RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 LINC01549A6NIU2 74 aa11.61□□□□□ -0.55
SYNGAP1-203ENST00000428982 LY6DQ14210 128 aa11.61□□□□□ -0.55
SYNGAP1-203ENST00000428982 C15orf61A6NNL5 157 aa11.61□□□□□ -0.55
SYNGAP1-203ENST00000428982 CECR9P0C854 216 aa11.6□□□□□ -0.55
SYNGAP1-203ENST00000428982 FGF6P10767 208 aa11.6□□□□□ -0.55
SYNGAP1-203ENST00000428982 DKK2Q9UBU2 259 aa11.6□□□□□ -0.55
SYNGAP1-203ENST00000428982 TNRC6BQ9UPQ9 1833 aaKnown RBP11.6□□□□□ -0.55
SYNGAP1-203ENST00000428982 CACNA1BQ00975 2339 aa11.6□□□□□ -0.55
SYNGAP1-203ENST00000428982 PLAUP00749 431 aa11.6□□□□□ -0.55
SYNGAP1-203ENST00000428982 NRGNQ92686 78 aa11.6□□□□□ -0.55
SYNGAP1-203ENST00000428982 DNAJC30Q96LL9 226 aa11.6□□□□□ -0.55
SYNGAP1-203ENST00000428982 VKORC1Q9BQB6 163 aa11.6□□□□□ -0.55
SYNGAP1-203ENST00000428982 PMS2P5A8MQ11 134 aa11.59□□□□□ -0.55
SYNGAP1-203ENST00000428982 ORM2P19652 201 aa11.59□□□□□ -0.55
SYNGAP1-203ENST00000428982 C9JAW5 83 aa11.59□□□□□ -0.55
SYNGAP1-203ENST00000428982 OR9G1Q8NH87 305 aa11.59□□□□□ -0.55
SYNGAP1-203ENST00000428982 HIGD1AQ9Y241 93 aa11.59□□□□□ -0.55
SYNGAP1-203ENST00000428982 ATP5LO75964 103 aa11.59□□□□□ -0.55
SYNGAP1-203ENST00000428982 HERVK_113P61574 105 aa11.59□□□□□ -0.55
SYNGAP1-203ENST00000428982 VKORC1L1Q8N0U8 176 aa11.59□□□□□ -0.55
SYNGAP1-203ENST00000428982 FOXA2Q9Y261 457 aaPredicted RBP11.59□□□□□ -0.55
SYNGAP1-203ENST00000428982 D6R8Y8 96 aa11.58□□□□□ -0.56
SYNGAP1-203ENST00000428982 PYYP10082 97 aa11.58□□□□□ -0.56
SYNGAP1-203ENST00000428982 FOXE3Q13461 319 aa11.58□□□□□ -0.56
SYNGAP1-203ENST00000428982 F5H768 121 aa11.58□□□□□ -0.56
SYNGAP1-203ENST00000428982 LEPP41159 167 aa11.58□□□□□ -0.56
SYNGAP1-203ENST00000428982 ZNF56Q15929 161 aa11.58□□□□□ -0.56
SYNGAP1-203ENST00000428982 SLC25A48Q6ZT89 311 aaKnown RBP11.58□□□□□ -0.56
SYNGAP1-203ENST00000428982 URB1-AS1Q96HZ7 61 aa11.58□□□□□ -0.56
SYNGAP1-203ENST00000428982 NDUFA3O95167 84 aa11.57□□□□□ -0.56
SYNGAP1-203ENST00000428982 THBDP07204 575 aa11.57□□□□□ -0.56
SYNGAP1-203ENST00000428982 C8orf46Q8TAG6 207 aa11.57□□□□□ -0.56
SYNGAP1-203ENST00000428982 EDA2RQ9HAV5 297 aa11.57□□□□□ -0.56
SYNGAP1-203ENST00000428982 SRSF1Q07955 248 aaKnown RBP eCLIP11.57□□□□□ -0.56
SYNGAP1-203ENST00000428982 RPL39P5Q59GN2 51 aa11.57□□□□□ -0.56
SYNGAP1-203ENST00000428982 GAGE2AQ6NT46 116 aa11.57□□□□□ -0.56
SYNGAP1-203ENST00000428982 PCNX1Q96RV3 2341 aa11.57□□□□□ -0.56
SYNGAP1-203ENST00000428982 A0A1W2PPI3 338 aa11.56□□□□□ -0.56
SYNGAP1-203ENST00000428982 ZNF503-AS2A6NEH8 195 aa11.56□□□□□ -0.56
SYNGAP1-203ENST00000428982 LINC00473A8K010 186 aa11.56□□□□□ -0.56
SYNGAP1-203ENST00000428982 WDR86Q86TI4 376 aa11.56□□□□□ -0.56
SYNGAP1-203ENST00000428982 ANKRD29Q8N6D5 301 aa11.56□□□□□ -0.56
SYNGAP1-203ENST00000428982 TMEM101Q96IK0 257 aa11.56□□□□□ -0.56
SYNGAP1-203ENST00000428982 ZGRF1Q86YA3 2104 aa11.56□□□□□ -0.56
SYNGAP1-203ENST00000428982 LAMA1P25391 3075 aa11.56□□□□□ -0.56
SYNGAP1-203ENST00000428982 NPFFO15130 113 aa11.56□□□□□ -0.56
SYNGAP1-203ENST00000428982 LINC00694P0DN24 101 aa11.56□□□□□ -0.56
SYNGAP1-203ENST00000428982 IGF2BP2-AS1Q96M15 143 aa11.56□□□□□ -0.56
SYNGAP1-203ENST00000428982 C1orf43Q9BWL3 253 aa11.56□□□□□ -0.56
SYNGAP1-203ENST00000428982 ICE1Q9Y2F5 2266 aa11.56□□□□□ -0.56
SYNGAP1-203ENST00000428982 IGHV3OR15-7A0A075B7D8 119 aa11.56□□□□□ -0.56
SYNGAP1-203ENST00000428982 SRRM5B3KS81 715 aa11.56□□□□□ -0.56
SYNGAP1-203ENST00000428982 IFI27L2Q9H2X8 130 aa11.56□□□□□ -0.56
SYNGAP1-203ENST00000428982 SPEGQ15772 3267 aa11.56□□□□□ -0.56
SYNGAP1-203ENST00000428982 A0A087WX48 190 aa11.55□□□□□ -0.56
SYNGAP1-203ENST00000428982 TRAV4A0A0B4J268 109 aa11.55□□□□□ -0.56
SYNGAP1-203ENST00000428982 IGHV3-13P01766 116 aa11.55□□□□□ -0.56
SYNGAP1-203ENST00000428982 FMC1Q96HJ9 113 aa11.55□□□□□ -0.56
SYNGAP1-203ENST00000428982 GFRA4Q9GZZ7 299 aa11.55□□□□□ -0.56
SYNGAP1-203ENST00000428982 MYMXA0A1B0GTQ4 84 aa11.55□□□□□ -0.56
SYNGAP1-203ENST00000428982 SLC25A20O43772 301 aa11.55□□□□□ -0.56
SYNGAP1-203ENST00000428982 CCL17Q92583 94 aa11.55□□□□□ -0.56
SYNGAP1-203ENST00000428982 UPK2O00526 184 aa11.55□□□□□ -0.56
SYNGAP1-203ENST00000428982 IGLV2-14P01704 120 aa11.55□□□□□ -0.56
SYNGAP1-203ENST00000428982 CD40P25942 277 aa11.55□□□□□ -0.56
SYNGAP1-203ENST00000428982 PRADC1Q9BSG0 188 aa11.55□□□□□ -0.56
SYNGAP1-203ENST00000428982 K7EM74 188 aa11.54□□□□□ -0.56
SYNGAP1-203ENST00000428982 TNFRSF6BO95407 300 aa11.54□□□□□ -0.56
SYNGAP1-203ENST00000428982 CT83Q5H943 113 aa11.54□□□□□ -0.56
SYNGAP1-203ENST00000428982 CFAP126Q5VTH2 177 aa11.54□□□□□ -0.56
SYNGAP1-203ENST00000428982 MOB3BQ86TA1 216 aa11.54□□□□□ -0.56
SYNGAP1-203ENST00000428982 NDUFB3O43676 98 aa11.54□□□□□ -0.56
SYNGAP1-203ENST00000428982 IGLV2-8P01709 118 aa11.54□□□□□ -0.56
SYNGAP1-203ENST00000428982 P0C879 139 aa11.54□□□□□ -0.56
SYNGAP1-203ENST00000428982 PRCDQ00LT1 54 aa11.54□□□□□ -0.56
SYNGAP1-203ENST00000428982 NPIPB3Q92617 1050 aa11.54□□□□□ -0.56
SYNGAP1-203ENST00000428982 BEX4Q9NWD9 120 aaPredicted RBP11.54□□□□□ -0.56
SYNGAP1-203ENST00000428982 EXPH5Q8NEV8 1989 aa11.54□□□□□ -0.56
SYNGAP1-203ENST00000428982 A0A1B0GXF2 115 aa11.54□□□□□ -0.56
SYNGAP1-203ENST00000428982 OR11H6Q8NGC7 330 aa11.54□□□□□ -0.56
SYNGAP1-203ENST00000428982 ITLN1Q8WWA0 313 aa11.54□□□□□ -0.56
SYNGAP1-203ENST00000428982 PMVKQ15126 192 aa11.54□□□□□ -0.56
SYNGAP1-203ENST00000428982 PRR30Q53SZ7 412 aaPredicted RBP11.54□□□□□ -0.56
SYNGAP1-203ENST00000428982 DCTN5Q9BTE1 182 aa11.54□□□□□ -0.56
SYNGAP1-203ENST00000428982 EML6Q6ZMW3 1958 aa11.53□□□□□ -0.56
SYNGAP1-203ENST00000428982 NDUFS7O75251 213 aa11.53□□□□□ -0.56
SYNGAP1-203ENST00000428982 DUX4L9Q6RFH8 374 aaPredicted RBP11.53□□□□□ -0.56
SYNGAP1-203ENST00000428982 TMEM190Q8WZ59 177 aa11.53□□□□□ -0.56
SYNGAP1-203ENST00000428982 CHCHD5Q9BSY4 110 aa11.53□□□□□ -0.56
SYNGAP1-203ENST00000428982 PTPRQQ9UMZ3 2332 aa11.53□□□□□ -0.56
SYNGAP1-203ENST00000428982 H3BTX0 84 aa11.53□□□□□ -0.56
SYNGAP1-203ENST00000428982 DUX5Q96PT3 197 aa11.53□□□□□ -0.56
SYNGAP1-203ENST00000428982 DIAPH2-AS1Q14236 149 aa11.53□□□□□ -0.56
SYNGAP1-203ENST00000428982 PLGLAQ15195 96 aa11.53□□□□□ -0.56
SYNGAP1-203ENST00000428982 C2orf83Q53S99 150 aa11.53□□□□□ -0.56
SYNGAP1-203ENST00000428982 DKK4Q9UBT3 224 aa11.53□□□□□ -0.56
SYNGAP1-203ENST00000428982 USF3Q68DE3 2245 aa11.52□□□□□ -0.56
SYNGAP1-203ENST00000428982 TRAV40A0A0B4J280 105 aa11.52□□□□□ -0.56
SYNGAP1-203ENST00000428982 A0A0G2JNJ9 132 aa11.52□□□□□ -0.56
SYNGAP1-203ENST00000428982 ARMS2P0C7Q2 107 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms