RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 TMEM213A2RRL7 107 aa9.29□□□□□ -0.92
PTPRN-204ENST00000423636 M0R1W7 72 aa9.29□□□□□ -0.92
PTPRN-204ENST00000423636 PKIAP61925 76 aa9.29□□□□□ -0.92
PTPRN-204ENST00000423636 SIGLEC15Q6ZMC9 328 aa9.29□□□□□ -0.92
PTPRN-204ENST00000423636 C18orf32Q8TCD1 76 aa9.29□□□□□ -0.92
PTPRN-204ENST00000423636 ZNF414Q96IQ9 312 aa9.29□□□□□ -0.92
PTPRN-204ENST00000423636 PSG8Q9UQ74 426 aa9.29□□□□□ -0.92
PTPRN-204ENST00000423636 NPFFO15130 113 aa9.29□□□□□ -0.92
PTPRN-204ENST00000423636 TSKUQ8WUA8 353 aa9.29□□□□□ -0.92
PTPRN-204ENST00000423636 GLMPQ8WWB7 406 aa9.29□□□□□ -0.92
PTPRN-204ENST00000423636 GNB1LQ9BYB4 327 aa9.29□□□□□ -0.92
PTPRN-204ENST00000423636 C7orf69Q9H7B7 122 aa9.29□□□□□ -0.92
PTPRN-204ENST00000423636 HSBP1O75506 76 aa9.28□□□□□ -0.92
PTPRN-204ENST00000423636 NDUFA3O95167 84 aa9.28□□□□□ -0.92
PTPRN-204ENST00000423636 COA6Q5JTJ3 125 aaKnown RBP9.28□□□□□ -0.92
PTPRN-204ENST00000423636 GRAMD2BQ96HH9 432 aa9.28□□□□□ -0.92
PTPRN-204ENST00000423636 KLK15Q9H2R5 256 aa9.28□□□□□ -0.92
PTPRN-204ENST00000423636 DIRC3C9JPN6 131 aa9.28□□□□□ -0.92
PTPRN-204ENST00000423636 H3BUX3 64 aa9.28□□□□□ -0.92
PTPRN-204ENST00000423636 CHEK1O14757 476 aa9.28□□□□□ -0.92
PTPRN-204ENST00000423636 GPX1P07203 203 aa9.28□□□□□ -0.92
PTPRN-204ENST00000423636 BRS3P32247 399 aa9.28□□□□□ -0.92
PTPRN-204ENST00000423636 ZNF80P51504 273 aaPredicted RBP9.28□□□□□ -0.92
PTPRN-204ENST00000423636 MSRB1Q9NZV6 116 aa9.28□□□□□ -0.92
PTPRN-204ENST00000423636 SMAD5-AS1Q9Y6J3 95 aa9.28□□□□□ -0.92
PTPRN-204ENST00000423636 NACAE9PAV3 2078 aa9.27□□□□□ -0.92
PTPRN-204ENST00000423636 H3BRN7 92 aa9.27□□□□□ -0.93
PTPRN-204ENST00000423636 PAX2Q02962 417 aa9.27□□□□□ -0.93
PTPRN-204ENST00000423636 FAM106AQ4KMX7 169 aa9.27□□□□□ -0.93
PTPRN-204ENST00000423636 STXBP6Q8NFX7 210 aa9.27□□□□□ -0.93
PTPRN-204ENST00000423636 NPBQ8NG41 125 aa9.27□□□□□ -0.93
PTPRN-204ENST00000423636 A8MWP6 167 aa9.27□□□□□ -0.93
PTPRN-204ENST00000423636 M0R2Z0 102 aa9.27□□□□□ -0.93
PTPRN-204ENST00000423636 NCR2O95944 276 aa9.27□□□□□ -0.93
PTPRN-204ENST00000423636 LTAP01374 205 aa9.27□□□□□ -0.93
PTPRN-204ENST00000423636 FOSL1P15407 271 aa9.27□□□□□ -0.93
PTPRN-204ENST00000423636 RELQ04864 619 aaPredicted RBP9.27□□□□□ -0.93
PTPRN-204ENST00000423636 CCDC144NLQ6NUI1 221 aa9.27□□□□□ -0.93
PTPRN-204ENST00000423636 MLST8Q9BVC4 326 aa9.27□□□□□ -0.93
PTPRN-204ENST00000423636 TOMM40O96008 361 aa9.26□□□□□ -0.93
PTPRN-204ENST00000423636 IGF1P05019 195 aa9.26□□□□□ -0.93
PTPRN-204ENST00000423636 C3orf79P0CE67 100 aa9.26□□□□□ -0.93
PTPRN-204ENST00000423636 IGLC2P0DOY2 106 aa9.26□□□□□ -0.93
PTPRN-204ENST00000423636 SPATA12Q7Z6I5 190 aa9.26□□□□□ -0.93
PTPRN-204ENST00000423636 ERASQ7Z444 233 aa9.26□□□□□ -0.93
PTPRN-204ENST00000423636 OTORQ9NRC9 128 aa9.26□□□□□ -0.93
PTPRN-204ENST00000423636 GAS8-AS1O95177 125 aa9.26□□□□□ -0.93
PTPRN-204ENST00000423636 ORM1P02763 201 aa9.26□□□□□ -0.93
PTPRN-204ENST00000423636 TFPI2P48307 235 aa9.26□□□□□ -0.93
PTPRN-204ENST00000423636 Q6ZVH6 145 aa9.26□□□□□ -0.93
PTPRN-204ENST00000423636 NIT1Q86X76 327 aa9.26□□□□□ -0.93
PTPRN-204ENST00000423636 LY96Q9Y6Y9 160 aa9.26□□□□□ -0.93
PTPRN-204ENST00000423636 SNAI2O43623 268 aa9.25□□□□□ -0.93
PTPRN-204ENST00000423636 UBE2E1P51965 193 aa9.25□□□□□ -0.93
PTPRN-204ENST00000423636 KRTAP10-9P60411 292 aa9.25□□□□□ -0.93
PTPRN-204ENST00000423636 UNQ9165/PRO28630Q6UXU0 137 aa9.25□□□□□ -0.93
PTPRN-204ENST00000423636 CCDC140Q96MF4 163 aa9.25□□□□□ -0.93
PTPRN-204ENST00000423636 AAMDCQ9H7C9 122 aa9.25□□□□□ -0.93
PTPRN-204ENST00000423636 A8MWL6 223 aa9.25□□□□□ -0.93
PTPRN-204ENST00000423636 HLA-DQA1P01909 254 aa9.25□□□□□ -0.93
PTPRN-204ENST00000423636 WIPF2Q8TF74 440 aaPredicted RBP9.25□□□□□ -0.93
PTPRN-204ENST00000423636 FMC1Q96HJ9 113 aa9.25□□□□□ -0.93
PTPRN-204ENST00000423636 HIF1ANQ9NWT6 349 aa9.25□□□□□ -0.93
PTPRN-204ENST00000423636 ZNF324O75467 553 aaPredicted RBP9.25□□□□□ -0.93
PTPRN-204ENST00000423636 PF4V1P10720 104 aa9.25□□□□□ -0.93
PTPRN-204ENST00000423636 HBBP68871 147 aa9.25□□□□□ -0.93
PTPRN-204ENST00000423636 RABAC1Q9UI14 185 aa9.25□□□□□ -0.93
PTPRN-204ENST00000423636 F6UB75 175 aa9.24□□□□□ -0.93
PTPRN-204ENST00000423636 TRGV3P03979 118 aa9.24□□□□□ -0.93
PTPRN-204ENST00000423636 EBLN2Q6P2I7 272 aa9.24□□□□□ -0.93
PTPRN-204ENST00000423636 WDR73Q6P4I2 378 aa9.24□□□□□ -0.93
PTPRN-204ENST00000423636 URB1-AS1Q96HZ7 61 aa9.24□□□□□ -0.93
PTPRN-204ENST00000423636 KCNS1Q96KK3 526 aa9.24□□□□□ -0.93
PTPRN-204ENST00000423636 ALKBH7Q9BT30 221 aaPredicted RBP9.24□□□□□ -0.93
PTPRN-204ENST00000423636 LYZL1Q6UWQ5 148 aa9.24□□□□□ -0.93
PTPRN-204ENST00000423636 LURAP1LQ8IV03 231 aa9.24□□□□□ -0.93
PTPRN-204ENST00000423636 AMN1Q8IY45 258 aa9.24□□□□□ -0.93
PTPRN-204ENST00000423636 TTC9CQ8N5M4 171 aa9.24□□□□□ -0.93
PTPRN-204ENST00000423636 Q8N6K4 173 aa9.24□□□□□ -0.93
PTPRN-204ENST00000423636 VAMP8Q9BV40 100 aa9.24□□□□□ -0.93
PTPRN-204ENST00000423636 THYN1Q9P016 225 aa9.24□□□□□ -0.93
PTPRN-204ENST00000423636 KIR3DS1Q14943 382 aa9.23□□□□□ -0.93
PTPRN-204ENST00000423636 PSG3Q16557 428 aa9.23□□□□□ -0.93
PTPRN-204ENST00000423636 BORCS7Q96B45 105 aa9.23□□□□□ -0.93
PTPRN-204ENST00000423636 C19orf71A6NCJ1 209 aa9.23□□□□□ -0.93
PTPRN-204ENST00000423636 LOXL1Q08397 574 aaPredicted RBP9.23□□□□□ -0.93
PTPRN-204ENST00000423636 IL17RELQ6ZVW7 336 aa9.23□□□□□ -0.93
PTPRN-204ENST00000423636 KLF12Q9Y4X4 402 aa9.23□□□□□ -0.93
PTPRN-204ENST00000423636 WI2-2373I1.2A0A1W2PRP0 233 aa9.23□□□□□ -0.93
PTPRN-204ENST00000423636 MRPS12O15235 138 aaKnown RBP9.23□□□□□ -0.93
PTPRN-204ENST00000423636 SH2D1AO60880 128 aa9.23□□□□□ -0.93
PTPRN-204ENST00000423636 PVRIGQ6DKI7 326 aa9.23□□□□□ -0.93
PTPRN-204ENST00000423636 CLEC2AQ6UVW9 174 aa9.23□□□□□ -0.93
PTPRN-204ENST00000423636 SNHG12Q9BXW3 62 aa9.23□□□□□ -0.93
PTPRN-204ENST00000423636 FN1P02751 2386 aaKnown RBP9.22□□□□□ -0.93
PTPRN-204ENST00000423636 IGKV3-20P01619 116 aa9.22□□□□□ -0.93
PTPRN-204ENST00000423636 CT45A10P0DMU9 189 aa9.22□□□□□ -0.93
PTPRN-204ENST00000423636 GATA1P15976 413 aaPredicted RBP9.22□□□□□ -0.93
PTPRN-204ENST00000423636 PLP1P60201 277 aa9.22□□□□□ -0.93
PTPRN-204ENST00000423636 UBR5O95071 2799 aaPredicted RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms