RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 OSTCQ9NRP0 149 aa12.87□□□□□ -0.35
USHBP1-203ENST00000431146 RNF24Q9Y225 148 aa12.87□□□□□ -0.35
USHBP1-203ENST00000431146 AKAP9Q99996 3911 aa12.87□□□□□ -0.35
USHBP1-203ENST00000431146 RPL7P18124 248 aaKnown RBP12.86□□□□□ -0.35
USHBP1-203ENST00000431146 RPEL1Q2QD12 228 aa12.86□□□□□ -0.35
USHBP1-203ENST00000431146 FMC1Q96HJ9 113 aa12.86□□□□□ -0.35
USHBP1-203ENST00000431146 GPR82Q96P67 336 aa12.86□□□□□ -0.35
USHBP1-203ENST00000431146 ZNF705GA8MUZ8 300 aaPredicted RBP12.86□□□□□ -0.35
USHBP1-203ENST00000431146 SPINK4O60575 86 aa12.86□□□□□ -0.35
USHBP1-203ENST00000431146 RPLP1P05386 114 aaKnown RBP12.86□□□□□ -0.35
USHBP1-203ENST00000431146 ARL3P36405 182 aa12.86□□□□□ -0.35
USHBP1-203ENST00000431146 C10orf99Q6UWK7 81 aa12.86□□□□□ -0.35
USHBP1-203ENST00000431146 PRNTQ86SH4 94 aa12.86□□□□□ -0.35
USHBP1-203ENST00000431146 DUX5Q96PT3 197 aa12.86□□□□□ -0.35
USHBP1-203ENST00000431146 HOXA3O43365 443 aaPredicted RBP12.85□□□□□ -0.35
USHBP1-203ENST00000431146 LTAP01374 205 aa12.85□□□□□ -0.35
USHBP1-203ENST00000431146 IGLV2-11P01706 119 aa12.85□□□□□ -0.35
USHBP1-203ENST00000431146 FRMD6-AS1P0C7T7 363 aa12.85□□□□□ -0.35
USHBP1-203ENST00000431146 SLC35B1P78383 322 aa12.85□□□□□ -0.35
USHBP1-203ENST00000431146 LINC00322Q6ZN03 302 aaPredicted RBP12.85□□□□□ -0.35
USHBP1-203ENST00000431146 BUB3O43684 328 aa12.85□□□□□ -0.35
USHBP1-203ENST00000431146 TYMSP04818 313 aa12.85□□□□□ -0.35
USHBP1-203ENST00000431146 DMRTA1Q5VZB9 504 aa12.85□□□□□ -0.35
USHBP1-203ENST00000431146 Q6YL49 198 aa12.85□□□□□ -0.35
USHBP1-203ENST00000431146 Q86TA4 180 aa12.85□□□□□ -0.35
USHBP1-203ENST00000431146 NUDT10Q8NFP7 164 aa12.85□□□□□ -0.35
USHBP1-203ENST00000431146 NUDT11Q96G61 164 aa12.85□□□□□ -0.35
USHBP1-203ENST00000431146 VPREB3Q9UKI3 123 aa12.85□□□□□ -0.35
USHBP1-203ENST00000431146 ACANP16112 2415 aa12.85□□□□□ -0.35
USHBP1-203ENST00000431146 CUBNO60494 3623 aa12.84□□□□□ -0.35
USHBP1-203ENST00000431146 IGLV1-40P01703 118 aa12.84□□□□□ -0.35
USHBP1-203ENST00000431146 HLA-DMBP28068 263 aa12.84□□□□□ -0.35
USHBP1-203ENST00000431146 CFHR3Q02985 330 aa12.84□□□□□ -0.35
USHBP1-203ENST00000431146 LYPD1Q8N2G4 141 aa12.84□□□□□ -0.35
USHBP1-203ENST00000431146 MLST8Q9BVC4 326 aa12.84□□□□□ -0.35
USHBP1-203ENST00000431146 AAMDCQ9H7C9 122 aa12.84□□□□□ -0.35
USHBP1-203ENST00000431146 RAB9AP51151 201 aa12.83□□□□□ -0.35
USHBP1-203ENST00000431146 PDE6HQ13956 83 aa12.83□□□□□ -0.35
USHBP1-203ENST00000431146 C9orf139Q6ZV77 190 aa12.83□□□□□ -0.35
USHBP1-203ENST00000431146 HECTD1Q9ULT8 2610 aa12.83□□□□□ -0.36
USHBP1-203ENST00000431146 DIRC3C9JPN6 131 aa12.83□□□□□ -0.36
USHBP1-203ENST00000431146 H3BUA1 57 aa12.83□□□□□ -0.36
USHBP1-203ENST00000431146 PPBPP02775 128 aa12.83□□□□□ -0.36
USHBP1-203ENST00000431146 ACTL10Q5JWF8 245 aa12.83□□□□□ -0.36
USHBP1-203ENST00000431146 UNQ9165/PRO28630Q6UXU0 137 aa12.83□□□□□ -0.36
USHBP1-203ENST00000431146 HIST3H2BBQ8N257 126 aa12.83□□□□□ -0.36
USHBP1-203ENST00000431146 OR4X2Q8NGF9 303 aa12.83□□□□□ -0.36
USHBP1-203ENST00000431146 METTL26Q96S19 204 aa12.83□□□□□ -0.36
USHBP1-203ENST00000431146 USMG5Q96IX5 58 aa12.82□□□□□ -0.36
USHBP1-203ENST00000431146 ZNF785A8K8V0 405 aa12.82□□□□□ -0.36
USHBP1-203ENST00000431146 JOSD1Q15040 202 aaPredicted RBP12.82□□□□□ -0.36
USHBP1-203ENST00000431146 GFI1BQ5VTD9 330 aa12.82□□□□□ -0.36
USHBP1-203ENST00000431146 TRAPPC1Q9Y5R8 145 aa12.82□□□□□ -0.36
USHBP1-203ENST00000431146 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.81□□□□□ -0.36
USHBP1-203ENST00000431146 ZNF705FA8MVS1 300 aaPredicted RBP12.81□□□□□ -0.36
USHBP1-203ENST00000431146 CBLN1P23435 193 aa12.81□□□□□ -0.36
USHBP1-203ENST00000431146 FAM231DQ6ZW35 169 aa12.81□□□□□ -0.36
USHBP1-203ENST00000431146 BTF3L4Q96K17 158 aa12.81□□□□□ -0.36
USHBP1-203ENST00000431146 FASNP49327 2511 aaKnown RBP12.81□□□□□ -0.36
USHBP1-203ENST00000431146 MYO9AB2RTY4 2548 aa12.81□□□□□ -0.36
USHBP1-203ENST00000431146 IGKV2-40A0A087WW87 121 aaPredicted RBP12.8□□□□□ -0.36
USHBP1-203ENST00000431146 K7EP13 123 aa12.8□□□□□ -0.36
USHBP1-203ENST00000431146 BRI3O95415 125 aa12.8□□□□□ -0.36
USHBP1-203ENST00000431146 IGKV2D-40P01614 121 aaPredicted RBP12.8□□□□□ -0.36
USHBP1-203ENST00000431146 PSG9Q00887 426 aa12.8□□□□□ -0.36
USHBP1-203ENST00000431146 PDZD11Q5EBL8 140 aa12.8□□□□□ -0.36
USHBP1-203ENST00000431146 TMEM75Q8N9X5 138 aa12.8□□□□□ -0.36
USHBP1-203ENST00000431146 SMIM27A0A1W2PRY6 76 aa12.8□□□□□ -0.36
USHBP1-203ENST00000431146 IGHG4P01861 327 aa12.8□□□□□ -0.36
USHBP1-203ENST00000431146 S100A7P31151 101 aa12.8□□□□□ -0.36
USHBP1-203ENST00000431146 PSG3Q16557 428 aa12.8□□□□□ -0.36
USHBP1-203ENST00000431146 TMEM183AQ8IXX5 376 aa12.8□□□□□ -0.36
USHBP1-203ENST00000431146 ZNF664Q8N3J9 261 aa12.8□□□□□ -0.36
USHBP1-203ENST00000431146 RNF182Q8N6D2 247 aa12.8□□□□□ -0.36
USHBP1-203ENST00000431146 ATP6V0BQ99437 205 aa12.8□□□□□ -0.36
USHBP1-203ENST00000431146 PSG8Q9UQ74 426 aa12.8□□□□□ -0.36
USHBP1-203ENST00000431146 K7EQM0 130 aa12.79□□□□□ -0.36
USHBP1-203ENST00000431146 MRPL54Q6P161 138 aaKnown RBP12.79□□□□□ -0.36
USHBP1-203ENST00000431146 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.79□□□□□ -0.36
USHBP1-203ENST00000431146 SIGLECL1Q8N7X8 197 aa12.79□□□□□ -0.36
USHBP1-203ENST00000431146 RNASE8Q8TDE3 154 aaKnown RBP12.79□□□□□ -0.36
USHBP1-203ENST00000431146 SMIM12Q96EX1 92 aa12.79□□□□□ -0.36
USHBP1-203ENST00000431146 ZNF331Q9NQX6 463 aaPredicted RBP12.79□□□□□ -0.36
USHBP1-203ENST00000431146 PSMB8P28062 276 aa12.79□□□□□ -0.36
USHBP1-203ENST00000431146 CSN1S1P47710 185 aa12.79□□□□□ -0.36
USHBP1-203ENST00000431146 ZC2HC1AQ96GY0 325 aa12.79□□□□□ -0.36
USHBP1-203ENST00000431146 A0A0G2JLM5 398 aa12.78□□□□□ -0.36
USHBP1-203ENST00000431146 TMEM238C9JI98 176 aa12.78□□□□□ -0.36
USHBP1-203ENST00000431146 CHEK1O14757 476 aa12.78□□□□□ -0.36
USHBP1-203ENST00000431146 GRAMD2BQ96HH9 432 aa12.78□□□□□ -0.36
USHBP1-203ENST00000431146 C8orf49Q96NF6 230 aa12.78□□□□□ -0.36
USHBP1-203ENST00000431146 ZNF702PQ9H963 129 aa12.78□□□□□ -0.36
USHBP1-203ENST00000431146 SELENOKQ9Y6D0 94 aa12.78□□□□□ -0.36
USHBP1-203ENST00000431146 U3KQE9 123 aa12.78□□□□□ -0.36
USHBP1-203ENST00000431146 TRAV9-1A0A075B6T8 112 aa12.77□□□□□ -0.36
USHBP1-203ENST00000431146 C19orf71A6NCJ1 209 aa12.77□□□□□ -0.36
USHBP1-203ENST00000431146 PRSS22Q9GZN4 317 aa12.77□□□□□ -0.36
USHBP1-203ENST00000431146 NF1P21359 2839 aa12.77□□□□□ -0.36
USHBP1-203ENST00000431146 NDUFA4O00483 81 aa12.77□□□□□ -0.37
USHBP1-203ENST00000431146 P01737 135 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms