RNA–Protein interactions for RNA: ENST00000431540.7

CDH13-203, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-203ENST00000431540 MCUBQ9NWR8 336 aa5.72□□□□□ -1.49
CDH13-203ENST00000431540 TRAV12-2A0A075B6T6 113 aa5.71□□□□□ -1.5
CDH13-203ENST00000431540 PMS2P5A8MQ11 134 aa5.71□□□□□ -1.5
CDH13-203ENST00000431540 SIVA1O15304 175 aa5.71□□□□□ -1.5
CDH13-203ENST00000431540 TSC22D2O75157 780 aa5.71□□□□□ -1.5
CDH13-203ENST00000431540 SLC25A5P05141 298 aaKnown RBP5.71□□□□□ -1.5
CDH13-203ENST00000431540 OR5G3P0C626 314 aa5.71□□□□□ -1.5
CDH13-203ENST00000431540 LINC00869P0C866 280 aa5.71□□□□□ -1.5
CDH13-203ENST00000431540 ANXA7P20073 488 aaKnown RBP5.71□□□□□ -1.5
CDH13-203ENST00000431540 TNFSF8P32971 234 aa5.71□□□□□ -1.5
CDH13-203ENST00000431540 LEPP41159 167 aa5.71□□□□□ -1.5
CDH13-203ENST00000431540 FGL1Q08830 312 aa5.71□□□□□ -1.5
CDH13-203ENST00000431540 FCN2Q15485 313 aa5.71□□□□□ -1.5
CDH13-203ENST00000431540 ANXA2RQ3ZCQ2 193 aa5.71□□□□□ -1.5
CDH13-203ENST00000431540 TMEM14EPQ6UXP3 125 aa5.71□□□□□ -1.5
CDH13-203ENST00000431540 TMEM182Q6ZP80 229 aaPredicted RBP5.71□□□□□ -1.5
CDH13-203ENST00000431540 ZNF546Q86UE3 836 aa5.71□□□□□ -1.5
CDH13-203ENST00000431540 TOMM5Q8N4H5 51 aa5.71□□□□□ -1.5
CDH13-203ENST00000431540 C12orf45Q8N5I9 185 aaPredicted RBP5.71□□□□□ -1.5
CDH13-203ENST00000431540 RNF182Q8N6D2 247 aa5.71□□□□□ -1.5
CDH13-203ENST00000431540 CHAC2Q8WUX2 184 aa5.71□□□□□ -1.5
CDH13-203ENST00000431540 MRPL53Q96EL3 112 aaKnown RBP5.71□□□□□ -1.5
CDH13-203ENST00000431540 LINC00477Q96M19 166 aa5.71□□□□□ -1.5
CDH13-203ENST00000431540 MRPS26Q9BYN8 205 aaKnown RBP5.71□□□□□ -1.5
CDH13-203ENST00000431540 NAA50Q9GZZ1 169 aaKnown RBP5.71□□□□□ -1.5
CDH13-203ENST00000431540 TRBV7-9A0A0J9YWB2 115 aa5.7□□□□□ -1.5
CDH13-203ENST00000431540 NAP1L6A6NFF2 107 aa5.7□□□□□ -1.5
CDH13-203ENST00000431540 GOSR2O14653 212 aa5.7□□□□□ -1.5
CDH13-203ENST00000431540 ZNF324O75467 553 aaPredicted RBP5.7□□□□□ -1.5
CDH13-203ENST00000431540 IAPPP10997 89 aa5.7□□□□□ -1.5
CDH13-203ENST00000431540 GATA2P23769 480 aaPredicted RBP5.7□□□□□ -1.5
CDH13-203ENST00000431540 RAB31Q13636 194 aa5.7□□□□□ -1.5
CDH13-203ENST00000431540 IBA57Q5T440 356 aaKnown RBP5.7□□□□□ -1.5
CDH13-203ENST00000431540 PATE2Q6UY27 113 aa5.7□□□□□ -1.5
CDH13-203ENST00000431540 Q6ZRN7 208 aaPredicted RBP5.7□□□□□ -1.5
CDH13-203ENST00000431540 IQCF2Q8IXL9 164 aa5.7□□□□□ -1.5
CDH13-203ENST00000431540 SAT2Q96F10 170 aaPredicted RBP5.7□□□□□ -1.5
CDH13-203ENST00000431540 ARV1Q9H2C2 271 aa5.7□□□□□ -1.5
CDH13-203ENST00000431540 PSENENQ9NZ42 101 aa5.7□□□□□ -1.5
CDH13-203ENST00000431540 MGAT4CQ9UBM8 478 aa5.7□□□□□ -1.5
CDH13-203ENST00000431540 PAIP2BQ9ULR5 123 aaKnown RBP5.7□□□□□ -1.5
CDH13-203ENST00000431540 PRELID1Q9Y255 219 aa5.7□□□□□ -1.5
CDH13-203ENST00000431540 LRP1BQ9NZR2 4599 aa5.7□□□□□ -1.5
CDH13-203ENST00000431540 IFNA5P01569 189 aa5.69□□□□□ -1.5
CDH13-203ENST00000431540 PRM2P04554 102 aa5.69□□□□□ -1.5
CDH13-203ENST00000431540 HOXB5P09067 269 aa5.69□□□□□ -1.5
CDH13-203ENST00000431540 INAFM2P0DMQ5 153 aa5.69□□□□□ -1.5
CDH13-203ENST00000431540 VAMP1P23763 118 aa5.69□□□□□ -1.5
CDH13-203ENST00000431540 ERVFC1-1P60608 527 aa5.69□□□□□ -1.5
CDH13-203ENST00000431540 PDE6HQ13956 83 aa5.69□□□□□ -1.5
CDH13-203ENST00000431540 SPCS2Q15005 226 aa5.69□□□□□ -1.5
CDH13-203ENST00000431540 Q6ZRG5 221 aa5.69□□□□□ -1.5
CDH13-203ENST00000431540 LINC00305Q7Z4B0 112 aa5.69□□□□□ -1.5
CDH13-203ENST00000431540 TMED4Q7Z7H5 227 aa5.69□□□□□ -1.5
CDH13-203ENST00000431540 ZNF431Q8TF32 576 aaPredicted RBP5.69□□□□□ -1.5
CDH13-203ENST00000431540 FRZBQ92765 325 aa5.69□□□□□ -1.5
CDH13-203ENST00000431540 PFDN5Q99471 154 aa5.69□□□□□ -1.5
CDH13-203ENST00000431540 SLIRPQ9GZT3 109 aaKnown RBP5.69□□□□□ -1.5
CDH13-203ENST00000431540 ARL6Q9H0F7 186 aa5.69□□□□□ -1.5
CDH13-203ENST00000431540 DNAJC4Q9NNZ3 241 aa5.69□□□□□ -1.5
CDH13-203ENST00000431540 PRR13Q9NZ81 148 aa5.69□□□□□ -1.5
CDH13-203ENST00000431540 TP53TG3Q9ULZ0 132 aa5.69□□□□□ -1.5
CDH13-203ENST00000431540 A0A096LPF7 62 aa5.68□□□□□ -1.5
CDH13-203ENST00000431540 SMIM18P0DKX4 95 aa5.68□□□□□ -1.5
CDH13-203ENST00000431540 IGLC2P0DOY2 106 aa5.68□□□□□ -1.5
CDH13-203ENST00000431540 HTN1P15515 57 aa5.68□□□□□ -1.5
CDH13-203ENST00000431540 PPP1R1AQ13522 171 aa5.68□□□□□ -1.5
CDH13-203ENST00000431540 MRPL23Q16540 153 aaKnown RBP5.68□□□□□ -1.5
CDH13-203ENST00000431540 GFI1BQ5VTD9 330 aa5.68□□□□□ -1.5
CDH13-203ENST00000431540 IGFL4Q6B9Z1 124 aa5.68□□□□□ -1.5
CDH13-203ENST00000431540 SH2D6Q7Z4S9 175 aa5.68□□□□□ -1.5
CDH13-203ENST00000431540 EIF4E3Q8N5X7 224 aaKnown RBP5.68□□□□□ -1.5
CDH13-203ENST00000431540 OR1L4Q8NGR5 311 aa5.68□□□□□ -1.5
CDH13-203ENST00000431540 TRIM63Q969Q1 353 aa5.68□□□□□ -1.5
CDH13-203ENST00000431540 VSIG2Q96IQ7 327 aa5.68□□□□□ -1.5
CDH13-203ENST00000431540 KRTAP1-5Q9BYS1 174 aa5.68□□□□□ -1.5
CDH13-203ENST00000431540 ZNF586Q9NXT0 402 aa5.68□□□□□ -1.5
CDH13-203ENST00000431540 PRO0255Q9UI72 69 aa5.68□□□□□ -1.5
CDH13-203ENST00000431540 APOBP04114 4563 aaKnown RBP5.67□□□□□ -1.5
CDH13-203ENST00000431540 TRGV2A0A075B6R0 118 aa5.67□□□□□ -1.5
CDH13-203ENST00000431540 GAGE12BA1L429 117 aa5.67□□□□□ -1.5
CDH13-203ENST00000431540 C9orf170A2RU37 121 aa5.67□□□□□ -1.5
CDH13-203ENST00000431540 SMCO3A2RU48 225 aa5.67□□□□□ -1.5
CDH13-203ENST00000431540 KLLNB2CW77 178 aa5.67□□□□□ -1.5
CDH13-203ENST00000431540 AGPAT2O15120 278 aa5.67□□□□□ -1.5
CDH13-203ENST00000431540 SPINK4O60575 86 aa5.67□□□□□ -1.5
CDH13-203ENST00000431540 GAGE7O76087 117 aa5.67□□□□□ -1.5
CDH13-203ENST00000431540 C1QBP02746 253 aa5.67□□□□□ -1.5
CDH13-203ENST00000431540 OR4E1P0C645 316 aa5.67□□□□□ -1.5
CDH13-203ENST00000431540 GAGE12FP0CL80 117 aa5.67□□□□□ -1.5
CDH13-203ENST00000431540 GAGE12GP0CL81 117 aa5.67□□□□□ -1.5
CDH13-203ENST00000431540 GAGE12IP0CL82 117 aa5.67□□□□□ -1.5
CDH13-203ENST00000431540 CRISP2P16562 243 aa5.67□□□□□ -1.5
CDH13-203ENST00000431540 XGP55808 180 aa5.67□□□□□ -1.5
CDH13-203ENST00000431540 LINC00315P59091 139 aa5.67□□□□□ -1.5
CDH13-203ENST00000431540 C10orf113Q5VZT2 155 aa5.67□□□□□ -1.5
CDH13-203ENST00000431540 C9orf47Q6ZRZ4 202 aa5.67□□□□□ -1.5
CDH13-203ENST00000431540 C10orf126Q8N4M7 172 aa5.67□□□□□ -1.5
CDH13-203ENST00000431540 TMEM37Q8WXS4 190 aa5.67□□□□□ -1.5
CDH13-203ENST00000431540 ST6GAL2Q96JF0 529 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms