RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 AZU1P20160 251 aa13.09□□□□□ -0.31
NPC1L1-203ENST00000423141 C8orf31Q8N9H6 132 aa13.09□□□□□ -0.31
NPC1L1-203ENST00000423141 MSRB1Q9NZV6 116 aa13.09□□□□□ -0.31
NPC1L1-203ENST00000423141 C17orf100A8MU93 164 aa13.09□□□□□ -0.31
NPC1L1-203ENST00000423141 TMEM178BH3BS89 294 aa13.09□□□□□ -0.31
NPC1L1-203ENST00000423141 TWIST1Q15672 202 aa13.09□□□□□ -0.31
NPC1L1-203ENST00000423141 HHLA3Q9XRX5 114 aa13.09□□□□□ -0.31
NPC1L1-203ENST00000423141 PCNX1Q96RV3 2341 aa13.08□□□□□ -0.32
NPC1L1-203ENST00000423141 IGKV2-40A0A087WW87 121 aaPredicted RBP13.08□□□□□ -0.32
NPC1L1-203ENST00000423141 IGKV2D-40P01614 121 aaPredicted RBP13.08□□□□□ -0.32
NPC1L1-203ENST00000423141 SMAGPQ0VAQ4 97 aa13.08□□□□□ -0.32
NPC1L1-203ENST00000423141 CHAC1Q9BUX1 264 aa13.08□□□□□ -0.32
NPC1L1-203ENST00000423141 IGFL2Q6UWQ7 119 aa13.08□□□□□ -0.32
NPC1L1-203ENST00000423141 ZNF491Q8N8L2 437 aa13.08□□□□□ -0.32
NPC1L1-203ENST00000423141 PHLDA1Q8WV24 401 aaPredicted RBP13.08□□□□□ -0.32
NPC1L1-203ENST00000423141 K7EIM0 57 aa13.07□□□□□ -0.32
NPC1L1-203ENST00000423141 EGR2P11161 476 aaPredicted RBP13.07□□□□□ -0.32
NPC1L1-203ENST00000423141 ODF1Q14990 250 aa13.07□□□□□ -0.32
NPC1L1-203ENST00000423141 ADIPOQQ15848 244 aa13.07□□□□□ -0.32
NPC1L1-203ENST00000423141 TMEM155Q4W5P6 130 aa13.07□□□□□ -0.32
NPC1L1-203ENST00000423141 ZNF562Q6V9R5 426 aa13.07□□□□□ -0.32
NPC1L1-203ENST00000423141 Q8TAT8 98 aa13.07□□□□□ -0.32
NPC1L1-203ENST00000423141 RNF125Q96EQ8 232 aa13.07□□□□□ -0.32
NPC1L1-203ENST00000423141 NHP2Q9NX24 153 aaKnown RBP13.07□□□□□ -0.32
NPC1L1-203ENST00000423141 K7EM74 188 aa13.07□□□□□ -0.32
NPC1L1-203ENST00000423141 CEACAM3P40198 252 aa13.07□□□□□ -0.32
NPC1L1-203ENST00000423141 C3orf36Q3SXR2 165 aa13.07□□□□□ -0.32
NPC1L1-203ENST00000423141 GTSCR1Q86UQ5 136 aa13.07□□□□□ -0.32
NPC1L1-203ENST00000423141 ZNF80P51504 273 aaPredicted RBP13.06□□□□□ -0.32
NPC1L1-203ENST00000423141 VGLL1Q99990 258 aa13.06□□□□□ -0.32
NPC1L1-203ENST00000423141 ATMQ13315 3056 aa13.06□□□□□ -0.32
NPC1L1-203ENST00000423141 IGHV1-3A0A0C4DH29 117 aa13.06□□□□□ -0.32
NPC1L1-203ENST00000423141 TNFRSF13BO14836 293 aaPredicted RBP13.06□□□□□ -0.32
NPC1L1-203ENST00000423141 LEPP41159 167 aa13.06□□□□□ -0.32
NPC1L1-203ENST00000423141 KLF17Q5JT82 389 aaPredicted RBP13.06□□□□□ -0.32
NPC1L1-203ENST00000423141 LYPD1Q8N2G4 141 aa13.06□□□□□ -0.32
NPC1L1-203ENST00000423141 TRBV25-1A0A075B6N4 114 aa13.05□□□□□ -0.32
NPC1L1-203ENST00000423141 EVI2AP22794 236 aa13.05□□□□□ -0.32
NPC1L1-203ENST00000423141 WFDC2Q14508 124 aa13.05□□□□□ -0.32
NPC1L1-203ENST00000423141 ZNF575Q86XF7 245 aa13.05□□□□□ -0.32
NPC1L1-203ENST00000423141 TSSC4Q9Y5U2 329 aaPredicted RBP13.05□□□□□ -0.32
NPC1L1-203ENST00000423141 NPIPB5A8MRT5 1133 aa13.05□□□□□ -0.32
NPC1L1-203ENST00000423141 C16orf97H3BN30 126 aa13.05□□□□□ -0.32
NPC1L1-203ENST00000423141 GATA1P15976 413 aaPredicted RBP13.04□□□□□ -0.32
NPC1L1-203ENST00000423141 PLGLAQ15195 96 aa13.04□□□□□ -0.32
NPC1L1-203ENST00000423141 IGFL4Q6B9Z1 124 aa13.04□□□□□ -0.32
NPC1L1-203ENST00000423141 IGFBPL1Q8WX77 278 aa13.04□□□□□ -0.32
NPC1L1-203ENST00000423141 RNF185Q96GF1 192 aa13.04□□□□□ -0.32
NPC1L1-203ENST00000423141 PRSS1P07477 247 aa13.04□□□□□ -0.32
NPC1L1-203ENST00000423141 SPOCK3Q9BQ16 436 aa13.04□□□□□ -0.32
NPC1L1-203ENST00000423141 ZMAT4Q9H898 229 aa13.04□□□□□ -0.32
NPC1L1-203ENST00000423141 AGRNO00468 2067 aa13.03□□□□□ -0.32
NPC1L1-203ENST00000423141 ZGRF1Q86YA3 2104 aa13.03□□□□□ -0.32
NPC1L1-203ENST00000423141 MTURNQ8N3F0 131 aa13.03□□□□□ -0.32
NPC1L1-203ENST00000423141 NUP37Q8NFH4 326 aa13.03□□□□□ -0.32
NPC1L1-203ENST00000423141 AAMDCQ9H7C9 122 aa13.03□□□□□ -0.32
NPC1L1-203ENST00000423141 HIGD1BQ9P298 99 aa13.03□□□□□ -0.32
NPC1L1-203ENST00000423141 C19orf67A6NJJ6 358 aa13.03□□□□□ -0.32
NPC1L1-203ENST00000423141 DEFB109BQ30KR1 87 aa13.03□□□□□ -0.32
NPC1L1-203ENST00000423141 SIGMAR1Q99720 223 aa13.03□□□□□ -0.32
NPC1L1-203ENST00000423141 SVEP1Q4LDE5 3571 aa13.03□□□□□ -0.32
NPC1L1-203ENST00000423141 POLEQ07864 2286 aa13.02□□□□□ -0.32
NPC1L1-203ENST00000423141 CNIH1O95406 144 aa13.02□□□□□ -0.32
NPC1L1-203ENST00000423141 ZC2HC1BQ5TFG8 222 aa13.02□□□□□ -0.32
NPC1L1-203ENST00000423141 SH2D6Q7Z4S9 175 aa13.02□□□□□ -0.32
NPC1L1-203ENST00000423141 S100A7AQ86SG5 101 aa13.02□□□□□ -0.32
NPC1L1-203ENST00000423141 PRR25Q96S07 402 aa13.02□□□□□ -0.32
NPC1L1-203ENST00000423141 FOXC2Q99958 501 aa13.02□□□□□ -0.32
NPC1L1-203ENST00000423141 SPANXB1Q9NS25 103 aaPredicted RBP13.02□□□□□ -0.32
NPC1L1-203ENST00000423141 IGLV1-47P01700 117 aa13.02□□□□□ -0.33
NPC1L1-203ENST00000423141 IGKCP01834 107 aa13.02□□□□□ -0.33
NPC1L1-203ENST00000423141 COX7A1P24310 79 aa13.02□□□□□ -0.33
NPC1L1-203ENST00000423141 CEND1Q8N111 149 aa13.02□□□□□ -0.33
NPC1L1-203ENST00000423141 PIFOQ8TCI5 191 aa13.02□□□□□ -0.33
NPC1L1-203ENST00000423141 MAP1LC3AQ9H492 121 aa13.02□□□□□ -0.33
NPC1L1-203ENST00000423141 FTH1P19P0C7X4 201 aa13.01□□□□□ -0.33
NPC1L1-203ENST00000423141 IGLC6P0CF74 106 aa13.01□□□□□ -0.33
NPC1L1-203ENST00000423141 HLA-DMBP28068 263 aa13.01□□□□□ -0.33
NPC1L1-203ENST00000423141 AMTNQ6UX39 209 aa13.01□□□□□ -0.33
NPC1L1-203ENST00000423141 ARPC1AQ92747 370 aa13.01□□□□□ -0.33
NPC1L1-203ENST00000423141 GAGE12HA6NDE8 117 aa13.01□□□□□ -0.33
NPC1L1-203ENST00000423141 H3BMG7 143 aa13.01□□□□□ -0.33
NPC1L1-203ENST00000423141 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.01□□□□□ -0.33
NPC1L1-203ENST00000423141 CEACAM4O75871 244 aa13.01□□□□□ -0.33
NPC1L1-203ENST00000423141 TMEM108Q6UXF1 575 aa13.01□□□□□ -0.33
NPC1L1-203ENST00000423141 MAPKAPK5-AS1Q8N8E1 139 aa13.01□□□□□ -0.33
NPC1L1-203ENST00000423141 TMEM8BA6NDV4 472 aa13□□□□□ -0.33
NPC1L1-203ENST00000423141 IGLL5B9A064 214 aa13□□□□□ -0.33
NPC1L1-203ENST00000423141 BUB1B-PAK6H3BSN5 160 aa13□□□□□ -0.33
NPC1L1-203ENST00000423141 FCER1GP30273 86 aa13□□□□□ -0.33
NPC1L1-203ENST00000423141 PPIFP30405 207 aaKnown RBP13□□□□□ -0.33
NPC1L1-203ENST00000423141 BSPH1Q075Z2 132 aa13□□□□□ -0.33
NPC1L1-203ENST00000423141 CNOT1A5YKK6 2376 aaKnown RBP13□□□□□ -0.33
NPC1L1-203ENST00000423141 E9PLD3 99 aa13□□□□□ -0.33
NPC1L1-203ENST00000423141 TNFRSF6BO95407 300 aa13□□□□□ -0.33
NPC1L1-203ENST00000423141 ETDBQ3ZM63 59 aa13□□□□□ -0.33
NPC1L1-203ENST00000423141 TMEM158Q8WZ71 300 aa13□□□□□ -0.33
NPC1L1-203ENST00000423141 TNFRSF14Q92956 283 aa13□□□□□ -0.33
NPC1L1-203ENST00000423141 TM2D2Q9BX73 214 aa13□□□□□ -0.33
NPC1L1-203ENST00000423141 TMEM160Q9NX00 188 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms