RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 KISS1Q15726 138 aa1.62□□□□□ -2.15
CLK1-204ENST00000432425 MPV17L2Q567V2 206 aa1.62□□□□□ -2.15
CLK1-204ENST00000432425 Q56UQ5 140 aa1.62□□□□□ -2.15
CLK1-204ENST00000432425 KIAA2026Q5HYC2 2103 aa1.62□□□□□ -2.15
CLK1-204ENST00000432425 TMEM91Q6ZNR0 172 aa1.62□□□□□ -2.15
CLK1-204ENST00000432425 PHF5AQ7RTV0 110 aaKnown RBP1.62□□□□□ -2.15
CLK1-204ENST00000432425 ADM2Q7Z4H4 148 aa1.62□□□□□ -2.15
CLK1-204ENST00000432425 BPIFA4PQ86YQ2 179 aa1.62□□□□□ -2.15
CLK1-204ENST00000432425 SLC25A29Q8N8R3 303 aa1.62□□□□□ -2.15
CLK1-204ENST00000432425 C15orf56Q8N910 161 aa1.62□□□□□ -2.15
CLK1-204ENST00000432425 BPIFB6Q8NFQ5 453 aa1.62□□□□□ -2.15
CLK1-204ENST00000432425 OR10P1Q8NGE3 313 aa1.62□□□□□ -2.15
CLK1-204ENST00000432425 C15orf40Q8WUR7 153 aa1.62□□□□□ -2.15
CLK1-204ENST00000432425 PSMF1Q92530 271 aa1.62□□□□□ -2.15
CLK1-204ENST00000432425 RBMXL1Q96E39 390 aaKnown RBP1.62□□□□□ -2.15
CLK1-204ENST00000432425 LINC00526Q96FQ7 95 aa1.62□□□□□ -2.15
CLK1-204ENST00000432425 DSCR8Q96T75 97 aa1.62□□□□□ -2.15
CLK1-204ENST00000432425 TTTY13Q9BZ97 58 aa1.62□□□□□ -2.15
CLK1-204ENST00000432425 RPP21Q9H633 154 aaKnown RBP1.62□□□□□ -2.15
CLK1-204ENST00000432425 NAA60Q9H7X0 242 aa1.62□□□□□ -2.15
CLK1-204ENST00000432425 ZNF355PQ9NSJ1 428 aa1.62□□□□□ -2.15
CLK1-204ENST00000432425 TMEM106BQ9NUM4 274 aa1.62□□□□□ -2.15
CLK1-204ENST00000432425 TXNL4BQ9NX01 149 aaKnown RBP1.62□□□□□ -2.15
CLK1-204ENST00000432425 LINC00588Q9Y4M8 146 aa1.62□□□□□ -2.15
CLK1-204ENST00000432425 DNAJC15Q9Y5T4 150 aa1.62□□□□□ -2.15
CLK1-204ENST00000432425 KDM6AO15550 1401 aaPredicted RBP1.62□□□□□ -2.15
CLK1-204ENST00000432425 IQGAP3Q86VI3 1631 aa1.62□□□□□ -2.15
CLK1-204ENST00000432425 MROH1Q8NDA8 1641 aa1.62□□□□□ -2.15
CLK1-204ENST00000432425 STRCQ7RTU9 1775 aa1.62□□□□□ -2.15
CLK1-204ENST00000432425 DLC1Q96QB1 1528 aa1.62□□□□□ -2.15
CLK1-204ENST00000432425 ADGRB1O14514 1584 aa1.61□□□□□ -2.15
CLK1-204ENST00000432425 C3orf85A0A1B0GTC6 90 aa1.61□□□□□ -2.15
CLK1-204ENST00000432425 TMEM262E9PQX1 116 aa1.61□□□□□ -2.15
CLK1-204ENST00000432425 H3BT86 120 aa1.61□□□□□ -2.15
CLK1-204ENST00000432425 K7EP34 96 aa1.61□□□□□ -2.15
CLK1-204ENST00000432425 APOC4-APOC2K7ER74 178 aa1.61□□□□□ -2.15
CLK1-204ENST00000432425 NDUFB3O43676 98 aa1.61□□□□□ -2.15
CLK1-204ENST00000432425 OR1I1O60431 355 aa1.61□□□□□ -2.15
CLK1-204ENST00000432425 APOC2P02655 101 aa1.61□□□□□ -2.15
CLK1-204ENST00000432425 CD3DP04234 171 aa1.61□□□□□ -2.15
CLK1-204ENST00000432425 CGB3P0DN86 165 aa1.61□□□□□ -2.15
CLK1-204ENST00000432425 CGB7P0DN87 165 aa1.61□□□□□ -2.15
CLK1-204ENST00000432425 CRYGAP11844 174 aa1.61□□□□□ -2.15
CLK1-204ENST00000432425 TPT1P13693 172 aaKnown RBP1.61□□□□□ -2.15
CLK1-204ENST00000432425 S100A4P26447 101 aaKnown RBP1.61□□□□□ -2.15
CLK1-204ENST00000432425 CSN1S1P47710 185 aa1.61□□□□□ -2.15
CLK1-204ENST00000432425 EIF5AP63241 154 aaKnown RBP1.61□□□□□ -2.15
CLK1-204ENST00000432425 CCL20P78556 96 aa1.61□□□□□ -2.15
CLK1-204ENST00000432425 SS18Q15532 418 aa1.61□□□□□ -2.15
CLK1-204ENST00000432425 MIC13Q5XKP0 118 aa1.61□□□□□ -2.15
CLK1-204ENST00000432425 MORN3Q6PF18 240 aaPredicted RBP1.61□□□□□ -2.15
CLK1-204ENST00000432425 SOSTDC1Q6X4U4 206 aa1.61□□□□□ -2.15
CLK1-204ENST00000432425 SPATA12Q7Z6I5 190 aa1.61□□□□□ -2.15
CLK1-204ENST00000432425 MORN4Q8NDC4 146 aa1.61□□□□□ -2.15
CLK1-204ENST00000432425 OR5D16Q8NGK9 328 aa1.61□□□□□ -2.15
CLK1-204ENST00000432425 C10orf105Q8TEF2 133 aa1.61□□□□□ -2.15
CLK1-204ENST00000432425 C10orf82Q8WW14 230 aa1.61□□□□□ -2.15
CLK1-204ENST00000432425 ITLN2Q8WWU7 325 aaPredicted RBP1.61□□□□□ -2.15
CLK1-204ENST00000432425 S100ZQ8WXG8 99 aa1.61□□□□□ -2.15
CLK1-204ENST00000432425 HYLS1Q96M11 299 aa1.61□□□□□ -2.15
CLK1-204ENST00000432425 PRELID3AQ96N28 172 aa1.61□□□□□ -2.15
CLK1-204ENST00000432425 S100A13Q99584 98 aa1.61□□□□□ -2.15
CLK1-204ENST00000432425 SHANK2-AS3Q9BTD1 123 aa1.61□□□□□ -2.15
CLK1-204ENST00000432425 NPCDR1Q9BY65 106 aa1.61□□□□□ -2.15
CLK1-204ENST00000432425 C8orf17Q9NRJ1 99 aa1.61□□□□□ -2.15
CLK1-204ENST00000432425 SMCO4Q9NRQ5 59 aa1.61□□□□□ -2.15
CLK1-204ENST00000432425 RPL26L1Q9UNX3 145 aaKnown RBP1.61□□□□□ -2.15
CLK1-204ENST00000432425 PTPRFP10586 1907 aa1.61□□□□□ -2.15
CLK1-204ENST00000432425 NUMA1Q14980 2115 aa1.61□□□□□ -2.15
CLK1-204ENST00000432425 COL1A1P02452 1464 aaPredicted RBP1.61□□□□□ -2.15
CLK1-204ENST00000432425 CFTRP13569 1480 aa1.61□□□□□ -2.15
CLK1-204ENST00000432425 KIAA1549Q9HCM3 1950 aa1.61□□□□□ -2.15
CLK1-204ENST00000432425 SUPT6HQ7KZ85 1726 aaKnown RBP1.61□□□□□ -2.15
CLK1-204ENST00000432425 GREB1Q4ZG55 1949 aa1.61□□□□□ -2.15
CLK1-204ENST00000432425 COL18A1P39060 1754 aa1.61□□□□□ -2.15
CLK1-204ENST00000432425 FBN1P35555 2871 aaKnown RBP1.61□□□□□ -2.15
CLK1-204ENST00000432425 TRAV1-1A0A0B4J248 108 aa1.61□□□□□ -2.15
CLK1-204ENST00000432425 A0A1B0GVX0 72 aa1.61□□□□□ -2.15
CLK1-204ENST00000432425 LOC107986453A0A1B0GWG9 222 aa1.61□□□□□ -2.15
CLK1-204ENST00000432425 MCRIP1C9JLW8 97 aa1.61□□□□□ -2.15
CLK1-204ENST00000432425 LEPROTO15243 131 aa1.61□□□□□ -2.15
CLK1-204ENST00000432425 HIST1H2BKO60814 126 aa1.61□□□□□ -2.15
CLK1-204ENST00000432425 UBL3O95164 117 aa1.61□□□□□ -2.15
CLK1-204ENST00000432425 TRACP01848 142 aa1.61□□□□□ -2.15
CLK1-204ENST00000432425 HIST1H2BJP06899 126 aa1.61□□□□□ -2.15
CLK1-204ENST00000432425 CD7P09564 240 aa1.61□□□□□ -2.15
CLK1-204ENST00000432425 CD28P10747 220 aa1.61□□□□□ -2.15
CLK1-204ENST00000432425 SLC25A6P12236 298 aa1.61□□□□□ -2.15
CLK1-204ENST00000432425 HLA-DMBP28068 263 aa1.61□□□□□ -2.15
CLK1-204ENST00000432425 SNCAP37840 140 aa1.61□□□□□ -2.15
CLK1-204ENST00000432425 Q0VG73 95 aa1.61□□□□□ -2.15
CLK1-204ENST00000432425 FAM104BQ5XKR9 115 aa1.61□□□□□ -2.15
CLK1-204ENST00000432425 EIF5AL1Q6IS14 154 aaKnown RBP1.61□□□□□ -2.15
CLK1-204ENST00000432425 GUSBP11Q6P575 273 aa1.61□□□□□ -2.15
CLK1-204ENST00000432425 Q6ZS92 163 aa1.61□□□□□ -2.15
CLK1-204ENST00000432425 LINC00299Q6ZSB3 139 aa1.61□□□□□ -2.15
CLK1-204ENST00000432425 C7orf65Q6ZTY9 151 aa1.61□□□□□ -2.15
CLK1-204ENST00000432425 CLDND2Q8NHS1 167 aa1.61□□□□□ -2.15
CLK1-204ENST00000432425 TSLPQ969D9 159 aa1.61□□□□□ -2.15
CLK1-204ENST00000432425 PKMYT1Q99640 499 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms