MIR22HGQ0VDD5 57 aa0.96□□□□□ -2.26
PTPN4-205ENST00000433888 FAM74A1Q5RGS3 127 aa0.96□□□□□ -2.26
PTPN4-205ENST00000433888 ZCCHC23Q6ZST2 131 aa0.96□□□□□ -2.26
PTPN4-205ENST00000433888 FAM19A2Q8N3H0 131 aa0.96□□□□□ -2.26
PTPN4-205ENST00000433888 OR4B1Q8NGF8 309 aa0.96□□□□□ -2.26
PTPN4-205ENST00000433888 OR4C6Q8NH72 309 aa0.96□□□□□ -2.26
PTPN4-205ENST00000433888 DIRC1Q969H9 104 aa0.96□□□□□ -2.26
PTPN4-205ENST00000433888 LINC00052Q96N35 136 aa0.96□□□□□ -2.26
PTPN4-205ENST00000433888 NABP2Q9BQ15 211 aa0.96□□□□□ -2.26
PTPN4-205ENST00000433888 SNURFQ9Y675 71 aa0.96□□□□□ -2.26
PTPN4-205ENST00000433888 OVOS2A0A0G2JMS6 1433 aa0.96□□□□□ -2.26
PTPN4-205ENST00000433888 TRAPPC8Q9Y2L5 1435 aa0.96□□□□□ -2.26
PTPN4-205ENST00000433888 CHD3Q12873 2000 aaKnown RBP0.96□□□□□ -2.26
PTPN4-205ENST00000433888 RTL9Q8NET4 1388 aa0.96□□□□□ -2.26
PTPN4-205ENST00000433888 DLC1Q96QB1 1528 aa0.95□□□□□ -2.26
PTPN4-205ENST00000433888 IGKV2-29A2NJV5 120 aaPredicted RBP0.95□□□□□ -2.26
PTPN4-205ENST00000433888 M0R129 80 aa0.95□□□□□ -2.26
PTPN4-205ENST00000433888 MRPS14O60783 128 aaKnown RBP0.95□□□□□ -2.26
PTPN4-205ENST00000433888 DPM2O94777 84 aa0.95□□□□□ -2.26
PTPN4-205ENST00000433888 PRB1P04280 392 aa0.95□□□□□ -2.26
PTPN4-205ENST00000433888 CXCL8P10145 99 aa0.95□□□□□ -2.26
PTPN4-205ENST00000433888 TPT1P13693 172 aaKnown RBP0.95□□□□□ -2.26
PTPN4-205ENST00000433888 HIST1H1AQ02539 215 aaPredicted RBP0.95□□□□□ -2.26
PTPN4-205ENST00000433888 Q6ZSA8 131 aa0.95□□□□□ -2.26
PTPN4-205ENST00000433888 ZNF833PQ6ZTB9 187 aa0.95□□□□□ -2.26
PTPN4-205ENST00000433888 ARPINQ7Z6K5 226 aa0.95□□□□□ -2.26
PTPN4-205ENST00000433888 LIMD2Q9BT23 127 aa0.95□□□□□ -2.26
PTPN4-205ENST00000433888 SMIM3Q9BZL3 60 aa0.95□□□□□ -2.26
PTPN4-205ENST00000433888 WFDC10AQ9H1F0 79 aa0.95□□□□□ -2.26
PTPN4-205ENST00000433888 TMEM138Q9NPI0 162 aa0.95□□□□□ -2.26
PTPN4-205ENST00000433888 HSPB8Q9UJY1 196 aa0.95□□□□□ -2.26
PTPN4-205ENST00000433888 FAM135BQ49AJ0 1406 aa0.95□□□□□ -2.26
PTPN4-205ENST00000433888 SYNJ1O43426 1573 aa0.95□□□□□ -2.26
PTPN4-205ENST00000433888 SDK1Q7Z5N4 2213 aa0.95□□□□□ -2.26
PTPN4-205ENST00000433888 A2MP01023 1474 aa0.94□□□□□ -2.26
PTPN4-205ENST00000433888 MYH1P12882 1939 aa0.94□□□□□ -2.26
PTPN4-205ENST00000433888 MYLKQ15746 1914 aa0.94□□□□□ -2.26
PTPN4-205ENST00000433888 IGKV3-7A0A075B6H7 116 aa0.94□□□□□ -2.26
PTPN4-205ENST00000433888 TRAV23DV6A0A075B6W5 121 aa0.94□□□□□ -2.26
PTPN4-205ENST00000433888 A0A096LPI6 279 aa0.94□□□□□ -2.26
PTPN4-205ENST00000433888 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.94□□□□□ -2.26
PTPN4-205ENST00000433888 TMEM189A5PLL7 270 aa0.94□□□□□ -2.26
PTPN4-205ENST00000433888 OR2H2O95918 312 aa0.94□□□□□ -2.26
PTPN4-205ENST00000433888 HBDP02042 147 aa0.94□□□□□ -2.26
PTPN4-205ENST00000433888 TFF1P04155 84 aa0.94□□□□□ -2.26
PTPN4-205ENST00000433888 CD14P08571 375 aa0.94□□□□□ -2.26
PTPN4-205ENST00000433888 SCGB1A1P11684 91 aa0.94□□□□□ -2.26
PTPN4-205ENST00000433888 RPL22P35268 128 aaKnown RBP0.94□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms