RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 ORM1P02763 201 aa9.11□□□□□ -0.95
HMGCS1-202ENST00000433297 ZNF562Q6V9R5 426 aa9.11□□□□□ -0.95
HMGCS1-202ENST00000433297 TMEM75Q8N9X5 138 aa9.11□□□□□ -0.95
HMGCS1-202ENST00000433297 MAP1LC3AQ9H492 121 aa9.11□□□□□ -0.95
HMGCS1-202ENST00000433297 POLEQ07864 2286 aa9.11□□□□□ -0.95
HMGCS1-202ENST00000433297 PRR33A8MZF0 331 aa9.11□□□□□ -0.95
HMGCS1-202ENST00000433297 SCGB1A1P11684 91 aa9.11□□□□□ -0.95
HMGCS1-202ENST00000433297 ZNF493Q6ZR52 646 aa9.11□□□□□ -0.95
HMGCS1-202ENST00000433297 FBXL15Q9H469 300 aa9.11□□□□□ -0.95
HMGCS1-202ENST00000433297 SIGLEC15Q6ZMC9 328 aa9.11□□□□□ -0.95
HMGCS1-202ENST00000433297 AAMDCQ9H7C9 122 aa9.11□□□□□ -0.95
HMGCS1-202ENST00000433297 HHLA3Q9XRX5 114 aa9.11□□□□□ -0.95
HMGCS1-202ENST00000433297 CNIH1O95406 144 aa9.1□□□□□ -0.95
HMGCS1-202ENST00000433297 WT1P19544 449 aaPredicted RBP9.1□□□□□ -0.95
HMGCS1-202ENST00000433297 CRYBA4P53673 196 aa9.1□□□□□ -0.95
HMGCS1-202ENST00000433297 ODF1Q14990 250 aa9.1□□□□□ -0.95
HMGCS1-202ENST00000433297 C20orf78Q9BR46 151 aa9.1□□□□□ -0.95
HMGCS1-202ENST00000433297 DMXL2Q8TDJ6 3036 aa9.1□□□□□ -0.95
HMGCS1-202ENST00000433297 C16orf97H3BN30 126 aa9.1□□□□□ -0.95
HMGCS1-202ENST00000433297 LYPD2Q6UXB3 125 aa9.1□□□□□ -0.95
HMGCS1-202ENST00000433297 MAPKAPK5-AS1Q8N8E1 139 aa9.1□□□□□ -0.95
HMGCS1-202ENST00000433297 NDUFS8O00217 210 aa9.1□□□□□ -0.95
HMGCS1-202ENST00000433297 NDUFA3O95167 84 aa9.1□□□□□ -0.95
HMGCS1-202ENST00000433297 EGR2P11161 476 aaPredicted RBP9.1□□□□□ -0.95
HMGCS1-202ENST00000433297 PHLDA1Q8WV24 401 aaPredicted RBP9.1□□□□□ -0.95
HMGCS1-202ENST00000433297 TMEM158Q8WZ71 300 aa9.1□□□□□ -0.95
HMGCS1-202ENST00000433297 SH3BGRL2Q9UJC5 107 aa9.1□□□□□ -0.95
HMGCS1-202ENST00000433297 C12orf74Q32Q52 190 aa9.09□□□□□ -0.95
HMGCS1-202ENST00000433297 KLF17Q5JT82 389 aaPredicted RBP9.09□□□□□ -0.95
HMGCS1-202ENST00000433297 GEMIN7Q9H840 131 aaKnown RBP9.09□□□□□ -0.95
HMGCS1-202ENST00000433297 RAI1Q7Z5J4 1906 aaPredicted RBP9.09□□□□□ -0.95
HMGCS1-202ENST00000433297 E9PLD3 99 aa9.09□□□□□ -0.95
HMGCS1-202ENST00000433297 MC5RP33032 325 aa9.09□□□□□ -0.95
HMGCS1-202ENST00000433297 FDCSPQ8NFU4 85 aa9.09□□□□□ -0.95
HMGCS1-202ENST00000433297 LINC00574Q9H8X3 128 aa9.09□□□□□ -0.95
HMGCS1-202ENST00000433297 TMEM14CQ9P0S9 112 aa9.09□□□□□ -0.95
HMGCS1-202ENST00000433297 SMPXQ9UHP9 88 aa9.09□□□□□ -0.95
HMGCS1-202ENST00000433297 U3KQK5 164 aa9.09□□□□□ -0.95
HMGCS1-202ENST00000433297 IGHV3OR16-8A0A075B7F1 116 aa9.08□□□□□ -0.96
HMGCS1-202ENST00000433297 NDUFB3O43676 98 aa9.08□□□□□ -0.96
HMGCS1-202ENST00000433297 DPM2O94777 84 aa9.08□□□□□ -0.96
HMGCS1-202ENST00000433297 IGKV1-17P01599 117 aa9.08□□□□□ -0.96
HMGCS1-202ENST00000433297 SRSF6Q13247 344 aaKnown RBP9.08□□□□□ -0.96
HMGCS1-202ENST00000433297 MRGPRG-AS1Q2M3A8 158 aa9.08□□□□□ -0.96
HMGCS1-202ENST00000433297 TDHQ8IZJ6 230 aa9.08□□□□□ -0.96
HMGCS1-202ENST00000433297 SVIPQ8NHG7 77 aa9.08□□□□□ -0.96
HMGCS1-202ENST00000433297 CSMD1Q96PZ7 3565 aa9.08□□□□□ -0.96
HMGCS1-202ENST00000433297 AGRNO00468 2067 aa9.08□□□□□ -0.96
HMGCS1-202ENST00000433297 PRRG2O14669 202 aa9.08□□□□□ -0.96
HMGCS1-202ENST00000433297 APOMO95445 188 aa9.08□□□□□ -0.96
HMGCS1-202ENST00000433297 GATA4P43694 442 aa9.08□□□□□ -0.96
HMGCS1-202ENST00000433297 C22orf34Q6ZV56 151 aa9.08□□□□□ -0.96
HMGCS1-202ENST00000433297 MRPL35Q9NZE8 188 aaKnown RBP9.08□□□□□ -0.96
HMGCS1-202ENST00000433297 TRIOBPQ9H2D6 2365 aa9.08□□□□□ -0.96
HMGCS1-202ENST00000433297 ZNF474Q6S9Z5 364 aaPredicted RBP9.08□□□□□ -0.96
HMGCS1-202ENST00000433297 PPP1R27Q86WC6 154 aa9.08□□□□□ -0.96
HMGCS1-202ENST00000433297 TTC9CQ8N5M4 171 aa9.08□□□□□ -0.96
HMGCS1-202ENST00000433297 SHANK2-AS3Q9BTD1 123 aa9.08□□□□□ -0.96
HMGCS1-202ENST00000433297 SIGLEC9Q9Y336 463 aa9.08□□□□□ -0.96
HMGCS1-202ENST00000433297 CACNA1GO43497 2377 aa9.07□□□□□ -0.96
HMGCS1-202ENST00000433297 FCN3O75636 299 aa9.07□□□□□ -0.96
HMGCS1-202ENST00000433297 HOXB4P17483 251 aaPredicted RBP9.07□□□□□ -0.96
HMGCS1-202ENST00000433297 PAX8Q06710 450 aa9.07□□□□□ -0.96
HMGCS1-202ENST00000433297 FAM27E3Q08E93 113 aa9.07□□□□□ -0.96
HMGCS1-202ENST00000433297 TMEM30BQ3MIR4 351 aa9.07□□□□□ -0.96
HMGCS1-202ENST00000433297 GATD1Q8NB37 220 aa9.07□□□□□ -0.96
HMGCS1-202ENST00000433297 RNF125Q96EQ8 232 aa9.07□□□□□ -0.96
HMGCS1-202ENST00000433297 ARRDC1-AS1Q9H2J1 176 aa9.07□□□□□ -0.96
HMGCS1-202ENST00000433297 HIGD1BQ9P298 99 aa9.07□□□□□ -0.96
HMGCS1-202ENST00000433297 TNFRSF6BO95407 300 aa9.07□□□□□ -0.96
HMGCS1-202ENST00000433297 SYT8Q8NBV8 401 aa9.07□□□□□ -0.96
HMGCS1-202ENST00000433297 KLK15Q9H2R5 256 aa9.07□□□□□ -0.96
HMGCS1-202ENST00000433297 TACC2O95359 2948 aa9.07□□□□□ -0.96
HMGCS1-202ENST00000433297 IGLV3-9A0A075B6K5 115 aa9.07□□□□□ -0.96
HMGCS1-202ENST00000433297 ZNF80P51504 273 aaPredicted RBP9.07□□□□□ -0.96
HMGCS1-202ENST00000433297 SPATA25Q9BR10 227 aa9.07□□□□□ -0.96
HMGCS1-202ENST00000433297 CYSLTR1Q9Y271 337 aa9.07□□□□□ -0.96
HMGCS1-202ENST00000433297 WNK2Q9Y3S1 2297 aa9.07□□□□□ -0.96
HMGCS1-202ENST00000433297 ZZEF1O43149 2961 aa9.07□□□□□ -0.96
HMGCS1-202ENST00000433297 IGHV3-35A0A0C4DH35 117 aa9.06□□□□□ -0.96
HMGCS1-202ENST00000433297 IGHV3-23P01764 117 aa9.06□□□□□ -0.96
HMGCS1-202ENST00000433297 IGHG3P01860 377 aa9.06□□□□□ -0.96
HMGCS1-202ENST00000433297 COX7A1P24310 79 aa9.06□□□□□ -0.96
HMGCS1-202ENST00000433297 ZNF418Q8TF45 676 aaPredicted RBP9.06□□□□□ -0.96
HMGCS1-202ENST00000433297 IGFBPL1Q8WX77 278 aa9.06□□□□□ -0.96
HMGCS1-202ENST00000433297 TM2D2Q9BX73 214 aa9.06□□□□□ -0.96
HMGCS1-202ENST00000433297 DKK4Q9UBT3 224 aa9.06□□□□□ -0.96
HMGCS1-202ENST00000433297 LOC107984156A0A0G2JMH3 177 aa9.06□□□□□ -0.96
HMGCS1-202ENST00000433297 HLA-DMBP28068 263 aa9.06□□□□□ -0.96
HMGCS1-202ENST00000433297 ARL17AQ8IVW1 177 aa9.06□□□□□ -0.96
HMGCS1-202ENST00000433297 MYOZ3Q8TDC0 251 aa9.06□□□□□ -0.96
HMGCS1-202ENST00000433297 SPINK8P0C7L1 97 aa9.06□□□□□ -0.96
HMGCS1-202ENST00000433297 ZNF491Q8N8L2 437 aa9.06□□□□□ -0.96
HMGCS1-202ENST00000433297 RPEQ96AT9 228 aa9.05□□□□□ -0.96
HMGCS1-202ENST00000433297 MRAP2Q96G30 205 aa9.05□□□□□ -0.96
HMGCS1-202ENST00000433297 H3BRN7 92 aa9.05□□□□□ -0.96
HMGCS1-202ENST00000433297 I3L2K1 104 aa9.05□□□□□ -0.96
HMGCS1-202ENST00000433297 TRAV26-2A0A0B4J265 109 aa9.04□□□□□ -0.96
HMGCS1-202ENST00000433297 NCBP2LA6PVI3 153 aaKnown RBP9.04□□□□□ -0.96
HMGCS1-202ENST00000433297 TEX22C9J3V5 150 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms