RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 ZNF503Q96F45 646 aa11.45□□□□□ -0.58
VARS-216ENST00000428445 AGPAT2O15120 278 aa11.44□□□□□ -0.58
VARS-216ENST00000428445 RAB31Q13636 194 aa11.44□□□□□ -0.58
VARS-216ENST00000428445 GUK1Q16774 197 aa11.44□□□□□ -0.58
VARS-216ENST00000428445 GFI1BQ5VTD9 330 aa11.44□□□□□ -0.58
VARS-216ENST00000428445 CCDC28AQ8IWP9 274 aa11.44□□□□□ -0.58
VARS-216ENST00000428445 RXFP4Q8TDU9 374 aa11.44□□□□□ -0.58
VARS-216ENST00000428445 PXMP4Q9Y6I8 212 aa11.44□□□□□ -0.58
VARS-216ENST00000428445 LINC00854A0A1B0GVQ3 168 aa11.43□□□□□ -0.58
VARS-216ENST00000428445 C7orf66A4D0T2 115 aa11.43□□□□□ -0.58
VARS-216ENST00000428445 SCGB1D2O95969 90 aa11.43□□□□□ -0.58
VARS-216ENST00000428445 M6PRP20645 277 aa11.43□□□□□ -0.58
VARS-216ENST00000428445 Q6ZRG5 221 aa11.43□□□□□ -0.58
VARS-216ENST00000428445 LINC00612Q8N6U2 182 aa11.43□□□□□ -0.58
VARS-216ENST00000428445 RBM38Q9H0Z9 239 aaKnown RBP11.43□□□□□ -0.58
VARS-216ENST00000428445 DNAJC4Q9NNZ3 241 aa11.43□□□□□ -0.58
VARS-216ENST00000428445 ZNF586Q9NXT0 402 aa11.43□□□□□ -0.58
VARS-216ENST00000428445 GSKIPQ9P0R6 139 aa11.43□□□□□ -0.58
VARS-216ENST00000428445 H3BNG1 76 aa11.42□□□□□ -0.58
VARS-216ENST00000428445 COX7A2P2O60397 106 aa11.42□□□□□ -0.58
VARS-216ENST00000428445 BTF3P20290 206 aaKnown RBP11.42□□□□□ -0.58
VARS-216ENST00000428445 TMEM37Q8WXS4 190 aa11.42□□□□□ -0.58
VARS-216ENST00000428445 ODF3Q96PU9 254 aa11.42□□□□□ -0.58
VARS-216ENST00000428445 Q9H3A6 140 aa11.42□□□□□ -0.58
VARS-216ENST00000428445 TMPRSS5Q9H3S3 457 aa11.42□□□□□ -0.58
VARS-216ENST00000428445 HERC1Q15751 4861 aa11.42□□□□□ -0.58
VARS-216ENST00000428445 TRAV5A0A0B4J249 113 aa11.41□□□□□ -0.58
VARS-216ENST00000428445 TRAV12-3A0A0B4J271 114 aa11.41□□□□□ -0.58
VARS-216ENST00000428445 H3BQ15 152 aa11.41□□□□□ -0.58
VARS-216ENST00000428445 MBPP02686 304 aaPredicted RBP11.41□□□□□ -0.58
VARS-216ENST00000428445 CT45A10P0DMU9 189 aa11.41□□□□□ -0.58
VARS-216ENST00000428445 C10orf113Q5VZT2 155 aa11.41□□□□□ -0.58
VARS-216ENST00000428445 Q6ZTI0 123 aa11.41□□□□□ -0.58
VARS-216ENST00000428445 SAT2Q96F10 170 aaPredicted RBP11.41□□□□□ -0.58
VARS-216ENST00000428445 RCL1Q9Y2P8 373 aaKnown RBP11.41□□□□□ -0.58
VARS-216ENST00000428445 L7N2F9 121 aa11.4□□□□□ -0.58
VARS-216ENST00000428445 ZNF253O75346 499 aa11.4□□□□□ -0.58
VARS-216ENST00000428445 RLN2P04090 185 aa11.4□□□□□ -0.58
VARS-216ENST00000428445 IGLC2P0DOY2 106 aa11.4□□□□□ -0.58
VARS-216ENST00000428445 BTCP35070 178 aa11.4□□□□□ -0.58
VARS-216ENST00000428445 VAMP2P63027 116 aa11.4□□□□□ -0.58
VARS-216ENST00000428445 ZNF846Q147U1 533 aa11.4□□□□□ -0.58
VARS-216ENST00000428445 OPCMLQ14982 345 aa11.4□□□□□ -0.58
VARS-216ENST00000428445 C12orf45Q8N5I9 185 aaPredicted RBP11.4□□□□□ -0.58
VARS-216ENST00000428445 OR1L4Q8NGR5 311 aa11.4□□□□□ -0.58
VARS-216ENST00000428445 CHAC2Q8WUX2 184 aa11.4□□□□□ -0.58
VARS-216ENST00000428445 MGST2Q99735 147 aa11.4□□□□□ -0.58
VARS-216ENST00000428445 FAT1Q14517 4588 aa11.4□□□□□ -0.58
VARS-216ENST00000428445 SNURFLB1AK76 121 aa11.39□□□□□ -0.59
VARS-216ENST00000428445 CAMLGP49069 296 aa11.39□□□□□ -0.59
VARS-216ENST00000428445 TTC32Q5I0X7 151 aa11.39□□□□□ -0.59
VARS-216ENST00000428445 ZNF431Q8TF32 576 aaPredicted RBP11.39□□□□□ -0.59
VARS-216ENST00000428445 VSIG2Q96IQ7 327 aa11.39□□□□□ -0.59
VARS-216ENST00000428445 PFDN5Q99471 154 aa11.39□□□□□ -0.59
VARS-216ENST00000428445 SDHCQ99643 169 aaPredicted RBP11.39□□□□□ -0.59
VARS-216ENST00000428445 PYGO2Q9BRQ0 406 aa11.39□□□□□ -0.59
VARS-216ENST00000428445 UPK3BQ9BT76 320 aa11.39□□□□□ -0.59
VARS-216ENST00000428445 C20orf85Q9H1P6 137 aa11.39□□□□□ -0.59
VARS-216ENST00000428445 MRPS16Q9Y3D3 137 aaKnown RBP11.39□□□□□ -0.59
VARS-216ENST00000428445 TNFRSF18Q9Y5U5 241 aa11.39□□□□□ -0.59
VARS-216ENST00000428445 A0A096LPF7 62 aa11.38□□□□□ -0.59
VARS-216ENST00000428445 LEPP41159 167 aa11.38□□□□□ -0.59
VARS-216ENST00000428445 RPL29P47914 159 aaKnown RBP11.38□□□□□ -0.59
VARS-216ENST00000428445 DAZ2Q13117 558 aaKnown RBP11.38□□□□□ -0.59
VARS-216ENST00000428445 ERCC8Q13216 396 aa11.38□□□□□ -0.59
VARS-216ENST00000428445 MRPL53Q96EL3 112 aaKnown RBP11.38□□□□□ -0.59
VARS-216ENST00000428445 GSN-AS1Q9NRJ2 163 aa11.38□□□□□ -0.59
VARS-216ENST00000428445 A0A1W2PPQ1 181 aa11.37□□□□□ -0.59
VARS-216ENST00000428445 IL7P13232 177 aa11.37□□□□□ -0.59
VARS-216ENST00000428445 PVALBP20472 110 aaPredicted RBP11.37□□□□□ -0.59
VARS-216ENST00000428445 S100A11P31949 105 aa11.37□□□□□ -0.59
VARS-216ENST00000428445 LINC00315P59091 139 aa11.37□□□□□ -0.59
VARS-216ENST00000428445 NRARPQ7Z6K4 114 aa11.37□□□□□ -0.59
VARS-216ENST00000428445 C18orf15Q96N68 181 aa11.37□□□□□ -0.59
VARS-216ENST00000428445 UQCC1Q9NVA1 299 aa11.37□□□□□ -0.59
VARS-216ENST00000428445 WDR83OSQ9Y284 106 aa11.37□□□□□ -0.59
VARS-216ENST00000428445 NPIPB6E9PJ23 425 aa11.36□□□□□ -0.59
VARS-216ENST00000428445 CCSO14618 274 aa11.36□□□□□ -0.59
VARS-216ENST00000428445 SLC25A5P05141 298 aaKnown RBP11.36□□□□□ -0.59
VARS-216ENST00000428445 BCAP31P51572 246 aa11.36□□□□□ -0.59
VARS-216ENST00000428445 ATP6V1FQ16864 119 aa11.36□□□□□ -0.59
VARS-216ENST00000428445 VWC2Q2TAL6 325 aa11.36□□□□□ -0.59
VARS-216ENST00000428445 MIC13Q5XKP0 118 aa11.36□□□□□ -0.59
VARS-216ENST00000428445 LINC00477Q96M19 166 aa11.36□□□□□ -0.59
VARS-216ENST00000428445 LINC00467Q9BRT7 94 aa11.36□□□□□ -0.59
VARS-216ENST00000428445 PRELID1Q9Y255 219 aa11.36□□□□□ -0.59
VARS-216ENST00000428445 TCRBP04435 133 aa11.35□□□□□ -0.59
VARS-216ENST00000428445 CAV2P51636 162 aa11.35□□□□□ -0.59
VARS-216ENST00000428445 PDE6HQ13956 83 aa11.35□□□□□ -0.59
VARS-216ENST00000428445 Q6ZQT7 251 aa11.35□□□□□ -0.59
VARS-216ENST00000428445 Q6ZRN7 208 aaPredicted RBP11.35□□□□□ -0.59
VARS-216ENST00000428445 C2orf50Q96LR7 162 aa11.35□□□□□ -0.59
VARS-216ENST00000428445 TMEM14CQ9P0S9 112 aa11.35□□□□□ -0.59
VARS-216ENST00000428445 KLF12Q9Y4X4 402 aa11.35□□□□□ -0.59
VARS-216ENST00000428445 M0R3E3 92 aa11.34□□□□□ -0.59
VARS-216ENST00000428445 PLA2G10O15496 165 aa11.34□□□□□ -0.59
VARS-216ENST00000428445 LYRM1O43325 122 aa11.34□□□□□ -0.59
VARS-216ENST00000428445 NMBP08949 121 aa11.34□□□□□ -0.59
VARS-216ENST00000428445 SULT1A1P50225 295 aa11.34□□□□□ -0.59
VARS-216ENST00000428445 HBG1P69891 147 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms