RNA–Protein interactions for RNA: ENST00000418576.3

SEMA3B-202, Transcript of semaphorin 3B, humanhuman

TSL 2 BASIC

Gene SEMA3B, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-202ENST00000418576 ZNF253O75346 499 aa13.74□□□□□ -0.21
SEMA3B-202ENST00000418576 STAG3L2P0CL84 134 aa13.74□□□□□ -0.21
SEMA3B-202ENST00000418576 STAG3L3P0CL85 134 aa13.74□□□□□ -0.21
SEMA3B-202ENST00000418576 UBE2L3P68036 154 aaKnown RBP13.74□□□□□ -0.21
SEMA3B-202ENST00000418576 CCL20P78556 96 aa13.74□□□□□ -0.21
SEMA3B-202ENST00000418576 BLNKQ8WV28 456 aa13.74□□□□□ -0.21
SEMA3B-202ENST00000418576 FXYD5Q96DB9 178 aa13.74□□□□□ -0.21
SEMA3B-202ENST00000418576 SRD5A3Q9H8P0 318 aa13.74□□□□□ -0.21
SEMA3B-202ENST00000418576 ZNF331Q9NQX6 463 aaPredicted RBP13.74□□□□□ -0.21
SEMA3B-202ENST00000418576 CLEC5AQ9NY25 188 aa13.74□□□□□ -0.21
SEMA3B-202ENST00000418576 EIF3GO75821 320 aaKnown RBP eCLIP13.73□□□□□ -0.21
SEMA3B-202ENST00000418576 PSG9Q00887 426 aa13.73□□□□□ -0.21
SEMA3B-202ENST00000418576 BIN3Q9NQY0 253 aa13.73□□□□□ -0.21
SEMA3B-202ENST00000418576 DNAH3Q8TD57 4116 aa13.73□□□□□ -0.21
SEMA3B-202ENST00000418576 CXorf1O96002 111 aa13.73□□□□□ -0.21
SEMA3B-202ENST00000418576 ARL14EPLP0DKL9 152 aa13.73□□□□□ -0.21
SEMA3B-202ENST00000418576 PPT1P50897 306 aa13.73□□□□□ -0.21
SEMA3B-202ENST00000418576 ZNF503Q96F45 646 aa13.73□□□□□ -0.21
SEMA3B-202ENST00000418576 SMDT1Q9H4I9 107 aa13.73□□□□□ -0.21
SEMA3B-202ENST00000418576 TRAV8-2A0A0B4J237 113 aa13.72□□□□□ -0.21
SEMA3B-202ENST00000418576 HBE1P02100 147 aa13.72□□□□□ -0.21
SEMA3B-202ENST00000418576 EIF5A2Q9GZV4 153 aaKnown RBP13.72□□□□□ -0.21
SEMA3B-202ENST00000418576 FBN3Q75N90 2809 aa13.71□□□□□ -0.21
SEMA3B-202ENST00000418576 A0A1B0GV50 99 aa13.71□□□□□ -0.21
SEMA3B-202ENST00000418576 SLC17A3O00476 420 aa13.71□□□□□ -0.21
SEMA3B-202ENST00000418576 S100A12P80511 92 aa13.71□□□□□ -0.21
SEMA3B-202ENST00000418576 ZNF726P1Q15940 193 aa13.71□□□□□ -0.21
SEMA3B-202ENST00000418576 ZNF124Q15973 351 aa13.71□□□□□ -0.21
SEMA3B-202ENST00000418576 IGFL4Q6B9Z1 124 aa13.71□□□□□ -0.21
SEMA3B-202ENST00000418576 RNF182Q8N6D2 247 aa13.71□□□□□ -0.21
SEMA3B-202ENST00000418576 AAMDCQ9H7C9 122 aa13.71□□□□□ -0.21
SEMA3B-202ENST00000418576 PSG3Q16557 428 aa13.71□□□□□ -0.22
SEMA3B-202ENST00000418576 STHQ8IWL8 128 aa13.71□□□□□ -0.22
SEMA3B-202ENST00000418576 SFT2D1Q8WV19 159 aa13.71□□□□□ -0.22
SEMA3B-202ENST00000418576 MBD3L1Q8WWY6 194 aa13.71□□□□□ -0.22
SEMA3B-202ENST00000418576 NDUFB4O95168 129 aa13.7□□□□□ -0.22
SEMA3B-202ENST00000418576 FRMD6-AS1P0C7T7 363 aa13.7□□□□□ -0.22
SEMA3B-202ENST00000418576 ACTL10Q5JWF8 245 aa13.7□□□□□ -0.22
SEMA3B-202ENST00000418576 EBLN2Q6P2I7 272 aa13.7□□□□□ -0.22
SEMA3B-202ENST00000418576 FOXI2Q6ZQN5 318 aa13.7□□□□□ -0.22
SEMA3B-202ENST00000418576 SSX7Q7RTT5 188 aa13.7□□□□□ -0.22
SEMA3B-202ENST00000418576 ZNF738Q8NE65 137 aa13.7□□□□□ -0.22
SEMA3B-202ENST00000418576 C20orf173Q96LM9 149 aa13.7□□□□□ -0.22
SEMA3B-202ENST00000418576 SLC35B3Q9H1N7 401 aa13.7□□□□□ -0.22
SEMA3B-202ENST00000418576 TMEM167BQ9NRX6 74 aa13.7□□□□□ -0.22
SEMA3B-202ENST00000418576 RBFOX3A6NFN3 312 aa13.69□□□□□ -0.22
SEMA3B-202ENST00000418576 GCHFRP30047 84 aa13.69□□□□□ -0.22
SEMA3B-202ENST00000418576 LYPD1Q8N2G4 141 aa13.69□□□□□ -0.22
SEMA3B-202ENST00000418576 RARRES2Q99969 163 aa13.69□□□□□ -0.22
SEMA3B-202ENST00000418576 MEGF8Q7Z7M0 2845 aa13.69□□□□□ -0.22
SEMA3B-202ENST00000418576 LOC102724200A0A096LPH7 203 aaPredicted RBP13.68□□□□□ -0.22
SEMA3B-202ENST00000418576 MAP1LC3B2A6NCE7 125 aa13.68□□□□□ -0.22
SEMA3B-202ENST00000418576 RANP62826 216 aaKnown RBP13.68□□□□□ -0.22
SEMA3B-202ENST00000418576 RNF212Q495C1 297 aa13.68□□□□□ -0.22
SEMA3B-202ENST00000418576 ZNF506Q5JVG8 444 aa13.68□□□□□ -0.22
SEMA3B-202ENST00000418576 C15orf54Q8N8G6 183 aa13.68□□□□□ -0.22
SEMA3B-202ENST00000418576 MAP1LC3BQ9GZQ8 125 aa13.68□□□□□ -0.22
SEMA3B-202ENST00000418576 SAV1Q9H4B6 383 aaPredicted RBP13.68□□□□□ -0.22
SEMA3B-202ENST00000418576 SMCO4Q9NRQ5 59 aa13.68□□□□□ -0.22
SEMA3B-202ENST00000418576 KNCNA6PVL3 124 aa13.68□□□□□ -0.22
SEMA3B-202ENST00000418576 HLA-DMBP28068 263 aa13.68□□□□□ -0.22
SEMA3B-202ENST00000418576 CTAG1AP78358 180 aa13.67□□□□□ -0.22
SEMA3B-202ENST00000418576 ICAM4Q14773 271 aa13.67□□□□□ -0.22
SEMA3B-202ENST00000418576 EXOC3-AS1Q8N2X6 119 aa13.67□□□□□ -0.22
SEMA3B-202ENST00000418576 RPUSD4Q96CM3 377 aaKnown RBP13.67□□□□□ -0.22
SEMA3B-202ENST00000418576 RBMY1BA6NDE4 496 aaKnown RBP13.66□□□□□ -0.22
SEMA3B-202ENST00000418576 RBMY1EA6NEQ0 496 aaKnown RBP13.66□□□□□ -0.22
SEMA3B-202ENST00000418576 RBMY1DP0C7P1 496 aaKnown RBP13.66□□□□□ -0.22
SEMA3B-202ENST00000418576 HLA-DRB4P13762 266 aa13.66□□□□□ -0.22
SEMA3B-202ENST00000418576 FGF8P55075 233 aaPredicted RBP13.66□□□□□ -0.22
SEMA3B-202ENST00000418576 MRPL53Q96EL3 112 aaKnown RBP13.66□□□□□ -0.22
SEMA3B-202ENST00000418576 Q9H3A6 140 aa13.66□□□□□ -0.22
SEMA3B-202ENST00000418576 HLA-DRB4X5D2U9 266 aa13.66□□□□□ -0.22
SEMA3B-202ENST00000418576 LOC102723971A0A1B0GUV8 181 aa13.66□□□□□ -0.22
SEMA3B-202ENST00000418576 RPL35AP18077 110 aaKnown RBP13.66□□□□□ -0.22
SEMA3B-202ENST00000418576 APOC4P55056 127 aa13.66□□□□□ -0.22
SEMA3B-202ENST00000418576 HAGHQ16775 308 aa13.66□□□□□ -0.22
SEMA3B-202ENST00000418576 TMEM88Q6PEY1 159 aa13.66□□□□□ -0.22
SEMA3B-202ENST00000418576 LINC00322Q6ZN03 302 aaPredicted RBP13.66□□□□□ -0.22
SEMA3B-202ENST00000418576 CBLN2Q8IUK8 224 aa13.66□□□□□ -0.22
SEMA3B-202ENST00000418576 A0A0J9YX75 114 aa13.65□□□□□ -0.22
SEMA3B-202ENST00000418576 ZNF705FA8MVS1 300 aaPredicted RBP13.65□□□□□ -0.22
SEMA3B-202ENST00000418576 F6UB75 175 aa13.65□□□□□ -0.22
SEMA3B-202ENST00000418576 H3BMM0 161 aa13.65□□□□□ -0.22
SEMA3B-202ENST00000418576 SRP19P09132 144 aaKnown RBP13.65□□□□□ -0.22
SEMA3B-202ENST00000418576 PMS2P11Q13670 270 aa13.65□□□□□ -0.22
SEMA3B-202ENST00000418576 GDF5OSQ5U4N7 250 aa13.65□□□□□ -0.22
SEMA3B-202ENST00000418576 TRPT1Q86TN4 253 aaKnown RBP13.65□□□□□ -0.22
SEMA3B-202ENST00000418576 KIR2DL5BA0A0G2JN68 375 aa13.64□□□□□ -0.23
SEMA3B-202ENST00000418576 KIR2DL5BA0A0G2JPC4 375 aa13.64□□□□□ -0.23
SEMA3B-202ENST00000418576 DUSP14O95147 198 aaKnown RBP13.64□□□□□ -0.23
SEMA3B-202ENST00000418576 CSN1S1P47710 185 aa13.64□□□□□ -0.23
SEMA3B-202ENST00000418576 DEFB1P60022 68 aa13.64□□□□□ -0.23
SEMA3B-202ENST00000418576 NUTF2P61970 127 aaKnown RBP13.64□□□□□ -0.23
SEMA3B-202ENST00000418576 KIR2DL5AQ8N109 375 aa13.64□□□□□ -0.23
SEMA3B-202ENST00000418576 OR4B1Q8NGF8 309 aa13.64□□□□□ -0.23
SEMA3B-202ENST00000418576 KIR2DL5BQ8NHK3 375 aa13.64□□□□□ -0.23
SEMA3B-202ENST00000418576 OTORQ9NRC9 128 aa13.64□□□□□ -0.23
SEMA3B-202ENST00000418576 M0R3E3 92 aa13.63□□□□□ -0.23
SEMA3B-202ENST00000418576 RAB5BP61020 215 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 157.7 ms