RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 COA6Q5JTJ3 125 aaKnown RBP6.82□□□□□ -1.32
SNCA-206ENST00000420646 BAGE3Q86Y29 109 aa6.82□□□□□ -1.32
SNCA-206ENST00000420646 BMPR1BO00238 502 aa6.81□□□□□ -1.32
SNCA-206ENST00000420646 P01737 135 aa6.81□□□□□ -1.32
SNCA-206ENST00000420646 GBGT1Q8N5D6 347 aa6.81□□□□□ -1.32
SNCA-206ENST00000420646 ARL6IP6Q8N6S5 226 aa6.81□□□□□ -1.32
SNCA-206ENST00000420646 FMC1Q96HJ9 113 aa6.81□□□□□ -1.32
SNCA-206ENST00000420646 HIVEP1P15822 2718 aa6.81□□□□□ -1.32
SNCA-206ENST00000420646 TRAV30A0A087WSZ9 112 aa6.81□□□□□ -1.32
SNCA-206ENST00000420646 RNF223E7ERA6 249 aa6.81□□□□□ -1.32
SNCA-206ENST00000420646 RABAC1Q9UI14 185 aa6.81□□□□□ -1.32
SNCA-206ENST00000420646 RNF114Q9Y508 228 aa6.81□□□□□ -1.32
SNCA-206ENST00000420646 TRAV41A0A0B4J266 112 aa6.81□□□□□ -1.32
SNCA-206ENST00000420646 IZUMO1RA6ND01 250 aa6.81□□□□□ -1.32
SNCA-206ENST00000420646 DIRC3C9JPN6 131 aa6.81□□□□□ -1.32
SNCA-206ENST00000420646 PRAC2D3DTV9 90 aa6.81□□□□□ -1.32
SNCA-206ENST00000420646 M0QZ24 198 aa6.81□□□□□ -1.32
SNCA-206ENST00000420646 TGFAP01135 160 aa6.81□□□□□ -1.32
SNCA-206ENST00000420646 FOXA3P55318 350 aaPredicted RBP6.81□□□□□ -1.32
SNCA-206ENST00000420646 C10orf99Q6UWK7 81 aa6.81□□□□□ -1.32
SNCA-206ENST00000420646 FAM19A2Q8N3H0 131 aa6.81□□□□□ -1.32
SNCA-206ENST00000420646 DAZAP1Q96EP5 407 aaKnown RBP6.81□□□□□ -1.32
SNCA-206ENST00000420646 GRAMD2BQ96HH9 432 aa6.81□□□□□ -1.32
SNCA-206ENST00000420646 VGLL1Q99990 258 aa6.81□□□□□ -1.32
SNCA-206ENST00000420646 GNB1LQ9BYB4 327 aa6.81□□□□□ -1.32
SNCA-206ENST00000420646 ZNF331Q9NQX6 463 aaPredicted RBP6.81□□□□□ -1.32
SNCA-206ENST00000420646 PPP1R14DQ9NXH3 145 aa6.81□□□□□ -1.32
SNCA-206ENST00000420646 PSG8Q9UQ74 426 aa6.81□□□□□ -1.32
SNCA-206ENST00000420646 MOB4Q9Y3A3 225 aa6.81□□□□□ -1.32
SNCA-206ENST00000420646 IGKV3-7A0A075B6H7 116 aa6.8□□□□□ -1.32
SNCA-206ENST00000420646 TRBV9A0A0B4J1U6 114 aa6.8□□□□□ -1.32
SNCA-206ENST00000420646 CLPSL1A2RUU4 121 aa6.8□□□□□ -1.32
SNCA-206ENST00000420646 IGHG4P01861 327 aa6.8□□□□□ -1.32
SNCA-206ENST00000420646 TRGV3P03979 118 aa6.8□□□□□ -1.32
SNCA-206ENST00000420646 ERCC8Q13216 396 aa6.8□□□□□ -1.32
SNCA-206ENST00000420646 TSKUQ8WUA8 353 aa6.8□□□□□ -1.32
SNCA-206ENST00000420646 RPP21Q9H633 154 aaKnown RBP6.8□□□□□ -1.32
SNCA-206ENST00000420646 POLR3KQ9Y2Y1 108 aaPredicted RBP6.8□□□□□ -1.32
SNCA-206ENST00000420646 SORL1Q92673 2214 aa6.8□□□□□ -1.32
SNCA-206ENST00000420646 C19orf71A6NCJ1 209 aa6.8□□□□□ -1.32
SNCA-206ENST00000420646 EREGO14944 169 aa6.8□□□□□ -1.32
SNCA-206ENST00000420646 ZNF253O75346 499 aa6.8□□□□□ -1.32
SNCA-206ENST00000420646 DEFB1P60022 68 aa6.8□□□□□ -1.32
SNCA-206ENST00000420646 UNQ9165/PRO28630Q6UXU0 137 aa6.8□□□□□ -1.32
SNCA-206ENST00000420646 FAM231DQ6ZW35 169 aa6.8□□□□□ -1.32
SNCA-206ENST00000420646 DUX5Q96PT3 197 aa6.8□□□□□ -1.32
SNCA-206ENST00000420646 SPOCK3Q9BQ16 436 aa6.8□□□□□ -1.32
SNCA-206ENST00000420646 ZFAND3Q9H8U3 227 aa6.8□□□□□ -1.32
SNCA-206ENST00000420646 OTOGQ6ZRI0 2925 aa6.8□□□□□ -1.32
SNCA-206ENST00000420646 IGHV4-59P01825 116 aa6.79□□□□□ -1.32
SNCA-206ENST00000420646 APCSP02743 223 aa6.79□□□□□ -1.32
SNCA-206ENST00000420646 ZNF705DP0CH99 300 aaPredicted RBP6.79□□□□□ -1.32
SNCA-206ENST00000420646 ZNF705BP0CI00 300 aaPredicted RBP6.79□□□□□ -1.32
SNCA-206ENST00000420646 COX6B1P14854 86 aa6.79□□□□□ -1.32
SNCA-206ENST00000420646 NUTF2P61970 127 aaKnown RBP6.79□□□□□ -1.32
SNCA-206ENST00000420646 TMEM75Q8N9X5 138 aa6.79□□□□□ -1.32
SNCA-206ENST00000420646 TMEM18Q96B42 140 aa6.79□□□□□ -1.32
SNCA-206ENST00000420646 PRSS22Q9GZN4 317 aa6.79□□□□□ -1.32
SNCA-206ENST00000420646 B4DSR2 109 aa6.79□□□□□ -1.32
SNCA-206ENST00000420646 NDUFS8O00217 210 aa6.79□□□□□ -1.32
SNCA-206ENST00000420646 TPPP2P59282 170 aa6.79□□□□□ -1.32
SNCA-206ENST00000420646 PSG3Q16557 428 aa6.79□□□□□ -1.32
SNCA-206ENST00000420646 TDRG1Q3Y452 100 aa6.79□□□□□ -1.32
SNCA-206ENST00000420646 HIST2H2BDQ6DRA6 164 aa6.79□□□□□ -1.32
SNCA-206ENST00000420646 CHEK1O14757 476 aa6.79□□□□□ -1.32
SNCA-206ENST00000420646 BUB3O43684 328 aa6.79□□□□□ -1.32
SNCA-206ENST00000420646 SCGB1D1O95968 90 aa6.79□□□□□ -1.32
SNCA-206ENST00000420646 PMCHP20382 165 aa6.79□□□□□ -1.32
SNCA-206ENST00000420646 EDN2P20800 178 aa6.79□□□□□ -1.32
SNCA-206ENST00000420646 JOSD1Q15040 202 aaPredicted RBP6.79□□□□□ -1.32
SNCA-206ENST00000420646 Q6ZQT7 251 aa6.79□□□□□ -1.32
SNCA-206ENST00000420646 Q6ZWC4 215 aa6.79□□□□□ -1.32
SNCA-206ENST00000420646 AAMDCQ9H7C9 122 aa6.79□□□□□ -1.32
SNCA-206ENST00000420646 PF4V1P10720 104 aa6.78□□□□□ -1.32
SNCA-206ENST00000420646 ATP5G2Q06055 141 aa6.78□□□□□ -1.32
SNCA-206ENST00000420646 DEFB112Q30KQ8 113 aa6.78□□□□□ -1.32
SNCA-206ENST00000420646 VN1R17PQ8TDU5 208 aa6.78□□□□□ -1.32
SNCA-206ENST00000420646 ZNF48Q96MX3 618 aaPredicted RBP6.78□□□□□ -1.32
SNCA-206ENST00000420646 CBY1Q9Y3M2 126 aa6.78□□□□□ -1.32
SNCA-206ENST00000420646 AKAP9Q99996 3911 aa6.78□□□□□ -1.32
SNCA-206ENST00000420646 TRAV9-1A0A075B6T8 112 aa6.78□□□□□ -1.32
SNCA-206ENST00000420646 ZNF25P17030 456 aaPredicted RBP6.78□□□□□ -1.32
SNCA-206ENST00000420646 RPL7P18124 248 aaKnown RBP6.78□□□□□ -1.32
SNCA-206ENST00000420646 ZNF80P51504 273 aaPredicted RBP6.78□□□□□ -1.32
SNCA-206ENST00000420646 SAMD10Q9BYL1 202 aa6.78□□□□□ -1.32
SNCA-206ENST00000420646 MEGF9Q9H1U4 602 aa6.78□□□□□ -1.32
SNCA-206ENST00000420646 NTF3P20783 257 aa6.77□□□□□ -1.33
SNCA-206ENST00000420646 ZNF138P52744 262 aa6.77□□□□□ -1.33
SNCA-206ENST00000420646 PMCHL1Q16048 86 aa6.77□□□□□ -1.33
SNCA-206ENST00000420646 EEF1AKMT3Q96AZ1 226 aa6.77□□□□□ -1.33
SNCA-206ENST00000420646 ATRQ13535 2644 aa6.77□□□□□ -1.33
SNCA-206ENST00000420646 A8MWL6 223 aa6.77□□□□□ -1.33
SNCA-206ENST00000420646 ARMS2P0C7Q2 107 aa6.77□□□□□ -1.33
SNCA-206ENST00000420646 LCN12Q6JVE5 192 aa6.77□□□□□ -1.33
SNCA-206ENST00000420646 WDR73Q6P4I2 378 aa6.77□□□□□ -1.33
SNCA-206ENST00000420646 ZNF664Q8N3J9 261 aa6.77□□□□□ -1.33
SNCA-206ENST00000420646 PDZD2O15018 2839 aa6.77□□□□□ -1.33
SNCA-206ENST00000420646 A6NDX4 124 aa6.76□□□□□ -1.33
SNCA-206ENST00000420646 A8MWP6 167 aa6.76□□□□□ -1.33
SNCA-206ENST00000420646 SMAD7O15105 426 aaKnown RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms