RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 A6NJY4 79 aa10.07□□□□□ -0.8
CPNE4-201ENST00000429747 KLF5Q13887 457 aaPredicted RBP10.07□□□□□ -0.8
CPNE4-201ENST00000429747 TLN1Q9Y490 2541 aaKnown RBP10.06□□□□□ -0.8
CPNE4-201ENST00000429747 HAX1O00165 279 aa10.06□□□□□ -0.8
CPNE4-201ENST00000429747 LTAP01374 205 aa10.06□□□□□ -0.8
CPNE4-201ENST00000429747 IGKCP01834 107 aa10.06□□□□□ -0.8
CPNE4-201ENST00000429747 RNF5Q99942 180 aa10.06□□□□□ -0.8
CPNE4-201ENST00000429747 CST9LQ9H4G1 147 aa10.06□□□□□ -0.8
CPNE4-201ENST00000429747 IGLV2-8P01709 118 aa10.06□□□□□ -0.8
CPNE4-201ENST00000429747 ERCC8Q13216 396 aa10.06□□□□□ -0.8
CPNE4-201ENST00000429747 CR1LQ2VPA4 569 aa10.06□□□□□ -0.8
CPNE4-201ENST00000429747 FAM104BQ5XKR9 115 aa10.06□□□□□ -0.8
CPNE4-201ENST00000429747 VKORC1Q9BQB6 163 aa10.06□□□□□ -0.8
CPNE4-201ENST00000429747 CGB3P0DN86 165 aa10.05□□□□□ -0.8
CPNE4-201ENST00000429747 CGB7P0DN87 165 aa10.05□□□□□ -0.8
CPNE4-201ENST00000429747 C3orf36Q3SXR2 165 aa10.05□□□□□ -0.8
CPNE4-201ENST00000429747 VMO1Q7Z5L0 202 aa10.05□□□□□ -0.8
CPNE4-201ENST00000429747 DEFB104AQ8WTQ1 72 aa10.05□□□□□ -0.8
CPNE4-201ENST00000429747 BVES-AS1Q5T3Y7 98 aa10.05□□□□□ -0.8
CPNE4-201ENST00000429747 ZC2HC1BQ5TFG8 222 aa10.05□□□□□ -0.8
CPNE4-201ENST00000429747 SAMD5Q5TGI4 173 aa10.05□□□□□ -0.8
CPNE4-201ENST00000429747 PRSS57Q6UWY2 283 aa10.05□□□□□ -0.8
CPNE4-201ENST00000429747 Q8N7P7 452 aa10.05□□□□□ -0.8
CPNE4-201ENST00000429747 TMEM75Q8N9X5 138 aa10.05□□□□□ -0.8
CPNE4-201ENST00000429747 GTSF1Q8WW33 167 aa10.05□□□□□ -0.8
CPNE4-201ENST00000429747 SLC50A1Q9BRV3 221 aa10.05□□□□□ -0.8
CPNE4-201ENST00000429747 NEU4Q8WWR8 484 aaPredicted RBP10.05□□□□□ -0.8
CPNE4-201ENST00000429747 ASIPP42127 132 aa10.04□□□□□ -0.8
CPNE4-201ENST00000429747 TMEM158Q8WZ71 300 aa10.04□□□□□ -0.8
CPNE4-201ENST00000429747 MRPL16Q9NX20 251 aaKnown RBP10.04□□□□□ -0.8
CPNE4-201ENST00000429747 SIGLEC8Q9NYZ4 499 aa10.04□□□□□ -0.8
CPNE4-201ENST00000429747 KIAA1549Q9HCM3 1950 aa10.04□□□□□ -0.8
CPNE4-201ENST00000429747 A0A1B0GWB2 263 aa10.04□□□□□ -0.8
CPNE4-201ENST00000429747 SMAD7O15105 426 aaKnown RBP10.04□□□□□ -0.8
CPNE4-201ENST00000429747 NDUFB8O95169 186 aa10.04□□□□□ -0.8
CPNE4-201ENST00000429747 APOMO95445 188 aa10.04□□□□□ -0.8
CPNE4-201ENST00000429747 OCIAD2Q56VL3 154 aa10.04□□□□□ -0.8
CPNE4-201ENST00000429747 TMEM170BQ5T4T1 132 aa10.04□□□□□ -0.8
CPNE4-201ENST00000429747 RAXQ9Y2V3 346 aa10.04□□□□□ -0.8
CPNE4-201ENST00000429747 GP9P14770 177 aa10.04□□□□□ -0.8
CPNE4-201ENST00000429747 NDPQ00604 133 aa10.04□□□□□ -0.8
CPNE4-201ENST00000429747 FAM120AOSQ5T036 256 aa10.04□□□□□ -0.8
CPNE4-201ENST00000429747 ID1P41134 155 aa10.04□□□□□ -0.8
CPNE4-201ENST00000429747 MRPL51Q4U2R6 128 aaKnown RBP10.04□□□□□ -0.8
CPNE4-201ENST00000429747 RNF114Q9Y508 228 aa10.04□□□□□ -0.8
CPNE4-201ENST00000429747 TANC2Q9HCD6 1990 aa10.03□□□□□ -0.8
CPNE4-201ENST00000429747 FAM159AQ6UWV7 190 aa10.03□□□□□ -0.8
CPNE4-201ENST00000429747 COX8AP10176 69 aa10.03□□□□□ -0.8
CPNE4-201ENST00000429747 RNASE4P34096 147 aaKnown RBP10.03□□□□□ -0.8
CPNE4-201ENST00000429747 GDF5OSQ5U4N7 250 aa10.03□□□□□ -0.8
CPNE4-201ENST00000429747 IGFL2Q6UWQ7 119 aa10.03□□□□□ -0.8
CPNE4-201ENST00000429747 IGFL3Q6UXB1 125 aa10.03□□□□□ -0.8
CPNE4-201ENST00000429747 RNF182Q8N6D2 247 aa10.03□□□□□ -0.8
CPNE4-201ENST00000429747 PRSS33Q8NF86 280 aa10.03□□□□□ -0.8
CPNE4-201ENST00000429747 TMEM14CQ9P0S9 112 aa10.03□□□□□ -0.8
CPNE4-201ENST00000429747 THBDP07204 575 aa10.03□□□□□ -0.8
CPNE4-201ENST00000429747 PDE6HQ13956 83 aa10.03□□□□□ -0.8
CPNE4-201ENST00000429747 ZNF491Q8N8L2 437 aa10.03□□□□□ -0.8
CPNE4-201ENST00000429747 KIR2DL4Q99706 377 aa10.03□□□□□ -0.8
CPNE4-201ENST00000429747 H3BRN7 92 aa10.02□□□□□ -0.8
CPNE4-201ENST00000429747 SRSF1Q07955 248 aaKnown RBP eCLIP10.02□□□□□ -0.8
CPNE4-201ENST00000429747 PSMG4Q5JS54 123 aa10.02□□□□□ -0.8
CPNE4-201ENST00000429747 TMEM219Q86XT9 240 aa10.02□□□□□ -0.8
CPNE4-201ENST00000429747 RNASE8Q8TDE3 154 aaKnown RBP10.02□□□□□ -0.8
CPNE4-201ENST00000429747 ZNF747Q9BV97 191 aa10.02□□□□□ -0.8
CPNE4-201ENST00000429747 IGKV1-17P01599 117 aa10.02□□□□□ -0.81
CPNE4-201ENST00000429747 DGAT2L7PQ6IED9 249 aa10.02□□□□□ -0.81
CPNE4-201ENST00000429747 CDH23Q9H251 3354 aa10.02□□□□□ -0.81
CPNE4-201ENST00000429747 TGFAP01135 160 aa10.02□□□□□ -0.81
CPNE4-201ENST00000429747 PRSS2P07478 247 aa10.02□□□□□ -0.81
CPNE4-201ENST00000429747 SP5Q6BEB4 398 aaPredicted RBP10.02□□□□□ -0.81
CPNE4-201ENST00000429747 ZNF562Q6V9R5 426 aa10.02□□□□□ -0.81
CPNE4-201ENST00000429747 OR5A1Q8NGJ0 315 aa10.02□□□□□ -0.81
CPNE4-201ENST00000429747 ZNF418Q8TF45 676 aaPredicted RBP10.02□□□□□ -0.81
CPNE4-201ENST00000429747 ZNF479Q96JC4 524 aa10.02□□□□□ -0.81
CPNE4-201ENST00000429747 PRR25Q96S07 402 aa10.02□□□□□ -0.81
CPNE4-201ENST00000429747 JMJD8Q96S16 334 aa10.02□□□□□ -0.81
CPNE4-201ENST00000429747 TP73-AS1Q9UF72 201 aa10.02□□□□□ -0.81
CPNE4-201ENST00000429747 TNFRSF6BO95407 300 aa10.01□□□□□ -0.81
CPNE4-201ENST00000429747 NPYP01303 97 aa10.01□□□□□ -0.81
CPNE4-201ENST00000429747 LINC00322Q6ZN03 302 aaPredicted RBP10.01□□□□□ -0.81
CPNE4-201ENST00000429747 MUC6Q6W4X9 2439 aa10.01□□□□□ -0.81
CPNE4-201ENST00000429747 ZNF56Q15929 161 aa10.01□□□□□ -0.81
CPNE4-201ENST00000429747 WFDC12Q8WWY7 111 aa10.01□□□□□ -0.81
CPNE4-201ENST00000429747 DYSFO75923 2080 aa10.01□□□□□ -0.81
CPNE4-201ENST00000429747 HLA-DMBP28068 263 aa10.01□□□□□ -0.81
CPNE4-201ENST00000429747 NCKAP5O14513 1909 aa10.01□□□□□ -0.81
CPNE4-201ENST00000429747 IGKV1D-37A0A075B6S9 117 aa10□□□□□ -0.81
CPNE4-201ENST00000429747 LAGE3Q14657 143 aa10□□□□□ -0.81
CPNE4-201ENST00000429747 C22orf34Q6ZV56 151 aa10□□□□□ -0.81
CPNE4-201ENST00000429747 VGLL1Q99990 258 aa10□□□□□ -0.81
CPNE4-201ENST00000429747 SRD5A1P18405 259 aa10□□□□□ -0.81
CPNE4-201ENST00000429747 PRTN3P24158 256 aa10□□□□□ -0.81
CPNE4-201ENST00000429747 C1orf159Q96HA4 380 aa10□□□□□ -0.81
CPNE4-201ENST00000429747 SRSF8Q9BRL6 282 aaKnown RBP10□□□□□ -0.81
CPNE4-201ENST00000429747 KAAG1Q9UBP8 84 aa10□□□□□ -0.81
CPNE4-201ENST00000429747 EXPH5Q8NEV8 1989 aa10□□□□□ -0.81
CPNE4-201ENST00000429747 C2orf70A6NJV1 201 aa10□□□□□ -0.81
CPNE4-201ENST00000429747 IGLV2-23P01705 113 aa10□□□□□ -0.81
CPNE4-201ENST00000429747 LGALS3P17931 250 aaKnown RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms