RNA–Protein interactions for RNA: ENST00000431357.1

USP4-205, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 5

Gene USP4, Length 2,141 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-205ENST00000431357 CD5LO43866 347 aa8.85□□□□□ -0.99
USP4-205ENST00000431357 CRYBA4P53673 196 aa8.85□□□□□ -0.99
USP4-205ENST00000431357 KLF17Q5JT82 389 aaPredicted RBP8.85□□□□□ -0.99
USP4-205ENST00000431357 DPF1Q92782 380 aa8.85□□□□□ -0.99
USP4-205ENST00000431357 C8orf49Q96NF6 230 aa8.85□□□□□ -0.99
USP4-205ENST00000431357 SH2D1AO60880 128 aa8.84□□□□□ -0.99
USP4-205ENST00000431357 SRSF2Q01130 221 aaKnown RBP8.84□□□□□ -0.99
USP4-205ENST00000431357 HIST1H1AQ02539 215 aaPredicted RBP8.84□□□□□ -0.99
USP4-205ENST00000431357 MPV17L2Q567V2 206 aa8.84□□□□□ -0.99
USP4-205ENST00000431357 FAM104BQ5XKR9 115 aa8.84□□□□□ -0.99
USP4-205ENST00000431357 LYZL1Q6UWQ5 148 aa8.84□□□□□ -0.99
USP4-205ENST00000431357 TPPP3Q9BW30 176 aa8.84□□□□□ -0.99
USP4-205ENST00000431357 F8W735 103 aaPredicted RBP8.84□□□□□ -0.99
USP4-205ENST00000431357 EBI3Q14213 229 aa8.84□□□□□ -0.99
USP4-205ENST00000431357 MINOS1Q5TGZ0 78 aa8.84□□□□□ -0.99
USP4-205ENST00000431357 ORMDL3Q8N138 153 aa8.84□□□□□ -0.99
USP4-205ENST00000431357 Q8N6K4 173 aa8.84□□□□□ -0.99
USP4-205ENST00000431357 MINOS1-NBL1R4GNA1 71 aa8.84□□□□□ -0.99
USP4-205ENST00000431357 NUDT3O95989 172 aa8.83□□□□□ -1
USP4-205ENST00000431357 RAB9AP51151 201 aa8.83□□□□□ -1
USP4-205ENST00000431357 KLRD1Q13241 179 aa8.83□□□□□ -1
USP4-205ENST00000431357 BVES-AS1Q5T3Y7 98 aa8.83□□□□□ -1
USP4-205ENST00000431357 AMMECR1LQ6DCA0 310 aa8.83□□□□□ -1
USP4-205ENST00000431357 Q6ZVH6 145 aa8.83□□□□□ -1
USP4-205ENST00000431357 NEGR1Q7Z3B1 354 aa8.83□□□□□ -1
USP4-205ENST00000431357 PRELID3AQ96N28 172 aa8.83□□□□□ -1
USP4-205ENST00000431357 PRR25Q96S07 402 aa8.83□□□□□ -1
USP4-205ENST00000431357 RABAC1Q9UI14 185 aa8.83□□□□□ -1
USP4-205ENST00000431357 CEP250Q9BV73 2442 aa8.83□□□□□ -1
USP4-205ENST00000431357 COX8AP10176 69 aa8.83□□□□□ -1
USP4-205ENST00000431357 CKS1BP61024 79 aa8.83□□□□□ -1
USP4-205ENST00000431357 ASCL2Q99929 193 aa8.83□□□□□ -1
USP4-205ENST00000431357 S4R3C0 116 aa8.83□□□□□ -1
USP4-205ENST00000431357 TTC28Q96AY4 2481 aa8.82□□□□□ -1
USP4-205ENST00000431357 TRAV26-1A0A087WT03 109 aa8.82□□□□□ -1
USP4-205ENST00000431357 NCBP2LA6PVI3 153 aaKnown RBP8.82□□□□□ -1
USP4-205ENST00000431357 D6R8Y8 96 aa8.82□□□□□ -1
USP4-205ENST00000431357 IFI27P40305 119 aaPredicted RBP8.82□□□□□ -1
USP4-205ENST00000431357 VMO1Q7Z5L0 202 aa8.82□□□□□ -1
USP4-205ENST00000431357 OR1N2Q8NGR9 330 aa8.82□□□□□ -1
USP4-205ENST00000431357 PGPEP1Q9NXJ5 209 aa8.82□□□□□ -1
USP4-205ENST00000431357 SIGLEC8Q9NYZ4 499 aa8.82□□□□□ -1
USP4-205ENST00000431357 OR11H12B2RN74 326 aa8.81□□□□□ -1
USP4-205ENST00000431357 CCL21O00585 134 aa8.81□□□□□ -1
USP4-205ENST00000431357 GRNP28799 593 aaKnown RBP8.81□□□□□ -1
USP4-205ENST00000431357 FOXC1Q12948 553 aa8.81□□□□□ -1
USP4-205ENST00000431357 LGALS9BQ3B8N2 356 aa8.81□□□□□ -1
USP4-205ENST00000431357 LGALS9CQ6DKI2 356 aa8.81□□□□□ -1
USP4-205ENST00000431357 C11orf71Q6IPW1 123 aa8.81□□□□□ -1
USP4-205ENST00000431357 BCL6BQ8N143 479 aaPredicted RBP8.81□□□□□ -1
USP4-205ENST00000431357 OR11H1Q8NG94 326 aa8.81□□□□□ -1
USP4-205ENST00000431357 OR11H2Q8NH07 326 aa8.81□□□□□ -1
USP4-205ENST00000431357 TIMM8BQ9Y5J9 83 aaPredicted RBP8.81□□□□□ -1
USP4-205ENST00000431357 PCNX1Q96RV3 2341 aa8.81□□□□□ -1
USP4-205ENST00000431357 IGKV2-40A0A087WW87 121 aaPredicted RBP8.81□□□□□ -1
USP4-205ENST00000431357 TMSB15BA0A087X1C1 80 aa8.81□□□□□ -1
USP4-205ENST00000431357 TMEM213A2RRL7 107 aa8.81□□□□□ -1
USP4-205ENST00000431357 GAGE10A6NGK3 116 aa8.81□□□□□ -1
USP4-205ENST00000431357 SAP30O75446 220 aa8.81□□□□□ -1
USP4-205ENST00000431357 IGKV2D-40P01614 121 aaPredicted RBP8.81□□□□□ -1
USP4-205ENST00000431357 CTSGP08311 255 aa8.81□□□□□ -1
USP4-205ENST00000431357 AZU1P20160 251 aa8.81□□□□□ -1
USP4-205ENST00000431357 GPR183P32249 361 aa8.81□□□□□ -1
USP4-205ENST00000431357 NDPQ00604 133 aa8.81□□□□□ -1
USP4-205ENST00000431357 MRPL51Q4U2R6 128 aaKnown RBP8.81□□□□□ -1
USP4-205ENST00000431357 UFSP1Q6NVU6 142 aa8.81□□□□□ -1
USP4-205ENST00000431357 AMN1Q8IY45 258 aa8.81□□□□□ -1
USP4-205ENST00000431357 NPFFR1Q9GZQ6 430 aa8.81□□□□□ -1
USP4-205ENST00000431357 CFAP47Q6ZTR5 3102 aa8.81□□□□□ -1
USP4-205ENST00000431357 HBDP02042 147 aa8.8□□□□□ -1
USP4-205ENST00000431357 A0A096LNJ9 63 aa8.8□□□□□ -1
USP4-205ENST00000431357 A0A1W2PRD5 423 aa8.8□□□□□ -1
USP4-205ENST00000431357 A0A1W2PRF3 423 aa8.8□□□□□ -1
USP4-205ENST00000431357 A0A1W2PRM7 423 aa8.8□□□□□ -1
USP4-205ENST00000431357 OR2T8A6NH00 312 aa8.8□□□□□ -1
USP4-205ENST00000431357 LY6HO94772 140 aa8.8□□□□□ -1
USP4-205ENST00000431357 IGLC6P0CF74 106 aa8.8□□□□□ -1
USP4-205ENST00000431357 EGR2P11161 476 aaPredicted RBP8.8□□□□□ -1
USP4-205ENST00000431357 KLK9Q2XQG4 91 aa8.8□□□□□ -1
USP4-205ENST00000431357 MRAP2Q96G30 205 aa8.8□□□□□ -1
USP4-205ENST00000431357 MCRIP2Q9BUT9 160 aaKnown RBP8.8□□□□□ -1
USP4-205ENST00000431357 KLK9Q9UKQ9 250 aa8.8□□□□□ -1
USP4-205ENST00000431357 SMAD5-AS1Q9Y6J3 95 aa8.8□□□□□ -1
USP4-205ENST00000431357 ASPMQ8IZT6 3477 aa8.79□□□□□ -1
USP4-205ENST00000431357 A0A087X0K7 114 aa8.79□□□□□ -1
USP4-205ENST00000431357 LOC389332A0A1B0GUA5 103 aa8.79□□□□□ -1
USP4-205ENST00000431357 TSPAN13O95857 204 aa8.79□□□□□ -1
USP4-205ENST00000431357 CKS2P33552 79 aa8.79□□□□□ -1
USP4-205ENST00000431357 TWIST1Q15672 202 aa8.79□□□□□ -1
USP4-205ENST00000431357 OR5A1Q8NGJ0 315 aa8.79□□□□□ -1
USP4-205ENST00000431357 FAM110DQ8TAY7 271 aaPredicted RBP8.79□□□□□ -1
USP4-205ENST00000431357 ACACAQ13085 2346 aa8.79□□□□□ -1
USP4-205ENST00000431357 POLEQ07864 2286 aa8.79□□□□□ -1
USP4-205ENST00000431357 IGHV7-81A0A0B4J1V7 117 aa8.78□□□□□ -1
USP4-205ENST00000431357 MUC21A0A0G2JKD1 596 aa8.78□□□□□ -1
USP4-205ENST00000431357 MUC21A0A140T8X8 626 aa8.78□□□□□ -1
USP4-205ENST00000431357 FABP5P3A8MUU1 101 aa8.78□□□□□ -1
USP4-205ENST00000431357 J3QR89 54 aa8.78□□□□□ -1
USP4-205ENST00000431357 NCR2O95944 276 aa8.78□□□□□ -1
USP4-205ENST00000431357 FAM106CPP0CH98 169 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms