RNA–Protein interactions for RNA: ENST00000422252.1

SMDT1-202, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 2

Gene SMDT1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-202ENST00000422252 C16orf74Q96GX8 76 aa18.03■□□□□ 0.48
SMDT1-202ENST00000422252 UPK1BO75841 260 aa18.02■□□□□ 0.48
SMDT1-202ENST00000422252 HTN1P15515 57 aa18.02■□□□□ 0.48
SMDT1-202ENST00000422252 LINC00336Q6ZUF6 198 aa18.02■□□□□ 0.48
SMDT1-202ENST00000422252 M0R2N4 97 aa18.01■□□□□ 0.47
SMDT1-202ENST00000422252 FCN2Q15485 313 aa18.01■□□□□ 0.47
SMDT1-202ENST00000422252 C20orf144Q9BQM9 153 aa18.01■□□□□ 0.47
SMDT1-202ENST00000422252 H7BYZ3 331 aa18■□□□□ 0.47
SMDT1-202ENST00000422252 RNF212Q495C1 297 aa18■□□□□ 0.47
SMDT1-202ENST00000422252 C15orf53Q8NAA6 179 aa18■□□□□ 0.47
SMDT1-202ENST00000422252 ZNF586Q9NXT0 402 aa18■□□□□ 0.47
SMDT1-202ENST00000422252 ZNF253O75346 499 aa17.99■□□□□ 0.47
SMDT1-202ENST00000422252 MPDU1O75352 247 aa17.99■□□□□ 0.47
SMDT1-202ENST00000422252 SIX6O95475 246 aa17.99■□□□□ 0.47
SMDT1-202ENST00000422252 KIR3DS1Q14943 382 aa17.99■□□□□ 0.47
SMDT1-202ENST00000422252 LGALS9BQ3B8N2 356 aa17.99■□□□□ 0.47
SMDT1-202ENST00000422252 ZNF493Q6ZR52 646 aa17.99■□□□□ 0.47
SMDT1-202ENST00000422252 PARD6GQ9BYG4 376 aaPredicted RBP17.99■□□□□ 0.47
SMDT1-202ENST00000422252 TIMM8BQ9Y5J9 83 aaPredicted RBP17.99■□□□□ 0.47
SMDT1-202ENST00000422252 RLN2P04090 185 aa17.98■□□□□ 0.47
SMDT1-202ENST00000422252 RNASE8Q8TDE3 154 aaKnown RBP17.98■□□□□ 0.47
SMDT1-202ENST00000422252 TMEM263Q8WUH6 116 aaKnown RBP17.98■□□□□ 0.47
SMDT1-202ENST00000422252 NPCDR1Q9BY65 106 aa17.98■□□□□ 0.47
SMDT1-202ENST00000422252 NMES1Q9C002 83 aa17.98■□□□□ 0.47
SMDT1-202ENST00000422252 DNAH2Q9P225 4427 aa17.97■□□□□ 0.47
SMDT1-202ENST00000422252 IFITM3Q01628 133 aa17.97■□□□□ 0.47
SMDT1-202ENST00000422252 NHLH2Q02577 135 aa17.97■□□□□ 0.47
SMDT1-202ENST00000422252 GFI1BQ5VTD9 330 aa17.97■□□□□ 0.47
SMDT1-202ENST00000422252 TMEM14CQ9P0S9 112 aa17.97■□□□□ 0.47
SMDT1-202ENST00000422252 TRBV19A0A075B6N1 114 aa17.96■□□□□ 0.47
SMDT1-202ENST00000422252 A6NHS1 94 aa17.96■□□□□ 0.47
SMDT1-202ENST00000422252 CBY3A6NI87 242 aa17.96■□□□□ 0.47
SMDT1-202ENST00000422252 E5RGE8 158 aa17.96■□□□□ 0.47
SMDT1-202ENST00000422252 NPIPB6E9PJ23 425 aa17.96■□□□□ 0.47
SMDT1-202ENST00000422252 F5H768 121 aa17.96■□□□□ 0.47
SMDT1-202ENST00000422252 PRAF2O60831 178 aa17.96■□□□□ 0.47
SMDT1-202ENST00000422252 ATP5G1P05496 136 aa17.96■□□□□ 0.47
SMDT1-202ENST00000422252 CT45A10P0DMU9 189 aa17.96■□□□□ 0.47
SMDT1-202ENST00000422252 ATP5G3P48201 142 aa17.96■□□□□ 0.47
SMDT1-202ENST00000422252 OR5C1Q8NGR4 320 aa17.96■□□□□ 0.47
SMDT1-202ENST00000422252 ODF3Q96PU9 254 aa17.96■□□□□ 0.47
SMDT1-202ENST00000422252 SLC25A31Q9H0C2 315 aa17.96■□□□□ 0.47
SMDT1-202ENST00000422252 IGLV2-18A0A075B6J9 118 aa17.95■□□□□ 0.46
SMDT1-202ENST00000422252 LEPP41159 167 aa17.95■□□□□ 0.46
SMDT1-202ENST00000422252 LRRC37A5PQ49AS3 106 aa17.95■□□□□ 0.46
SMDT1-202ENST00000422252 THAP6Q8TBB0 222 aa17.95■□□□□ 0.46
SMDT1-202ENST00000422252 MRPL53Q96EL3 112 aaKnown RBP17.95■□□□□ 0.46
SMDT1-202ENST00000422252 NOP10Q9NPE3 64 aaKnown RBP17.95■□□□□ 0.46
SMDT1-202ENST00000422252 PTTG2Q9NZH5 202 aa17.95■□□□□ 0.46
SMDT1-202ENST00000422252 OR5AC2Q9NZP5 309 aa17.95■□□□□ 0.46
SMDT1-202ENST00000422252 FAT2Q9NYQ8 4349 aa17.94■□□□□ 0.46
SMDT1-202ENST00000422252 DNAH17Q9UFH2 4485 aa17.94■□□□□ 0.46
SMDT1-202ENST00000422252 INMT-MINDY4F8WBC2 141 aa17.94■□□□□ 0.46
SMDT1-202ENST00000422252 HIST1H1EP10412 219 aaKnown RBP17.94■□□□□ 0.46
SMDT1-202ENST00000422252 GCSAMLQ5JQS6 135 aa17.94■□□□□ 0.46
SMDT1-202ENST00000422252 CCDC28AQ8IWP9 274 aa17.94■□□□□ 0.46
SMDT1-202ENST00000422252 J3KRW8 73 aa17.93■□□□□ 0.46
SMDT1-202ENST00000422252 RTL8CO15255 209 aa17.93■□□□□ 0.46
SMDT1-202ENST00000422252 CYCSP99999 105 aaKnown RBP17.93■□□□□ 0.46
SMDT1-202ENST00000422252 PDE6HQ13956 83 aa17.93■□□□□ 0.46
SMDT1-202ENST00000422252 Q6ZR54 194 aa17.93■□□□□ 0.46
SMDT1-202ENST00000422252 TIMM9Q9Y5J7 89 aa17.93■□□□□ 0.46
SMDT1-202ENST00000422252 H0YIZ8 118 aa17.92■□□□□ 0.46
SMDT1-202ENST00000422252 M0R3E3 92 aa17.92■□□□□ 0.46
SMDT1-202ENST00000422252 NDUFB4O95168 129 aa17.92■□□□□ 0.46
SMDT1-202ENST00000422252 PYYP10082 97 aa17.92■□□□□ 0.46
SMDT1-202ENST00000422252 PRELID1Q9Y255 219 aa17.92■□□□□ 0.46
SMDT1-202ENST00000422252 FAM3BP58499 235 aaPredicted RBP17.91■□□□□ 0.46
SMDT1-202ENST00000422252 CLINT1Q14677 625 aa17.91■□□□□ 0.46
SMDT1-202ENST00000422252 BLNKQ8WV28 456 aa17.91■□□□□ 0.46
SMDT1-202ENST00000422252 SLC25A2Q9BXI2 301 aa17.91■□□□□ 0.46
SMDT1-202ENST00000422252 TRAV12-3A0A0B4J271 114 aa17.9■□□□□ 0.46
SMDT1-202ENST00000422252 A0A1B0GVY2 172 aa17.9■□□□□ 0.46
SMDT1-202ENST00000422252 PRSS29PA6NIE9 313 aa17.9■□□□□ 0.46
SMDT1-202ENST00000422252 NUDT3O95989 172 aa17.9■□□□□ 0.46
SMDT1-202ENST00000422252 ATG101Q9BSB4 218 aa17.9■□□□□ 0.46
SMDT1-202ENST00000422252 MARVELD1Q9BSK0 173 aa17.9■□□□□ 0.46
SMDT1-202ENST00000422252 WDR61Q9GZS3 305 aaKnown RBP17.89■□□□□ 0.45
SMDT1-202ENST00000422252 NACAE9PAV3 2078 aa17.89■□□□□ 0.45
SMDT1-202ENST00000422252 SLC25A5P05141 298 aaKnown RBP17.88■□□□□ 0.45
SMDT1-202ENST00000422252 H2BFSP57053 126 aa17.88■□□□□ 0.45
SMDT1-202ENST00000422252 ERCC8Q13216 396 aa17.88■□□□□ 0.45
SMDT1-202ENST00000422252 MIR17HGQ75NE6 70 aa17.88■□□□□ 0.45
SMDT1-202ENST00000422252 EXOC3-AS1Q8N2X6 119 aa17.88■□□□□ 0.45
SMDT1-202ENST00000422252 LINC00612Q8N6U2 182 aa17.88■□□□□ 0.45
SMDT1-202ENST00000422252 PPP1R1CQ8WVI7 109 aa17.88■□□□□ 0.45
SMDT1-202ENST00000422252 FAM167A-AS1Q96KT0 104 aa17.88■□□□□ 0.45
SMDT1-202ENST00000422252 PYGO2Q9BRQ0 406 aa17.88■□□□□ 0.45
SMDT1-202ENST00000422252 AAMDCQ9H7C9 122 aa17.88■□□□□ 0.45
SMDT1-202ENST00000422252 KCNIP2Q9NS61 270 aa17.88■□□□□ 0.45
SMDT1-202ENST00000422252 HERC2O95714 4834 aa17.87■□□□□ 0.45
SMDT1-202ENST00000422252 SNURFLB1AK76 121 aa17.87■□□□□ 0.45
SMDT1-202ENST00000422252 LINC00477Q96M19 166 aa17.87■□□□□ 0.45
SMDT1-202ENST00000422252 DEFA1P59665 94 aa17.86■□□□□ 0.45
SMDT1-202ENST00000422252 DEFA3P59666 94 aa17.86■□□□□ 0.45
SMDT1-202ENST00000422252 RNF141Q8WVD5 230 aa17.86■□□□□ 0.45
SMDT1-202ENST00000422252 MRPL32Q9BYC8 188 aaKnown RBP17.86■□□□□ 0.45
SMDT1-202ENST00000422252 AGPAT4-IT1Q9H0P7 198 aa17.86■□□□□ 0.45
SMDT1-202ENST00000422252 C7orf71A4D174 169 aa17.85■□□□□ 0.45
SMDT1-202ENST00000422252 C17orf112F2Z3M2 114 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms