RNA–Protein interactions for RNA: ENST00000422080.5

HDLBP-208, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-208ENST00000422080 ZNF253O75346 499 aa12.55□□□□□ -0.4
HDLBP-208ENST00000422080 MPDU1O75352 247 aa12.55□□□□□ -0.4
HDLBP-208ENST00000422080 UPK1BO75841 260 aa12.55□□□□□ -0.4
HDLBP-208ENST00000422080 PRB4P10163 310 aaPredicted RBP12.55□□□□□ -0.4
HDLBP-208ENST00000422080 LGALS9BQ3B8N2 356 aa12.55□□□□□ -0.4
HDLBP-208ENST00000422080 ZNF493Q6ZR52 646 aa12.55□□□□□ -0.4
HDLBP-208ENST00000422080 C16orf74Q96GX8 76 aa12.55□□□□□ -0.4
HDLBP-208ENST00000422080 DNAH17Q9UFH2 4485 aa12.54□□□□□ -0.4
HDLBP-208ENST00000422080 A6NHS1 94 aa12.54□□□□□ -0.4
HDLBP-208ENST00000422080 RLN2P04090 185 aa12.54□□□□□ -0.4
HDLBP-208ENST00000422080 DEFB130BP0DP73 79 aa12.54□□□□□ -0.4
HDLBP-208ENST00000422080 DEFB130AP0DP74 79 aa12.54□□□□□ -0.4
HDLBP-208ENST00000422080 FGF7P21781 194 aa12.54□□□□□ -0.4
HDLBP-208ENST00000422080 UBE2DNLQ8IWF7 75 aa12.54□□□□□ -0.4
HDLBP-208ENST00000422080 C15orf53Q8NAA6 179 aa12.54□□□□□ -0.4
HDLBP-208ENST00000422080 ZNF586Q9NXT0 402 aa12.54□□□□□ -0.4
HDLBP-208ENST00000422080 TMEM14CQ9P0S9 112 aa12.54□□□□□ -0.4
HDLBP-208ENST00000422080 CBY3A6NI87 242 aa12.53□□□□□ -0.4
HDLBP-208ENST00000422080 PRAF2O60831 178 aa12.53□□□□□ -0.4
HDLBP-208ENST00000422080 HTN1P15515 57 aa12.53□□□□□ -0.4
HDLBP-208ENST00000422080 ODF3Q96PU9 254 aa12.53□□□□□ -0.4
HDLBP-208ENST00000422080 NMES1Q9C002 83 aa12.53□□□□□ -0.4
HDLBP-208ENST00000422080 SLC25A31Q9H0C2 315 aa12.53□□□□□ -0.4
HDLBP-208ENST00000422080 TIMM8BQ9Y5J9 83 aaPredicted RBP12.53□□□□□ -0.4
HDLBP-208ENST00000422080 FAT2Q9NYQ8 4349 aa12.53□□□□□ -0.4
HDLBP-208ENST00000422080 TRBV19A0A075B6N1 114 aa12.52□□□□□ -0.41
HDLBP-208ENST00000422080 E5RGE8 158 aa12.52□□□□□ -0.41
HDLBP-208ENST00000422080 CYCSP99999 105 aaKnown RBP12.52□□□□□ -0.41
HDLBP-208ENST00000422080 IFITM3Q01628 133 aa12.52□□□□□ -0.41
HDLBP-208ENST00000422080 KIR3DS1Q14943 382 aa12.52□□□□□ -0.41
HDLBP-208ENST00000422080 FCN2Q15485 313 aa12.52□□□□□ -0.41
HDLBP-208ENST00000422080 RNASE8Q8TDE3 154 aaKnown RBP12.52□□□□□ -0.41
HDLBP-208ENST00000422080 TMEM263Q8WUH6 116 aaKnown RBP12.52□□□□□ -0.41
HDLBP-208ENST00000422080 MRPL53Q96EL3 112 aaKnown RBP12.52□□□□□ -0.41
HDLBP-208ENST00000422080 NPCDR1Q9BY65 106 aa12.52□□□□□ -0.41
HDLBP-208ENST00000422080 INMT-MINDY4F8WBC2 141 aa12.51□□□□□ -0.41
HDLBP-208ENST00000422080 M0R2N4 97 aa12.51□□□□□ -0.41
HDLBP-208ENST00000422080 SIX6O95475 246 aa12.51□□□□□ -0.41
HDLBP-208ENST00000422080 ATP5G1P05496 136 aa12.51□□□□□ -0.41
HDLBP-208ENST00000422080 CT45A10P0DMU9 189 aa12.51□□□□□ -0.41
HDLBP-208ENST00000422080 HIST1H1EP10412 219 aaKnown RBP12.51□□□□□ -0.41
HDLBP-208ENST00000422080 ATP5G3P48201 142 aa12.51□□□□□ -0.41
HDLBP-208ENST00000422080 NHLH2Q02577 135 aa12.51□□□□□ -0.41
HDLBP-208ENST00000422080 GFI1BQ5VTD9 330 aa12.51□□□□□ -0.41
HDLBP-208ENST00000422080 PTTG2Q9NZH5 202 aa12.51□□□□□ -0.41
HDLBP-208ENST00000422080 NPIPB6E9PJ23 425 aa12.5□□□□□ -0.41
HDLBP-208ENST00000422080 F5H768 121 aa12.5□□□□□ -0.41
HDLBP-208ENST00000422080 LEPP41159 167 aa12.5□□□□□ -0.41
HDLBP-208ENST00000422080 FAM3BP58499 235 aaPredicted RBP12.5□□□□□ -0.41
HDLBP-208ENST00000422080 PDE6HQ13956 83 aa12.5□□□□□ -0.41
HDLBP-208ENST00000422080 CCDC28AQ8IWP9 274 aa12.5□□□□□ -0.41
HDLBP-208ENST00000422080 OR5C1Q8NGR4 320 aa12.5□□□□□ -0.41
HDLBP-208ENST00000422080 PARD6GQ9BYG4 376 aaPredicted RBP12.5□□□□□ -0.41
HDLBP-208ENST00000422080 PRELID1Q9Y255 219 aa12.5□□□□□ -0.41
HDLBP-208ENST00000422080 Q6ZR54 194 aa12.49□□□□□ -0.41
HDLBP-208ENST00000422080 MARVELD1Q9BSK0 173 aa12.49□□□□□ -0.41
HDLBP-208ENST00000422080 NOP10Q9NPE3 64 aaKnown RBP12.49□□□□□ -0.41
HDLBP-208ENST00000422080 OR5AC2Q9NZP5 309 aa12.49□□□□□ -0.41
HDLBP-208ENST00000422080 TIMM9Q9Y5J7 89 aa12.49□□□□□ -0.41
HDLBP-208ENST00000422080 H0YIZ8 118 aa12.48□□□□□ -0.41
HDLBP-208ENST00000422080 RTL8CO15255 209 aa12.48□□□□□ -0.41
HDLBP-208ENST00000422080 NDUFB4O95168 129 aa12.48□□□□□ -0.41
HDLBP-208ENST00000422080 GCSAMLQ5JQS6 135 aa12.48□□□□□ -0.41
HDLBP-208ENST00000422080 LINC00477Q96M19 166 aa12.48□□□□□ -0.41
HDLBP-208ENST00000422080 IGLV2-18A0A075B6J9 118 aa12.47□□□□□ -0.41
HDLBP-208ENST00000422080 M0R3E3 92 aa12.47□□□□□ -0.41
HDLBP-208ENST00000422080 PYYP10082 97 aa12.47□□□□□ -0.41
HDLBP-208ENST00000422080 LRRC37A5PQ49AS3 106 aa12.47□□□□□ -0.41
HDLBP-208ENST00000422080 LINC00612Q8N6U2 182 aa12.47□□□□□ -0.41
HDLBP-208ENST00000422080 THAP6Q8TBB0 222 aa12.47□□□□□ -0.41
HDLBP-208ENST00000422080 KCNIP2Q9NS61 270 aa12.47□□□□□ -0.41
HDLBP-208ENST00000422080 TRAV12-3A0A0B4J271 114 aa12.46□□□□□ -0.41
HDLBP-208ENST00000422080 A0A1B0GVY2 172 aa12.46□□□□□ -0.41
HDLBP-208ENST00000422080 PRSS29PA6NIE9 313 aa12.46□□□□□ -0.41
HDLBP-208ENST00000422080 SLC25A5P05141 298 aaKnown RBP12.46□□□□□ -0.41
HDLBP-208ENST00000422080 CLINT1Q14677 625 aa12.46□□□□□ -0.41
HDLBP-208ENST00000422080 FAM167A-AS1Q96KT0 104 aa12.46□□□□□ -0.41
HDLBP-208ENST00000422080 PYGO2Q9BRQ0 406 aa12.46□□□□□ -0.41
HDLBP-208ENST00000422080 ATG101Q9BSB4 218 aa12.46□□□□□ -0.41
HDLBP-208ENST00000422080 SLC25A2Q9BXI2 301 aa12.46□□□□□ -0.41
HDLBP-208ENST00000422080 WDR61Q9GZS3 305 aaKnown RBP12.46□□□□□ -0.41
HDLBP-208ENST00000422080 J3KRW8 73 aa12.45□□□□□ -0.42
HDLBP-208ENST00000422080 H2BFSP57053 126 aa12.45□□□□□ -0.42
HDLBP-208ENST00000422080 DEFA1P59665 94 aa12.45□□□□□ -0.42
HDLBP-208ENST00000422080 DEFA3P59666 94 aa12.45□□□□□ -0.42
HDLBP-208ENST00000422080 MIR17HGQ75NE6 70 aa12.45□□□□□ -0.42
HDLBP-208ENST00000422080 BLNKQ8WV28 456 aa12.45□□□□□ -0.42
HDLBP-208ENST00000422080 PPP1R1CQ8WVI7 109 aa12.45□□□□□ -0.42
HDLBP-208ENST00000422080 FAM19A4Q96LR4 140 aa12.45□□□□□ -0.42
HDLBP-208ENST00000422080 MRPL32Q9BYC8 188 aaKnown RBP12.45□□□□□ -0.42
HDLBP-208ENST00000422080 AGPAT4-IT1Q9H0P7 198 aa12.45□□□□□ -0.42
HDLBP-208ENST00000422080 AAMDCQ9H7C9 122 aa12.45□□□□□ -0.42
HDLBP-208ENST00000422080 HERC2O95714 4834 aa12.44□□□□□ -0.42
HDLBP-208ENST00000422080 SNURFLB1AK76 121 aa12.44□□□□□ -0.42
HDLBP-208ENST00000422080 KLLNB2CW77 178 aa12.44□□□□□ -0.42
HDLBP-208ENST00000422080 NUDT3O95989 172 aa12.44□□□□□ -0.42
HDLBP-208ENST00000422080 NBEAP1P0C6P0 100 aa12.44□□□□□ -0.42
HDLBP-208ENST00000422080 ERCC8Q13216 396 aa12.44□□□□□ -0.42
HDLBP-208ENST00000422080 C9orf47Q6ZRZ4 202 aa12.44□□□□□ -0.42
HDLBP-208ENST00000422080 EXOC3-AS1Q8N2X6 119 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms