RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 NPCDR1Q9BY65 106 aa13.12□□□□□ -0.31
GPC1-205ENST00000427506 PRAC2D3DTV9 90 aa13.11□□□□□ -0.31
GPC1-205ENST00000427506 P0DMU3 169 aa13.11□□□□□ -0.31
GPC1-205ENST00000427506 FAM231AP0DMU4 169 aa13.11□□□□□ -0.31
GPC1-205ENST00000427506 FAM231CP0DMU5 169 aa13.11□□□□□ -0.31
GPC1-205ENST00000427506 CLINT1Q14677 625 aa13.11□□□□□ -0.31
GPC1-205ENST00000427506 FAM210BQ96KR6 192 aa13.11□□□□□ -0.31
GPC1-205ENST00000427506 BATF3Q9NR55 127 aa13.11□□□□□ -0.31
GPC1-205ENST00000427506 EPPK1P58107 5090 aaKnown RBP13.11□□□□□ -0.31
GPC1-205ENST00000427506 LYRM9A8MSI8 78 aa13.1□□□□□ -0.31
GPC1-205ENST00000427506 H0YIZ8 118 aa13.1□□□□□ -0.31
GPC1-205ENST00000427506 AZU1P20160 251 aa13.1□□□□□ -0.31
GPC1-205ENST00000427506 TSPOP30536 169 aa13.1□□□□□ -0.31
GPC1-205ENST00000427506 ZNF586Q9NXT0 402 aa13.1□□□□□ -0.31
GPC1-205ENST00000427506 H2BFSP57053 126 aa13.09□□□□□ -0.31
GPC1-205ENST00000427506 TAS2R60P59551 318 aa13.09□□□□□ -0.31
GPC1-205ENST00000427506 PPP1R1CQ8WVI7 109 aa13.09□□□□□ -0.31
GPC1-205ENST00000427506 PARD6GQ9BYG4 376 aaPredicted RBP13.09□□□□□ -0.31
GPC1-205ENST00000427506 TIMM9Q9Y5J7 89 aa13.09□□□□□ -0.31
GPC1-205ENST00000427506 TRBV19A0A075B6N1 114 aa13.08□□□□□ -0.32
GPC1-205ENST00000427506 ZNF253O75346 499 aa13.08□□□□□ -0.32
GPC1-205ENST00000427506 DEFB130BP0DP73 79 aa13.08□□□□□ -0.32
GPC1-205ENST00000427506 DEFB130AP0DP74 79 aa13.08□□□□□ -0.32
GPC1-205ENST00000427506 GCSAMLQ5JQS6 135 aa13.08□□□□□ -0.32
GPC1-205ENST00000427506 TMEM14CQ9P0S9 112 aa13.08□□□□□ -0.32
GPC1-205ENST00000427506 H7BYZ3 331 aa13.07□□□□□ -0.32
GPC1-205ENST00000427506 J3KRW8 73 aa13.07□□□□□ -0.32
GPC1-205ENST00000427506 PET100P0DJ07 73 aa13.07□□□□□ -0.32
GPC1-205ENST00000427506 PYYP10082 97 aa13.07□□□□□ -0.32
GPC1-205ENST00000427506 HIST1H1EP10412 219 aaKnown RBP13.07□□□□□ -0.32
GPC1-205ENST00000427506 UBE2DNLQ8IWF7 75 aa13.07□□□□□ -0.32
GPC1-205ENST00000427506 POM121L12Q8N7R1 296 aa13.07□□□□□ -0.32
GPC1-205ENST00000427506 BLNKQ8WV28 456 aa13.07□□□□□ -0.32
GPC1-205ENST00000427506 C16orf74Q96GX8 76 aa13.07□□□□□ -0.32
GPC1-205ENST00000427506 WDR61Q9GZS3 305 aaKnown RBP13.07□□□□□ -0.32
GPC1-205ENST00000427506 KCNIP2Q9NS61 270 aa13.07□□□□□ -0.32
GPC1-205ENST00000427506 C17orf112F2Z3M2 114 aa13.06□□□□□ -0.32
GPC1-205ENST00000427506 LEPP41159 167 aa13.06□□□□□ -0.32
GPC1-205ENST00000427506 KIR3DS1Q14943 382 aa13.06□□□□□ -0.32
GPC1-205ENST00000427506 FCN2Q15485 313 aa13.06□□□□□ -0.32
GPC1-205ENST00000427506 TMEM88Q6PEY1 159 aa13.06□□□□□ -0.32
GPC1-205ENST00000427506 C20orf144Q9BQM9 153 aa13.06□□□□□ -0.32
GPC1-205ENST00000427506 PLAC8L1A1L4L8 177 aa13.05□□□□□ -0.32
GPC1-205ENST00000427506 NPIPB6E9PJ23 425 aa13.05□□□□□ -0.32
GPC1-205ENST00000427506 M0R3E3 92 aa13.05□□□□□ -0.32
GPC1-205ENST00000427506 MPC2O95563 127 aa13.05□□□□□ -0.32
GPC1-205ENST00000427506 CT45A10P0DMU9 189 aa13.05□□□□□ -0.32
GPC1-205ENST00000427506 PDE6HQ13956 83 aa13.05□□□□□ -0.32
GPC1-205ENST00000427506 GFI1BQ5VTD9 330 aa13.05□□□□□ -0.32
GPC1-205ENST00000427506 MIR17HGQ75NE6 70 aa13.05□□□□□ -0.32
GPC1-205ENST00000427506 CCDC28AQ8IWP9 274 aa13.05□□□□□ -0.32
GPC1-205ENST00000427506 MRPL53Q96EL3 112 aaKnown RBP13.05□□□□□ -0.32
GPC1-205ENST00000427506 ATP5SQ99766 215 aa13.05□□□□□ -0.32
GPC1-205ENST00000427506 SLC25A2Q9BXI2 301 aa13.05□□□□□ -0.32
GPC1-205ENST00000427506 AAMDCQ9H7C9 122 aa13.05□□□□□ -0.32
GPC1-205ENST00000427506 PRELID1Q9Y255 219 aa13.05□□□□□ -0.32
GPC1-205ENST00000427506 TIMM8BQ9Y5J9 83 aaPredicted RBP13.05□□□□□ -0.32
GPC1-205ENST00000427506 KMT2AQ03164 3969 aa13.05□□□□□ -0.32
GPC1-205ENST00000427506 NDUFB4O95168 129 aa13.04□□□□□ -0.32
GPC1-205ENST00000427506 ZNF493Q6ZR52 646 aa13.04□□□□□ -0.32
GPC1-205ENST00000427506 TMEM263Q8WUH6 116 aaKnown RBP13.04□□□□□ -0.32
GPC1-205ENST00000427506 F5H768 121 aa13.03□□□□□ -0.32
GPC1-205ENST00000427506 RPL12P30050 165 aaKnown RBP13.03□□□□□ -0.32
GPC1-205ENST00000427506 ERCC8Q13216 396 aa13.03□□□□□ -0.32
GPC1-205ENST00000427506 EXOC3-AS1Q8N2X6 119 aa13.03□□□□□ -0.32
GPC1-205ENST00000427506 SCGB1C1Q8TD33 95 aa13.03□□□□□ -0.32
GPC1-205ENST00000427506 ODF3Q96PU9 254 aa13.03□□□□□ -0.32
GPC1-205ENST00000427506 MRPL32Q9BYC8 188 aaKnown RBP13.03□□□□□ -0.32
GPC1-205ENST00000427506 SMIM3Q9BZL3 60 aa13.03□□□□□ -0.32
GPC1-205ENST00000427506 OR51M1Q9H341 326 aa13.03□□□□□ -0.32
GPC1-205ENST00000427506 NOP10Q9NPE3 64 aaKnown RBP13.03□□□□□ -0.32
GPC1-205ENST00000427506 HSPB11Q9Y547 144 aa13.03□□□□□ -0.32
GPC1-205ENST00000427506 TRAV12-3A0A0B4J271 114 aa13.02□□□□□ -0.33
GPC1-205ENST00000427506 IFNA5P01569 189 aa13.02□□□□□ -0.33
GPC1-205ENST00000427506 ATP5G1P05496 136 aa13.02□□□□□ -0.33
GPC1-205ENST00000427506 NBEAP1P0C6P0 100 aa13.02□□□□□ -0.33
GPC1-205ENST00000427506 ATP5G3P48201 142 aa13.02□□□□□ -0.33
GPC1-205ENST00000427506 ICAM4Q14773 271 aa13.02□□□□□ -0.33
GPC1-205ENST00000427506 RNASE8Q8TDE3 154 aaKnown RBP13.02□□□□□ -0.33
GPC1-205ENST00000427506 FAM167A-AS1Q96KT0 104 aa13.02□□□□□ -0.33
GPC1-205ENST00000427506 CBY3A6NI87 242 aa13.01□□□□□ -0.33
GPC1-205ENST00000427506 M0R2N4 97 aa13.01□□□□□ -0.33
GPC1-205ENST00000427506 OR10J4P0C629 311 aa13.01□□□□□ -0.33
GPC1-205ENST00000427506 FAM122CQ6P4D5 195 aa13.01□□□□□ -0.33
GPC1-205ENST00000427506 C15orf53Q8NAA6 179 aa13.01□□□□□ -0.33
GPC1-205ENST00000427506 LINC00477Q96M19 166 aa13.01□□□□□ -0.33
GPC1-205ENST00000427506 PAXXQ9BUH6 204 aa13.01□□□□□ -0.33
GPC1-205ENST00000427506 MBD2Q9UBB5 411 aa13.01□□□□□ -0.33
GPC1-205ENST00000427506 FUT9Q9Y231 359 aa13.01□□□□□ -0.33
GPC1-205ENST00000427506 BIRC6Q9NR09 4857 aa13.01□□□□□ -0.33
GPC1-205ENST00000427506 OR7C2O60412 319 aa13□□□□□ -0.33
GPC1-205ENST00000427506 FFAR4Q5NUL3 377 aa13□□□□□ -0.33
GPC1-205ENST00000427506 RNF141Q8WVD5 230 aa13□□□□□ -0.33
GPC1-205ENST00000427506 SNURFLB1AK76 121 aa12.99□□□□□ -0.33
GPC1-205ENST00000427506 SLC25A5P05141 298 aaKnown RBP12.99□□□□□ -0.33
GPC1-205ENST00000427506 RNF212Q495C1 297 aa12.99□□□□□ -0.33
GPC1-205ENST00000427506 PYGO2Q9BRQ0 406 aa12.99□□□□□ -0.33
GPC1-205ENST00000427506 AGPAT4-IT1Q9H0P7 198 aa12.99□□□□□ -0.33
GPC1-205ENST00000427506 ALG5Q9Y673 324 aa12.99□□□□□ -0.33
GPC1-205ENST00000427506 IGKV2-40A0A087WW87 121 aaPredicted RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms