RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 Q8N1Y9 231 aa8.17□□□□□ -1.1
CHD4-202ENST00000430771 DEFB125Q8N687 156 aa8.17□□□□□ -1.1
CHD4-202ENST00000430771 ARL6IP6Q8N6S5 226 aa8.17□□□□□ -1.1
CHD4-202ENST00000430771 C5orf17Q8NAS9 161 aa8.17□□□□□ -1.1
CHD4-202ENST00000430771 RPUSD4Q96CM3 377 aaKnown RBP8.17□□□□□ -1.1
CHD4-202ENST00000430771 TCEAL7Q9BRU2 100 aa8.17□□□□□ -1.1
CHD4-202ENST00000430771 SAV1Q9H4B6 383 aaPredicted RBP8.17□□□□□ -1.1
CHD4-202ENST00000430771 TUBA4BQ9H853 241 aa8.17□□□□□ -1.1
CHD4-202ENST00000430771 HLA-DRB4X5D2U9 266 aa8.17□□□□□ -1.1
CHD4-202ENST00000430771 SERTM2A0A1B0GWG4 89 aa8.16□□□□□ -1.1
CHD4-202ENST00000430771 FAM74A7A6NL05 159 aa8.16□□□□□ -1.1
CHD4-202ENST00000430771 A8MZ25 164 aa8.16□□□□□ -1.1
CHD4-202ENST00000430771 GGTLC3B5MD39 225 aa8.16□□□□□ -1.1
CHD4-202ENST00000430771 M0R3E3 92 aa8.16□□□□□ -1.1
CHD4-202ENST00000430771 DUSP14O95147 198 aaKnown RBP8.16□□□□□ -1.1
CHD4-202ENST00000430771 SLC25A5P05141 298 aaKnown RBP8.16□□□□□ -1.1
CHD4-202ENST00000430771 IGHV4-30-4P0DP06 118 aa8.16□□□□□ -1.1
CHD4-202ENST00000430771 NOTCH1P46531 2555 aa8.16□□□□□ -1.1
CHD4-202ENST00000430771 RAB14P61106 215 aa8.16□□□□□ -1.1
CHD4-202ENST00000430771 HIST1H1AQ02539 215 aaPredicted RBP8.16□□□□□ -1.1
CHD4-202ENST00000430771 ACTL10Q5JWF8 245 aa8.16□□□□□ -1.1
CHD4-202ENST00000430771 OR8A1Q8NGG7 326 aa8.16□□□□□ -1.1
CHD4-202ENST00000430771 OR10J6PQ8NGY7 276 aa8.16□□□□□ -1.1
CHD4-202ENST00000430771 TXNDC17Q9BRA2 123 aa8.16□□□□□ -1.1
CHD4-202ENST00000430771 GNG13Q9P2W3 67 aa8.16□□□□□ -1.1
CHD4-202ENST00000430771 A0A0J9YX75 114 aa8.15□□□□□ -1.1
CHD4-202ENST00000430771 PGPA6NDG6 321 aa8.15□□□□□ -1.1
CHD4-202ENST00000430771 KNCNA6PVL3 124 aa8.15□□□□□ -1.1
CHD4-202ENST00000430771 K7EIL1 84 aa8.15□□□□□ -1.1
CHD4-202ENST00000430771 K7EQM0 130 aa8.15□□□□□ -1.1
CHD4-202ENST00000430771 PRB2P02812 416 aaPredicted RBP8.15□□□□□ -1.1
CHD4-202ENST00000430771 ZNF124Q15973 351 aa8.15□□□□□ -1.1
CHD4-202ENST00000430771 CST9LP1Q5W188 147 aa8.15□□□□□ -1.1
CHD4-202ENST00000430771 MRAPQ8TCY5 172 aa8.15□□□□□ -1.1
CHD4-202ENST00000430771 RPH3ALQ9UNE2 315 aa8.15□□□□□ -1.1
CHD4-202ENST00000430771 YTHDF2Q9Y5A9 579 aaKnown RBP8.15□□□□□ -1.1
CHD4-202ENST00000430771 LOC102724200A0A096LPH7 203 aaPredicted RBP8.14□□□□□ -1.11
CHD4-202ENST00000430771 RBAKDNA6NC62 111 aa8.14□□□□□ -1.11
CHD4-202ENST00000430771 ZNF705FA8MVS1 300 aaPredicted RBP8.14□□□□□ -1.11
CHD4-202ENST00000430771 C11orf94C9JXX5 98 aa8.14□□□□□ -1.11
CHD4-202ENST00000430771 F6UZH7 168 aa8.14□□□□□ -1.11
CHD4-202ENST00000430771 PAGE4O60829 102 aa8.14□□□□□ -1.11
CHD4-202ENST00000430771 NMBP08949 121 aa8.14□□□□□ -1.11
CHD4-202ENST00000430771 BCL2P10415 239 aa8.14□□□□□ -1.11
CHD4-202ENST00000430771 APOC4P55056 127 aa8.14□□□□□ -1.11
CHD4-202ENST00000430771 NUTF2P61970 127 aaKnown RBP8.14□□□□□ -1.11
CHD4-202ENST00000430771 SUMO1P63165 101 aaKnown RBP8.14□□□□□ -1.11
CHD4-202ENST00000430771 PMS2P11Q13670 270 aa8.14□□□□□ -1.11
CHD4-202ENST00000430771 TRPT1Q86TN4 253 aaKnown RBP8.14□□□□□ -1.11
CHD4-202ENST00000430771 LYPD6BQ8NI32 183 aa8.14□□□□□ -1.11
CHD4-202ENST00000430771 HIST1H2BAQ96A08 127 aa8.14□□□□□ -1.11
CHD4-202ENST00000430771 CITED4Q96RK1 184 aa8.14□□□□□ -1.11
CHD4-202ENST00000430771 ATG101Q9BSB4 218 aa8.14□□□□□ -1.11
CHD4-202ENST00000430771 FBLL1A6NHQ2 334 aaKnown RBP8.13□□□□□ -1.11
CHD4-202ENST00000430771 DIRC3C9JPN6 131 aa8.13□□□□□ -1.11
CHD4-202ENST00000430771 NPIPB6E9PJ23 425 aa8.13□□□□□ -1.11
CHD4-202ENST00000430771 F6UB75 175 aa8.13□□□□□ -1.11
CHD4-202ENST00000430771 H3BMM0 161 aa8.13□□□□□ -1.11
CHD4-202ENST00000430771 TCRAP04437 139 aa8.13□□□□□ -1.11
CHD4-202ENST00000430771 ATP5G3P48201 142 aa8.13□□□□□ -1.11
CHD4-202ENST00000430771 CNN1P51911 297 aaKnown RBP8.13□□□□□ -1.11
CHD4-202ENST00000430771 DEFB1P60022 68 aa8.13□□□□□ -1.11
CHD4-202ENST00000430771 TMEM78Q5T7P6 136 aa8.13□□□□□ -1.11
CHD4-202ENST00000430771 GDF5OSQ5U4N7 250 aa8.13□□□□□ -1.11
CHD4-202ENST00000430771 MORN3Q6PF18 240 aaPredicted RBP8.13□□□□□ -1.11
CHD4-202ENST00000430771 CYB561D1Q8N8Q1 229 aa8.13□□□□□ -1.11
CHD4-202ENST00000430771 OR4B1Q8NGF8 309 aa8.13□□□□□ -1.11
CHD4-202ENST00000430771 CLUHP3Q96NS8 147 aa8.13□□□□□ -1.11
CHD4-202ENST00000430771 PPP1R14DQ9NXH3 145 aa8.13□□□□□ -1.11
CHD4-202ENST00000430771 FBN3Q75N90 2809 aa8.12□□□□□ -1.11
CHD4-202ENST00000430771 IGKV2-40A0A087WW87 121 aaPredicted RBP8.12□□□□□ -1.11
CHD4-202ENST00000430771 KIR2DL5BA0A0G2JN68 375 aa8.12□□□□□ -1.11
CHD4-202ENST00000430771 KIR2DL5BA0A0G2JPC4 375 aa8.12□□□□□ -1.11
CHD4-202ENST00000430771 LOC102723971A0A1B0GUV8 181 aa8.12□□□□□ -1.11
CHD4-202ENST00000430771 PRAC2D3DTV9 90 aa8.12□□□□□ -1.11
CHD4-202ENST00000430771 PEX7O00628 323 aa8.12□□□□□ -1.11
CHD4-202ENST00000430771 IGKV2D-40P01614 121 aaPredicted RBP8.12□□□□□ -1.11
CHD4-202ENST00000430771 RPL35AP18077 110 aaKnown RBP8.12□□□□□ -1.11
CHD4-202ENST00000430771 AKR1C3P42330 323 aa8.12□□□□□ -1.11
CHD4-202ENST00000430771 GNG5P63218 68 aa8.12□□□□□ -1.11
CHD4-202ENST00000430771 CCL20P78556 96 aa8.12□□□□□ -1.11
CHD4-202ENST00000430771 DEFA6Q01524 100 aa8.12□□□□□ -1.11
CHD4-202ENST00000430771 IFITM2Q01629 132 aa8.12□□□□□ -1.11
CHD4-202ENST00000430771 MEF2BQ02080 365 aaPredicted RBP8.12□□□□□ -1.11
CHD4-202ENST00000430771 HAGHQ16775 308 aa8.12□□□□□ -1.11
CHD4-202ENST00000430771 GOLT1AQ6ZVE7 132 aa8.12□□□□□ -1.11
CHD4-202ENST00000430771 KIR2DL5AQ8N109 375 aa8.12□□□□□ -1.11
CHD4-202ENST00000430771 KIR2DL5BQ8NHK3 375 aa8.12□□□□□ -1.11
CHD4-202ENST00000430771 PCNPQ8WW12 178 aaKnown RBP8.12□□□□□ -1.11
CHD4-202ENST00000430771 ODF3Q96PU9 254 aa8.12□□□□□ -1.11
CHD4-202ENST00000430771 VAX2Q9UIW0 290 aa8.12□□□□□ -1.11
CHD4-202ENST00000430771 EPDR1Q9UM22 224 aa8.12□□□□□ -1.11
CHD4-202ENST00000430771 A8MTW9 85 aa8.11□□□□□ -1.11
CHD4-202ENST00000430771 RGS13O14921 159 aa8.11□□□□□ -1.11
CHD4-202ENST00000430771 PDE6DO43924 150 aa8.11□□□□□ -1.11
CHD4-202ENST00000430771 AMBPP02760 352 aa8.11□□□□□ -1.11
CHD4-202ENST00000430771 FRMD6-AS1P0C7T7 363 aa8.11□□□□□ -1.11
CHD4-202ENST00000430771 ZNF705DP0CH99 300 aaPredicted RBP8.11□□□□□ -1.11
CHD4-202ENST00000430771 ZNF705BP0CI00 300 aaPredicted RBP8.11□□□□□ -1.11
CHD4-202ENST00000430771 TSPOP30536 169 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms