RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 EMP1P54849 157 aa9.28□□□□□ -0.92
VRK3-203ENST00000424804 FFAR4Q5NUL3 377 aa9.28□□□□□ -0.92
VRK3-203ENST00000424804 BLNKQ8WV28 456 aa9.28□□□□□ -0.92
VRK3-203ENST00000424804 ZNF331Q9NQX6 463 aaPredicted RBP9.28□□□□□ -0.92
VRK3-203ENST00000424804 GOLT1BQ9Y3E0 138 aa9.28□□□□□ -0.92
VRK3-203ENST00000424804 IGLC2P0DOY2 106 aa9.27□□□□□ -0.93
VRK3-203ENST00000424804 ZNF705AQ6ZN79 300 aaPredicted RBP9.27□□□□□ -0.93
VRK3-203ENST00000424804 MIR17HGQ75NE6 70 aa9.27□□□□□ -0.93
VRK3-203ENST00000424804 OR8A1Q8NGG7 326 aa9.27□□□□□ -0.93
VRK3-203ENST00000424804 CHAC2Q8WUX2 184 aa9.27□□□□□ -0.93
VRK3-203ENST00000424804 ZNF586Q9NXT0 402 aa9.27□□□□□ -0.93
VRK3-203ENST00000424804 TIMM9Q9Y5J7 89 aa9.27□□□□□ -0.93
VRK3-203ENST00000424804 ABCA13Q86UQ4 5058 aa9.26□□□□□ -0.93
VRK3-203ENST00000424804 TRAV12-2A0A075B6T6 113 aa9.26□□□□□ -0.93
VRK3-203ENST00000424804 AMBPP02760 352 aa9.26□□□□□ -0.93
VRK3-203ENST00000424804 BAP18Q8IXM2 172 aa9.26□□□□□ -0.93
VRK3-203ENST00000424804 CLUHP3Q96NS8 147 aa9.26□□□□□ -0.93
VRK3-203ENST00000424804 SLC25A2Q9BXI2 301 aa9.26□□□□□ -0.93
VRK3-203ENST00000424804 WFDC1Q9HC57 220 aa9.26□□□□□ -0.93
VRK3-203ENST00000424804 RFNGQ9Y644 331 aa9.26□□□□□ -0.93
VRK3-203ENST00000424804 FXYD6-FXYD2A0A087WZ82 144 aa9.25□□□□□ -0.93
VRK3-203ENST00000424804 DEFB131BA0A096LNP1 70 aa9.25□□□□□ -0.93
VRK3-203ENST00000424804 PRAC2D3DTV9 90 aa9.25□□□□□ -0.93
VRK3-203ENST00000424804 BOLA2-SMG1P6H3BVE0 249 aa9.25□□□□□ -0.93
VRK3-203ENST00000424804 J3KRW8 73 aa9.25□□□□□ -0.93
VRK3-203ENST00000424804 RTL8CO15255 209 aa9.25□□□□□ -0.93
VRK3-203ENST00000424804 OR7C2O60412 319 aa9.25□□□□□ -0.93
VRK3-203ENST00000424804 EIF3GO75821 320 aaKnown RBP eCLIP9.25□□□□□ -0.93
VRK3-203ENST00000424804 INSP01308 110 aa9.25□□□□□ -0.93
VRK3-203ENST00000424804 GIPP09681 153 aaPredicted RBP9.25□□□□□ -0.93
VRK3-203ENST00000424804 OR10J4P0C629 311 aa9.25□□□□□ -0.93
VRK3-203ENST00000424804 GUK1Q16774 197 aa9.25□□□□□ -0.93
VRK3-203ENST00000424804 AMTNQ6UX39 209 aa9.25□□□□□ -0.93
VRK3-203ENST00000424804 OR10J6PQ8NGY7 276 aa9.25□□□□□ -0.93
VRK3-203ENST00000424804 IGF2BP2-AS1Q96M15 143 aa9.25□□□□□ -0.93
VRK3-203ENST00000424804 NEU1Q99519 415 aa9.25□□□□□ -0.93
VRK3-203ENST00000424804 HBE1P02100 147 aa9.24□□□□□ -0.93
VRK3-203ENST00000424804 HIST1H1EP10412 219 aaKnown RBP9.24□□□□□ -0.93
VRK3-203ENST00000424804 HTN1P15515 57 aa9.24□□□□□ -0.93
VRK3-203ENST00000424804 OXA1LQ15070 435 aa9.24□□□□□ -0.93
VRK3-203ENST00000424804 Q5BKY6 102 aa9.24□□□□□ -0.93
VRK3-203ENST00000424804 C1orf158Q8N1D5 194 aa9.24□□□□□ -0.93
VRK3-203ENST00000424804 EXOC3-AS1Q8N2X6 119 aa9.24□□□□□ -0.93
VRK3-203ENST00000424804 SAT2Q96F10 170 aaPredicted RBP9.24□□□□□ -0.93
VRK3-203ENST00000424804 PAXXQ9BUH6 204 aa9.24□□□□□ -0.93
VRK3-203ENST00000424804 MRPL32Q9BYC8 188 aaKnown RBP9.24□□□□□ -0.93
VRK3-203ENST00000424804 PARD6GQ9BYG4 376 aaPredicted RBP9.24□□□□□ -0.93
VRK3-203ENST00000424804 OR51M1Q9H341 326 aa9.24□□□□□ -0.93
VRK3-203ENST00000424804 AAMDCQ9H7C9 122 aa9.24□□□□□ -0.93
VRK3-203ENST00000424804 TMEM14CQ9P0S9 112 aa9.24□□□□□ -0.93
VRK3-203ENST00000424804 FUT9Q9Y231 359 aa9.24□□□□□ -0.93
VRK3-203ENST00000424804 MUC4Q99102 2169 aa9.24□□□□□ -0.93
VRK3-203ENST00000424804 TRBV19A0A075B6N1 114 aa9.23□□□□□ -0.93
VRK3-203ENST00000424804 LOC102723971A0A1B0GUV8 181 aa9.23□□□□□ -0.93
VRK3-203ENST00000424804 M0R3E3 92 aa9.23□□□□□ -0.93
VRK3-203ENST00000424804 RRN3P1Q2M238 152 aa9.23□□□□□ -0.93
VRK3-203ENST00000424804 POM121L12Q8N7R1 296 aa9.23□□□□□ -0.93
VRK3-203ENST00000424804 HSD17B11Q8NBQ5 300 aa9.23□□□□□ -0.93
VRK3-203ENST00000424804 INO80EQ8NBZ0 244 aaPredicted RBP9.23□□□□□ -0.93
VRK3-203ENST00000424804 OR2T35Q8NGX2 323 aa9.23□□□□□ -0.93
VRK3-203ENST00000424804 PLA2G2EQ9NZK7 142 aa9.23□□□□□ -0.93
VRK3-203ENST00000424804 NACAE9PAV3 2078 aa9.23□□□□□ -0.93
VRK3-203ENST00000424804 LRP1BQ9NZR2 4599 aa9.23□□□□□ -0.93
VRK3-203ENST00000424804 HSPG2P98160 4391 aa9.23□□□□□ -0.93
VRK3-203ENST00000424804 A8MTW9 85 aa9.22□□□□□ -0.93
VRK3-203ENST00000424804 ZNF705GA8MUZ8 300 aaPredicted RBP9.22□□□□□ -0.93
VRK3-203ENST00000424804 PRM2P04554 102 aa9.22□□□□□ -0.93
VRK3-203ENST00000424804 NBEAP1P0C6P0 100 aa9.22□□□□□ -0.93
VRK3-203ENST00000424804 UBE2L3P68036 154 aaKnown RBP9.22□□□□□ -0.93
VRK3-203ENST00000424804 ICAM4Q14773 271 aa9.22□□□□□ -0.93
VRK3-203ENST00000424804 ACOT6Q3I5F7 207 aaPredicted RBP9.22□□□□□ -0.93
VRK3-203ENST00000424804 FAM122CQ6P4D5 195 aa9.22□□□□□ -0.93
VRK3-203ENST00000424804 LINC00336Q6ZUF6 198 aa9.22□□□□□ -0.93
VRK3-203ENST00000424804 RNF141Q8WVD5 230 aa9.22□□□□□ -0.93
VRK3-203ENST00000424804 FAM167A-AS1Q96KT0 104 aa9.22□□□□□ -0.93
VRK3-203ENST00000424804 LINC01587Q99440 93 aa9.22□□□□□ -0.93
VRK3-203ENST00000424804 A0A1W2PPV4 95 aa9.21□□□□□ -0.94
VRK3-203ENST00000424804 SMIM9A6NGZ8 99 aa9.21□□□□□ -0.94
VRK3-203ENST00000424804 HMGB3O15347 200 aaKnown RBP9.21□□□□□ -0.94
VRK3-203ENST00000424804 CRXO43186 299 aaPredicted RBP9.21□□□□□ -0.94
VRK3-203ENST00000424804 NDUFB4O95168 129 aa9.21□□□□□ -0.94
VRK3-203ENST00000424804 CDKN1BP46527 198 aa9.21□□□□□ -0.94
VRK3-203ENST00000424804 RAB2AP61019 212 aa9.21□□□□□ -0.94
VRK3-203ENST00000424804 ZNF266Q14584 549 aa9.21□□□□□ -0.94
VRK3-203ENST00000424804 ASB13Q8WXK3 278 aa9.21□□□□□ -0.94
VRK3-203ENST00000424804 AQP10Q96PS8 301 aa9.21□□□□□ -0.94
VRK3-203ENST00000424804 DKK2Q9UBU2 259 aa9.21□□□□□ -0.94
VRK3-203ENST00000424804 TMEM189A5PLL7 270 aa9.2□□□□□ -0.94
VRK3-203ENST00000424804 SMLR1H3BR10 107 aa9.2□□□□□ -0.94
VRK3-203ENST00000424804 ZNF253O75346 499 aa9.2□□□□□ -0.94
VRK3-203ENST00000424804 SPART-AS1P0CW21 52 aa9.2□□□□□ -0.94
VRK3-203ENST00000424804 TSPOP30536 169 aa9.2□□□□□ -0.94
VRK3-203ENST00000424804 TAS2R45P59539 299 aa9.2□□□□□ -0.94
VRK3-203ENST00000424804 ERCC8Q13216 396 aa9.2□□□□□ -0.94
VRK3-203ENST00000424804 PDE6HQ13956 83 aa9.2□□□□□ -0.94
VRK3-203ENST00000424804 KIR3DS1Q14943 382 aa9.2□□□□□ -0.94
VRK3-203ENST00000424804 KHDC3LQ587J8 217 aa9.2□□□□□ -0.94
VRK3-203ENST00000424804 Q6ZR54 194 aa9.2□□□□□ -0.94
VRK3-203ENST00000424804 PHYHIPLQ96FC7 376 aa9.2□□□□□ -0.94
VRK3-203ENST00000424804 PRELID1Q9Y255 219 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms