RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 PTPRFP10586 1907 aa0.34□□□□□ -2.36
CDC40-204ENST00000431461 ZCCHC11Q5TAX3 1644 aaKnown RBP0.34□□□□□ -2.36
CDC40-204ENST00000431461 MUC5BQ9HC84 5762 aaPredicted RBP0.34□□□□□ -2.36
CDC40-204ENST00000431461 ASCC3Q8N3C0 2202 aaKnown RBP0.33□□□□□ -2.36
CDC40-204ENST00000431461 CD109Q6YHK3 1445 aa0.33□□□□□ -2.36
CDC40-204ENST00000431461 ERBINQ96RT1 1412 aa0.33□□□□□ -2.36
CDC40-204ENST00000431461 E5RI56 91 aa0.33□□□□□ -2.36
CDC40-204ENST00000431461 PPP5D1E7EU14 171 aa0.33□□□□□ -2.36
CDC40-204ENST00000431461 KPNA4O00629 521 aaPredicted RBP0.33□□□□□ -2.36
CDC40-204ENST00000431461 FAM107AO95990 144 aa0.33□□□□□ -2.36
CDC40-204ENST00000431461 IGHV3-30P01768 117 aa0.33□□□□□ -2.36
CDC40-204ENST00000431461 IGHV3-30-5P0DP03 117 aa0.33□□□□□ -2.36
CDC40-204ENST00000431461 SRP9P49458 86 aaKnown RBP0.33□□□□□ -2.36
CDC40-204ENST00000431461 GNG3P63215 75 aa0.33□□□□□ -2.36
CDC40-204ENST00000431461 C10orf99Q6UWK7 81 aa0.33□□□□□ -2.36
CDC40-204ENST00000431461 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.33□□□□□ -2.36
CDC40-204ENST00000431461 GGACTQ9BVM4 153 aa0.33□□□□□ -2.36
CDC40-204ENST00000431461 ZFC3H1O60293 1989 aaKnown RBP0.33□□□□□ -2.36
CDC40-204ENST00000431461 CASP8AP2Q9UKL3 1982 aa0.33□□□□□ -2.36
CDC40-204ENST00000431461 ADGBQ8N7X0 1667 aa0.33□□□□□ -2.36
CDC40-204ENST00000431461 HEATR1Q9H583 2144 aaKnown RBP0.32□□□□□ -2.36
CDC40-204ENST00000431461 TRAPPC8Q9Y2L5 1435 aa0.32□□□□□ -2.36
CDC40-204ENST00000431461 TRAV23DV6A0A075B6W5 121 aa0.32□□□□□ -2.36
CDC40-204ENST00000431461 ZNF727A8MUV8 499 aa0.32□□□□□ -2.36
CDC40-204ENST00000431461 SULT1C4O75897 302 aa0.32□□□□□ -2.36
CDC40-204ENST00000431461 CXCL1P09341 107 aa0.32□□□□□ -2.36
CDC40-204ENST00000431461 IDO1P14902 403 aa0.32□□□□□ -2.36
CDC40-204ENST00000431461 SPINK7P58062 85 aa0.32□□□□□ -2.36
CDC40-204ENST00000431461 DIAPH2-AS1Q14236 149 aa0.32□□□□□ -2.36
CDC40-204ENST00000431461 SPINK13Q1W4C9 94 aa0.32□□□□□ -2.36
CDC40-204ENST00000431461 GLIPR1L1Q6UWM5 242 aa0.32□□□□□ -2.36
CDC40-204ENST00000431461 TMEM14EPQ6UXP3 125 aa0.32□□□□□ -2.36
CDC40-204ENST00000431461 FOXI2Q6ZQN5 318 aa0.32□□□□□ -2.36
CDC40-204ENST00000431461 ANGPTL5Q86XS5 388 aa0.32□□□□□ -2.36
CDC40-204ENST00000431461 PRR15Q8IV56 129 aa0.32□□□□□ -2.36
CDC40-204ENST00000431461 FAM24BQ8N5W8 94 aa0.32□□□□□ -2.36
CDC40-204ENST00000431461 OR5AK2Q8NH90 309 aa0.32□□□□□ -2.36
CDC40-204ENST00000431461 OR4C12Q96R67 309 aa0.32□□□□□ -2.36
CDC40-204ENST00000431461 C19orf12Q9NSK7 152 aa0.32□□□□□ -2.36
CDC40-204ENST00000431461 IL20Q9NYY1 176 aa0.32□□□□□ -2.36
CDC40-204ENST00000431461 ATPIF1Q9UII2 106 aa0.32□□□□□ -2.36
CDC40-204ENST00000431461 DOCK4Q8N1I0 1966 aa0.32□□□□□ -2.36
CDC40-204ENST00000431461 C5orf58C9J3I9 102 aa0.31□□□□□ -2.36
CDC40-204ENST00000431461 E7EQ34 232 aa0.31□□□□□ -2.36
CDC40-204ENST00000431461 TRACP01848 142 aa0.31□□□□□ -2.36
CDC40-204ENST00000431461 SAA1P0DJI8 122 aaPredicted RBP0.31□□□□□ -2.36
CDC40-204ENST00000431461 FABP4P15090 132 aa0.31□□□□□ -2.36
CDC40-204ENST00000431461 PDE6GP18545 87 aa0.31□□□□□ -2.36
CDC40-204ENST00000431461 KDELR1P24390 212 aa0.31□□□□□ -2.36
CDC40-204ENST00000431461 SERPINB1P30740 379 aa0.31□□□□□ -2.36
CDC40-204ENST00000431461 INSL3P51460 131 aa0.31□□□□□ -2.36
CDC40-204ENST00000431461 ZNF137PP52743 207 aa0.31□□□□□ -2.36
CDC40-204ENST00000431461 DNAJB13P59910 316 aa0.31□□□□□ -2.36
CDC40-204ENST00000431461 MIR22HGQ0VDD5 57 aa0.31□□□□□ -2.36
CDC40-204ENST00000431461 SNCBQ16143 134 aa0.31□□□□□ -2.36
CDC40-204ENST00000431461 VMA21Q3ZAQ7 101 aa0.31□□□□□ -2.36
CDC40-204ENST00000431461 OCIAD2Q56VL3 154 aa0.31□□□□□ -2.36
CDC40-204ENST00000431461 TRIQKQ629K1 86 aa0.31□□□□□ -2.36
CDC40-204ENST00000431461 C3orf33Q6P1S2 294 aa0.31□□□□□ -2.36
CDC40-204ENST00000431461 RMND5BQ96G75 393 aaPredicted RBP0.31□□□□□ -2.36
CDC40-204ENST00000431461 CCDC32Q9BV29 185 aa0.31□□□□□ -2.36
CDC40-204ENST00000431461 ZNF469Q96JG9 3925 aaPredicted RBP0.31□□□□□ -2.36
CDC40-204ENST00000431461 COL24A1Q17RW2 1714 aa0.3□□□□□ -2.36
CDC40-204ENST00000431461 ARL5CA6NH57 179 aa0.3□□□□□ -2.36
CDC40-204ENST00000431461 B4DSR2 109 aa0.3□□□□□ -2.36
CDC40-204ENST00000431461 C5orf67F2Z3F1 127 aa0.3□□□□□ -2.36
CDC40-204ENST00000431461 MT-ND6P03923 174 aa0.3□□□□□ -2.36
CDC40-204ENST00000431461 GYPBP06028 91 aa0.3□□□□□ -2.36
CDC40-204ENST00000431461 BCL2P10415 239 aa0.3□□□□□ -2.36
CDC40-204ENST00000431461 TPT1P13693 172 aaKnown RBP0.3□□□□□ -2.36
CDC40-204ENST00000431461 CAV3P56539 151 aa0.3□□□□□ -2.36
CDC40-204ENST00000431461 FXYD4P59646 89 aa0.3□□□□□ -2.36
CDC40-204ENST00000431461 DCUN1D2Q6PH85 259 aa0.3□□□□□ -2.36
CDC40-204ENST00000431461 IZUMO2Q6UXV1 221 aa0.3□□□□□ -2.36
CDC40-204ENST00000431461 CASC2Q6XLA1 102 aa0.3□□□□□ -2.36
CDC40-204ENST00000431461 LYG2Q86SG7 212 aa0.3□□□□□ -2.36
CDC40-204ENST00000431461 CCL4L1Q8NHW4 92 aa0.3□□□□□ -2.36
CDC40-204ENST00000431461 BORCS8Q96FH0 119 aa0.3□□□□□ -2.36
CDC40-204ENST00000431461 CIB3Q96Q77 187 aaPredicted RBP0.3□□□□□ -2.36
CDC40-204ENST00000431461 MED11Q9P086 117 aa0.3□□□□□ -2.36
CDC40-204ENST00000431461 UFC1Q9Y3C8 167 aa0.3□□□□□ -2.36
CDC40-204ENST00000431461 MYO5AQ9Y4I1 1855 aaKnown RBP0.29□□□□□ -2.36
CDC40-204ENST00000431461 A0A0D9SG42 100 aa0.29□□□□□ -2.36
CDC40-204ENST00000431461 C9orf170A2RU37 121 aa0.29□□□□□ -2.36
CDC40-204ENST00000431461 PRORSD1PA6NEY8 169 aa0.29□□□□□ -2.36
CDC40-204ENST00000431461 IFITM5A6NNB3 132 aa0.29□□□□□ -2.36
CDC40-204ENST00000431461 BBIP1A8MTZ0 92 aa0.29□□□□□ -2.36
CDC40-204ENST00000431461 TAS2R41P59536 307 aa0.29□□□□□ -2.36
CDC40-204ENST00000431461 C3orf62Q6ZUJ4 267 aa0.29□□□□□ -2.36
CDC40-204ENST00000431461 LINC00269Q8N2A0 174 aa0.29□□□□□ -2.36
CDC40-204ENST00000431461 DYDC1Q8WWB3 177 aa0.29□□□□□ -2.36
CDC40-204ENST00000431461 DIRC1Q969H9 104 aa0.29□□□□□ -2.36
CDC40-204ENST00000431461 LXNQ9BS40 222 aa0.29□□□□□ -2.36
CDC40-204ENST00000431461 LPAR5Q9H1C0 372 aa0.29□□□□□ -2.36
CDC40-204ENST00000431461 CENPHQ9H3R5 247 aa0.29□□□□□ -2.36
CDC40-204ENST00000431461 NAT8BQ9UHF3 227 aa0.29□□□□□ -2.36
CDC40-204ENST00000431461 V9GYQ6 96 aa0.29□□□□□ -2.36
CDC40-204ENST00000431461 CITO14578 2027 aa0.29□□□□□ -2.36
CDC40-204ENST00000431461 MGAMO43451 1857 aa0.29□□□□□ -2.36
CDC40-204ENST00000431461 NUP210LQ5VU65 1888 aa0.29□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms