RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 LYPD1Q8N2G4 141 aa12.68□□□□□ -0.38
C9orf3-206ENST00000428313 PTH2Q96A98 100 aa12.68□□□□□ -0.38
C9orf3-206ENST00000428313 MRPL35Q9NZE8 188 aaKnown RBP12.68□□□□□ -0.38
C9orf3-206ENST00000428313 TNRC18O15417 2968 aaPredicted RBP12.67□□□□□ -0.38
C9orf3-206ENST00000428313 TRBV20-1A0A075B6N2 111 aa12.67□□□□□ -0.38
C9orf3-206ENST00000428313 ZNF833PQ6ZTB9 187 aa12.67□□□□□ -0.38
C9orf3-206ENST00000428313 FBXL15Q9H469 300 aa12.67□□□□□ -0.38
C9orf3-206ENST00000428313 LINC00574Q9H8X3 128 aa12.67□□□□□ -0.38
C9orf3-206ENST00000428313 PI4KAP42356 2102 aa12.67□□□□□ -0.38
C9orf3-206ENST00000428313 M0QXV9 152 aa12.67□□□□□ -0.38
C9orf3-206ENST00000428313 TNFRSF1AP19438 455 aa12.67□□□□□ -0.38
C9orf3-206ENST00000428313 MAGEA5P43359 124 aa12.67□□□□□ -0.38
C9orf3-206ENST00000428313 UBE2D1P51668 147 aa12.67□□□□□ -0.38
C9orf3-206ENST00000428313 FZR1Q9UM11 496 aa12.67□□□□□ -0.38
C9orf3-206ENST00000428313 IFITM1P13164 125 aa12.66□□□□□ -0.38
C9orf3-206ENST00000428313 TRBV19A0A075B6N1 114 aa12.65□□□□□ -0.38
C9orf3-206ENST00000428313 RNF185Q96GF1 192 aa12.65□□□□□ -0.38
C9orf3-206ENST00000428313 REV3LO60673 3130 aa12.65□□□□□ -0.38
C9orf3-206ENST00000428313 IGHV3OR15-7A0A075B7D8 119 aa12.65□□□□□ -0.38
C9orf3-206ENST00000428313 LINC01549A6NIU2 74 aa12.65□□□□□ -0.38
C9orf3-206ENST00000428313 SNCGO76070 127 aa12.65□□□□□ -0.38
C9orf3-206ENST00000428313 LOC107984156A0A0G2JMH3 177 aa12.64□□□□□ -0.39
C9orf3-206ENST00000428313 TTC32Q5I0X7 151 aa12.64□□□□□ -0.39
C9orf3-206ENST00000428313 SPINK14Q6IE38 97 aa12.64□□□□□ -0.39
C9orf3-206ENST00000428313 ARL17AQ8IVW1 177 aa12.64□□□□□ -0.39
C9orf3-206ENST00000428313 Q8N8P6 123 aa12.64□□□□□ -0.39
C9orf3-206ENST00000428313 SAP25Q8TEE9 199 aa12.64□□□□□ -0.39
C9orf3-206ENST00000428313 RPUSD1Q9UJJ7 312 aaKnown RBP12.64□□□□□ -0.39
C9orf3-206ENST00000428313 K7EM74 188 aa12.64□□□□□ -0.39
C9orf3-206ENST00000428313 SH2D1AO60880 128 aa12.64□□□□□ -0.39
C9orf3-206ENST00000428313 TNFRSF6BO95407 300 aa12.64□□□□□ -0.39
C9orf3-206ENST00000428313 RUSC1-AS1Q66K80 236 aa12.64□□□□□ -0.39
C9orf3-206ENST00000428313 SIGLEC15Q6ZMC9 328 aa12.64□□□□□ -0.39
C9orf3-206ENST00000428313 COX8CQ7Z4L0 72 aa12.64□□□□□ -0.39
C9orf3-206ENST00000428313 MRPL20Q9BYC9 149 aaKnown RBP12.64□□□□□ -0.39
C9orf3-206ENST00000428313 FCN3O75636 299 aa12.63□□□□□ -0.39
C9orf3-206ENST00000428313 C10orf55Q5SWW7 151 aa12.63□□□□□ -0.39
C9orf3-206ENST00000428313 ANKRD29Q8N6D5 301 aa12.63□□□□□ -0.39
C9orf3-206ENST00000428313 MYOZ3Q8TDC0 251 aa12.63□□□□□ -0.39
C9orf3-206ENST00000428313 AJUBAQ96IF1 538 aa12.63□□□□□ -0.39
C9orf3-206ENST00000428313 C8orf49Q96NF6 230 aa12.63□□□□□ -0.39
C9orf3-206ENST00000428313 KIR2DL4Q99706 377 aa12.63□□□□□ -0.39
C9orf3-206ENST00000428313 TMSB15BA0A087X1C1 80 aa12.63□□□□□ -0.39
C9orf3-206ENST00000428313 MBNL2Q5VZF2 373 aaKnown RBP12.63□□□□□ -0.39
C9orf3-206ENST00000428313 ZFP2Q6ZN57 461 aa12.63□□□□□ -0.39
C9orf3-206ENST00000428313 SCNM1Q9BWG6 230 aa12.63□□□□□ -0.39
C9orf3-206ENST00000428313 NAV3Q8IVL0 2385 aa12.62□□□□□ -0.39
C9orf3-206ENST00000428313 A0A1W2PPI3 338 aa12.62□□□□□ -0.39
C9orf3-206ENST00000428313 IGLC6P0CF74 106 aa12.62□□□□□ -0.39
C9orf3-206ENST00000428313 PRR30Q53SZ7 412 aaPredicted RBP12.62□□□□□ -0.39
C9orf3-206ENST00000428313 OR4C13Q8NGP0 309 aa12.62□□□□□ -0.39
C9orf3-206ENST00000428313 TTTY12Q9BZ98 90 aa12.62□□□□□ -0.39
C9orf3-206ENST00000428313 NGBQ9NPG2 151 aa12.62□□□□□ -0.39
C9orf3-206ENST00000428313 LGALS1P09382 135 aaKnown RBP12.62□□□□□ -0.39
C9orf3-206ENST00000428313 IGHV1-2P23083 117 aa12.62□□□□□ -0.39
C9orf3-206ENST00000428313 LYZP61626 148 aa12.62□□□□□ -0.39
C9orf3-206ENST00000428313 OR11H6Q8NGC7 330 aa12.62□□□□□ -0.39
C9orf3-206ENST00000428313 ASCL2Q99929 193 aa12.62□□□□□ -0.39
C9orf3-206ENST00000428313 YAE1D1Q9NRH1 226 aa12.62□□□□□ -0.39
C9orf3-206ENST00000428313 IGLV2-18A0A075B6J9 118 aa12.61□□□□□ -0.39
C9orf3-206ENST00000428313 TRAV12-1A0A0B4J245 112 aa12.61□□□□□ -0.39
C9orf3-206ENST00000428313 TM4SF5O14894 197 aa12.61□□□□□ -0.39
C9orf3-206ENST00000428313 TCL1BO95988 128 aa12.61□□□□□ -0.39
C9orf3-206ENST00000428313 PLGLAQ15195 96 aa12.61□□□□□ -0.39
C9orf3-206ENST00000428313 PPP1R27Q86WC6 154 aa12.61□□□□□ -0.39
C9orf3-206ENST00000428313 CNFNQ9BYD5 112 aa12.61□□□□□ -0.39
C9orf3-206ENST00000428313 LINC01548A6NM66 108 aa12.6□□□□□ -0.39
C9orf3-206ENST00000428313 IGKV3-15P01624 115 aa12.6□□□□□ -0.39
C9orf3-206ENST00000428313 SRSF2Q01130 221 aaKnown RBP12.6□□□□□ -0.39
C9orf3-206ENST00000428313 SRSF8Q9BRL6 282 aaKnown RBP12.6□□□□□ -0.39
C9orf3-206ENST00000428313 CEACAM4O75871 244 aa12.6□□□□□ -0.39
C9orf3-206ENST00000428313 RASL11BQ9BPW5 248 aa12.6□□□□□ -0.39
C9orf3-206ENST00000428313 F8VRH5 84 aa12.59□□□□□ -0.39
C9orf3-206ENST00000428313 H7C1H1 209 aa12.59□□□□□ -0.39
C9orf3-206ENST00000428313 LHBP01229 141 aa12.59□□□□□ -0.39
C9orf3-206ENST00000428313 IGLV2-23P01705 113 aa12.59□□□□□ -0.39
C9orf3-206ENST00000428313 TRAV4A0A0B4J268 109 aa12.59□□□□□ -0.39
C9orf3-206ENST00000428313 NDUFA3O95167 84 aa12.59□□□□□ -0.39
C9orf3-206ENST00000428313 PRTN3P24158 256 aa12.59□□□□□ -0.39
C9orf3-206ENST00000428313 ANXA2RQ3ZCQ2 193 aa12.59□□□□□ -0.39
C9orf3-206ENST00000428313 TMEM78Q5T7P6 136 aa12.59□□□□□ -0.39
C9orf3-206ENST00000428313 SHANK2-AS3Q9BTD1 123 aa12.59□□□□□ -0.39
C9orf3-206ENST00000428313 NTN3O00634 580 aaPredicted RBP12.58□□□□□ -0.4
C9orf3-206ENST00000428313 CD7P09564 240 aa12.58□□□□□ -0.4
C9orf3-206ENST00000428313 SCGB1C2P0DMR2 95 aa12.58□□□□□ -0.4
C9orf3-206ENST00000428313 TMEM126AQ9H061 195 aa12.58□□□□□ -0.4
C9orf3-206ENST00000428313 LYZL6O75951 148 aa12.58□□□□□ -0.4
C9orf3-206ENST00000428313 LAGE3Q14657 143 aa12.58□□□□□ -0.4
C9orf3-206ENST00000428313 SPEGQ15772 3267 aa12.58□□□□□ -0.4
C9orf3-206ENST00000428313 FAM159AQ6UWV7 190 aa12.58□□□□□ -0.4
C9orf3-206ENST00000428313 ZNRD1Q9P1U0 126 aa12.58□□□□□ -0.4
C9orf3-206ENST00000428313 VPREB3Q9UKI3 123 aa12.58□□□□□ -0.4
C9orf3-206ENST00000428313 J3KRW8 73 aa12.57□□□□□ -0.4
C9orf3-206ENST00000428313 CD40P25942 277 aa12.57□□□□□ -0.4
C9orf3-206ENST00000428313 VMA21Q3ZAQ7 101 aa12.57□□□□□ -0.4
C9orf3-206ENST00000428313 HCP5Q6MZN7 132 aa12.57□□□□□ -0.4
C9orf3-206ENST00000428313 C17orf77Q96MU5 243 aa12.57□□□□□ -0.4
C9orf3-206ENST00000428313 PROCRQ9UNN8 238 aa12.57□□□□□ -0.4
C9orf3-206ENST00000428313 DNAJC13O75165 2243 aa12.57□□□□□ -0.4
C9orf3-206ENST00000428313 DSCAMO60469 2012 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms