RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 USP34Q70CQ2 3546 aa7.7□□□□□ -1.18
CMSS1-201ENST00000421999 TRGV11A0A075B6L2 103 aa7.7□□□□□ -1.18
CMSS1-201ENST00000421999 ZNF324O75467 553 aaPredicted RBP7.7□□□□□ -1.18
CMSS1-201ENST00000421999 IGHV3-53P01767 116 aa7.7□□□□□ -1.18
CMSS1-201ENST00000421999 TRGC2P03986 189 aa7.7□□□□□ -1.18
CMSS1-201ENST00000421999 CBLN1P23435 193 aa7.7□□□□□ -1.18
CMSS1-201ENST00000421999 POU2AF1Q16633 256 aa7.7□□□□□ -1.18
CMSS1-201ENST00000421999 MUC3AQ02505 3323 aa7.7□□□□□ -1.18
CMSS1-201ENST00000421999 HIGD1CA8MV81 97 aa7.7□□□□□ -1.18
CMSS1-201ENST00000421999 YPEL3P61236 119 aaPredicted RBP7.7□□□□□ -1.18
CMSS1-201ENST00000421999 IGHV7-81A0A0B4J1V7 117 aa7.69□□□□□ -1.18
CMSS1-201ENST00000421999 CRXO43186 299 aaPredicted RBP7.69□□□□□ -1.18
CMSS1-201ENST00000421999 HOXD3P31249 432 aaPredicted RBP7.69□□□□□ -1.18
CMSS1-201ENST00000421999 HSPB8Q9UJY1 196 aa7.69□□□□□ -1.18
CMSS1-201ENST00000421999 MIEN1Q9BRT3 115 aa7.69□□□□□ -1.18
CMSS1-201ENST00000421999 SHANK2-AS3Q9BTD1 123 aa7.69□□□□□ -1.18
CMSS1-201ENST00000421999 SIRPDQ9H106 197 aa7.69□□□□□ -1.18
CMSS1-201ENST00000421999 NDUFA4O00483 81 aa7.69□□□□□ -1.18
CMSS1-201ENST00000421999 TCRAP04437 139 aa7.69□□□□□ -1.18
CMSS1-201ENST00000421999 KRTAP10-9P60411 292 aa7.69□□□□□ -1.18
CMSS1-201ENST00000421999 ZNF415Q09FC8 603 aa7.69□□□□□ -1.18
CMSS1-201ENST00000421999 PSG3Q16557 428 aa7.69□□□□□ -1.18
CMSS1-201ENST00000421999 UBE2DNLQ8IWF7 75 aa7.69□□□□□ -1.18
CMSS1-201ENST00000421999 RCHY1Q96PM5 261 aa7.69□□□□□ -1.18
CMSS1-201ENST00000421999 GSN-AS1Q9NRJ2 163 aa7.69□□□□□ -1.18
CMSS1-201ENST00000421999 SNCGO76070 127 aa7.68□□□□□ -1.18
CMSS1-201ENST00000421999 INSP01308 110 aa7.68□□□□□ -1.18
CMSS1-201ENST00000421999 SPINK13Q1W4C9 94 aa7.68□□□□□ -1.18
CMSS1-201ENST00000421999 RNF182Q8N6D2 247 aa7.68□□□□□ -1.18
CMSS1-201ENST00000421999 MBD3L1Q8WWY6 194 aa7.68□□□□□ -1.18
CMSS1-201ENST00000421999 LINC00477Q96M19 166 aa7.68□□□□□ -1.18
CMSS1-201ENST00000421999 GEMIN7Q9H840 131 aaKnown RBP7.68□□□□□ -1.18
CMSS1-201ENST00000421999 TGIF2-C20orf24A0A0A6YYL0 155 aa7.68□□□□□ -1.18
CMSS1-201ENST00000421999 CA1P00915 261 aaPredicted RBP7.68□□□□□ -1.18
CMSS1-201ENST00000421999 IGHV4-31P0DP07 118 aa7.68□□□□□ -1.18
CMSS1-201ENST00000421999 IQCJQ1A5X6 159 aa7.68□□□□□ -1.18
CMSS1-201ENST00000421999 OCC1Q8TAD7 63 aa7.68□□□□□ -1.18
CMSS1-201ENST00000421999 TMEM158Q8WZ71 300 aa7.68□□□□□ -1.18
CMSS1-201ENST00000421999 HSPB9Q9BQS6 159 aa7.68□□□□□ -1.18
CMSS1-201ENST00000421999 MRPL27Q9P0M9 148 aaKnown RBP7.68□□□□□ -1.18
CMSS1-201ENST00000421999 PRSS57Q6UWY2 283 aa7.68□□□□□ -1.18
CMSS1-201ENST00000421999 Q8N9W7 124 aa7.68□□□□□ -1.18
CMSS1-201ENST00000421999 LY6G5BQ8NDX9 201 aa7.68□□□□□ -1.18
CMSS1-201ENST00000421999 AP5S1Q9NUS5 200 aa7.68□□□□□ -1.18
CMSS1-201ENST00000421999 DMXL1Q9Y485 3027 aa7.68□□□□□ -1.18
CMSS1-201ENST00000421999 ANKRD17O75179 2603 aaKnown RBP7.67□□□□□ -1.18
CMSS1-201ENST00000421999 A0A087X0M5 115 aa7.67□□□□□ -1.18
CMSS1-201ENST00000421999 IGHV3-73A0A0B4J1V6 119 aa7.67□□□□□ -1.18
CMSS1-201ENST00000421999 A0A1B0GX30 115 aa7.67□□□□□ -1.18
CMSS1-201ENST00000421999 FOLR2P14207 255 aa7.67□□□□□ -1.18
CMSS1-201ENST00000421999 SUMO2P61956 95 aaKnown RBP7.67□□□□□ -1.18
CMSS1-201ENST00000421999 SRSF3P84103 164 aaKnown RBP7.67□□□□□ -1.18
CMSS1-201ENST00000421999 C1orf229Q6ZS94 237 aaPredicted RBP7.67□□□□□ -1.18
CMSS1-201ENST00000421999 HAPLN4Q86UW8 402 aa7.67□□□□□ -1.18
CMSS1-201ENST00000421999 IGLC7A0M8Q6 106 aa7.67□□□□□ -1.18
CMSS1-201ENST00000421999 Q6AWC8 147 aa7.67□□□□□ -1.18
CMSS1-201ENST00000421999 OR4C5Q8NGB2 326 aa7.67□□□□□ -1.18
CMSS1-201ENST00000421999 PRELID3AQ96N28 172 aa7.67□□□□□ -1.18
CMSS1-201ENST00000421999 RPL23P62829 140 aaKnown RBP7.67□□□□□ -1.18
CMSS1-201ENST00000421999 ST6GALNAC6Q969X2 333 aa7.67□□□□□ -1.18
CMSS1-201ENST00000421999 TMEM101Q96IK0 257 aa7.67□□□□□ -1.18
CMSS1-201ENST00000421999 LEPROTL1O95214 131 aa7.66□□□□□ -1.18
CMSS1-201ENST00000421999 IGLC1P0CG04 106 aa7.66□□□□□ -1.18
CMSS1-201ENST00000421999 SLURP1P55000 103 aa7.66□□□□□ -1.18
CMSS1-201ENST00000421999 C1QL4Q86Z23 238 aa7.66□□□□□ -1.18
CMSS1-201ENST00000421999 LINC00574Q9H8X3 128 aa7.66□□□□□ -1.18
CMSS1-201ENST00000421999 IL36BQ9NZH7 164 aa7.66□□□□□ -1.18
CMSS1-201ENST00000421999 CLPSL1A2RUU4 121 aa7.66□□□□□ -1.18
CMSS1-201ENST00000421999 FNDC10F2Z333 226 aa7.66□□□□□ -1.18
CMSS1-201ENST00000421999 LGALS1P09382 135 aaKnown RBP7.66□□□□□ -1.18
CMSS1-201ENST00000421999 GZMBP10144 247 aa7.66□□□□□ -1.18
CMSS1-201ENST00000421999 SRSF9Q13242 221 aaKnown RBP eCLIP7.66□□□□□ -1.18
CMSS1-201ENST00000421999 TMEM97Q5BJF2 176 aa7.66□□□□□ -1.18
CMSS1-201ENST00000421999 CHCHD5Q9BSY4 110 aa7.66□□□□□ -1.18
CMSS1-201ENST00000421999 A0A087WX48 190 aa7.66□□□□□ -1.18
CMSS1-201ENST00000421999 DNAJC9-AS1A6NH13 148 aa7.66□□□□□ -1.18
CMSS1-201ENST00000421999 PPP1R17O96001 155 aa7.66□□□□□ -1.18
CMSS1-201ENST00000421999 BRWD1-AS2P59051 145 aa7.66□□□□□ -1.18
CMSS1-201ENST00000421999 ERCC8Q13216 396 aa7.66□□□□□ -1.18
CMSS1-201ENST00000421999 PAPPA-AS1Q5QFB9 102 aa7.66□□□□□ -1.18
CMSS1-201ENST00000421999 C18orf15Q96N68 181 aa7.66□□□□□ -1.18
CMSS1-201ENST00000421999 FNDC4Q9H6D8 234 aaPredicted RBP7.66□□□□□ -1.18
CMSS1-201ENST00000421999 FRYQ5TBA9 3013 aa7.66□□□□□ -1.18
CMSS1-201ENST00000421999 A0A1B0GV90 55 aa7.66□□□□□ -1.18
CMSS1-201ENST00000421999 TTC9CQ8N5M4 171 aa7.66□□□□□ -1.18
CMSS1-201ENST00000421999 FSTL3O95633 263 aa7.65□□□□□ -1.18
CMSS1-201ENST00000421999 C5orf56Q8N8D9 126 aa7.65□□□□□ -1.18
CMSS1-201ENST00000421999 DERL1Q9BUN8 251 aa7.65□□□□□ -1.18
CMSS1-201ENST00000421999 MYO15AQ9UKN7 3530 aa7.65□□□□□ -1.18
CMSS1-201ENST00000421999 USP24Q9UPU5 2620 aa7.65□□□□□ -1.18
CMSS1-201ENST00000421999 DMXL2Q8TDJ6 3036 aa7.65□□□□□ -1.18
CMSS1-201ENST00000421999 KNCNA6PVL3 124 aa7.65□□□□□ -1.18
CMSS1-201ENST00000421999 H3BUA1 57 aa7.65□□□□□ -1.18
CMSS1-201ENST00000421999 NDUFS6O75380 124 aaKnown RBP7.65□□□□□ -1.18
CMSS1-201ENST00000421999 HNRNPA3P51991 378 aaKnown RBP7.65□□□□□ -1.18
CMSS1-201ENST00000421999 FOXE3Q13461 319 aa7.65□□□□□ -1.18
CMSS1-201ENST00000421999 LINC00479Q96M42 142 aa7.65□□□□□ -1.18
CMSS1-201ENST00000421999 IMMP2LQ96T52 175 aa7.65□□□□□ -1.18
CMSS1-201ENST00000421999 OR9G4Q8NGQ1 327 aa7.65□□□□□ -1.19
CMSS1-201ENST00000421999 E7EUB6 86 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms