RNA–Protein interactions for RNA: ENST00000418188.1

CSPG4P3Y-201, Transcript of CSPG4 pseudogene 3 Y-linked, humanhuman

BASIC

Gene CSPG4P3Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P3Y-201ENST00000418188 OR8A1Q8NGG7 326 aa9.18□□□□□ -0.94
CSPG4P3Y-201ENST00000418188 PRELID3AQ96N28 172 aa9.18□□□□□ -0.94
CSPG4P3Y-201ENST00000418188 CRXO43186 299 aaPredicted RBP9.17□□□□□ -0.94
CSPG4P3Y-201ENST00000418188 GPR183P32249 361 aa9.17□□□□□ -0.94
CSPG4P3Y-201ENST00000418188 RPS20P60866 119 aaKnown RBP9.17□□□□□ -0.94
CSPG4P3Y-201ENST00000418188 MSRB2Q9Y3D2 182 aa9.17□□□□□ -0.94
CSPG4P3Y-201ENST00000418188 D6R8Y8 96 aa9.17□□□□□ -0.94
CSPG4P3Y-201ENST00000418188 CKS2P33552 79 aa9.17□□□□□ -0.94
CSPG4P3Y-201ENST00000418188 NDPQ00604 133 aa9.17□□□□□ -0.94
CSPG4P3Y-201ENST00000418188 C1orf122Q6ZSJ8 110 aa9.17□□□□□ -0.94
CSPG4P3Y-201ENST00000418188 BCL6BQ8N143 479 aaPredicted RBP9.17□□□□□ -0.94
CSPG4P3Y-201ENST00000418188 ZNF48Q96MX3 618 aaPredicted RBP9.17□□□□□ -0.94
CSPG4P3Y-201ENST00000418188 AKAP6Q13023 2319 aa9.17□□□□□ -0.94
CSPG4P3Y-201ENST00000418188 GOSR1O95249 250 aa9.17□□□□□ -0.94
CSPG4P3Y-201ENST00000418188 ADORA2A-AS1P86434 159 aa9.17□□□□□ -0.94
CSPG4P3Y-201ENST00000418188 Q8TAT8 98 aa9.17□□□□□ -0.94
CSPG4P3Y-201ENST00000418188 CRIP1P50238 77 aa9.16□□□□□ -0.94
CSPG4P3Y-201ENST00000418188 NHLH1Q02575 133 aa9.16□□□□□ -0.94
CSPG4P3Y-201ENST00000418188 VAMP3Q15836 100 aa9.16□□□□□ -0.94
CSPG4P3Y-201ENST00000418188 UBTD1Q9HAC8 227 aa9.16□□□□□ -0.94
CSPG4P3Y-201ENST00000418188 NUDT3O95989 172 aa9.16□□□□□ -0.94
CSPG4P3Y-201ENST00000418188 C15orf32Q32M92 178 aa9.16□□□□□ -0.94
CSPG4P3Y-201ENST00000418188 FAM120AOSQ5T036 256 aa9.16□□□□□ -0.94
CSPG4P3Y-201ENST00000418188 IGFL4Q6B9Z1 124 aa9.16□□□□□ -0.94
CSPG4P3Y-201ENST00000418188 C12orf54Q6X4T0 127 aa9.16□□□□□ -0.94
CSPG4P3Y-201ENST00000418188 AMN1Q8IY45 258 aa9.16□□□□□ -0.94
CSPG4P3Y-201ENST00000418188 FER1L6-AS1Q8NA97 138 aa9.16□□□□□ -0.94
CSPG4P3Y-201ENST00000418188 PRR25Q96S07 402 aa9.16□□□□□ -0.94
CSPG4P3Y-201ENST00000418188 TMEM213A2RRL7 107 aa9.16□□□□□ -0.94
CSPG4P3Y-201ENST00000418188 IFI27P40305 119 aaPredicted RBP9.16□□□□□ -0.94
CSPG4P3Y-201ENST00000418188 RAB9AP51151 201 aa9.16□□□□□ -0.94
CSPG4P3Y-201ENST00000418188 SPATA12Q7Z6I5 190 aa9.16□□□□□ -0.94
CSPG4P3Y-201ENST00000418188 MRPS12O15235 138 aaKnown RBP9.15□□□□□ -0.94
CSPG4P3Y-201ENST00000418188 CDSNQ15517 529 aa9.15□□□□□ -0.94
CSPG4P3Y-201ENST00000418188 ORAOV1Q8WV07 137 aa9.15□□□□□ -0.94
CSPG4P3Y-201ENST00000418188 CTSGP08311 255 aa9.15□□□□□ -0.94
CSPG4P3Y-201ENST00000418188 C16orf54Q6UWD8 224 aa9.15□□□□□ -0.94
CSPG4P3Y-201ENST00000418188 MS4A6AQ9H2W1 248 aa9.15□□□□□ -0.94
CSPG4P3Y-201ENST00000418188 CLEC3BP05452 202 aa9.15□□□□□ -0.95
CSPG4P3Y-201ENST00000418188 RHOGP84095 191 aa9.15□□□□□ -0.95
CSPG4P3Y-201ENST00000418188 MPV17L2Q567V2 206 aa9.15□□□□□ -0.95
CSPG4P3Y-201ENST00000418188 FAM104BQ5XKR9 115 aa9.15□□□□□ -0.95
CSPG4P3Y-201ENST00000418188 DYNAPQ8N1N2 210 aa9.15□□□□□ -0.95
CSPG4P3Y-201ENST00000418188 IGHV7-81A0A0B4J1V7 117 aa9.14□□□□□ -0.95
CSPG4P3Y-201ENST00000418188 COX11Q9Y6N1 276 aa9.14□□□□□ -0.95
CSPG4P3Y-201ENST00000418188 LRBAP50851 2863 aa9.14□□□□□ -0.95
CSPG4P3Y-201ENST00000418188 ZZEF1O43149 2961 aa9.14□□□□□ -0.95
CSPG4P3Y-201ENST00000418188 FABP5P3A8MUU1 101 aa9.14□□□□□ -0.95
CSPG4P3Y-201ENST00000418188 ZNF747Q9BV97 191 aa9.14□□□□□ -0.95
CSPG4P3Y-201ENST00000418188 C11orf71Q6IPW1 123 aa9.13□□□□□ -0.95
CSPG4P3Y-201ENST00000418188 VGLL1Q99990 258 aa9.13□□□□□ -0.95
CSPG4P3Y-201ENST00000418188 SPTAN1Q13813 2472 aaKnown RBP9.13□□□□□ -0.95
CSPG4P3Y-201ENST00000418188 IGHV3OR16-13A0A075B7E8 117 aa9.13□□□□□ -0.95
CSPG4P3Y-201ENST00000418188 IGHV3-74A0A0B4J1X5 117 aa9.13□□□□□ -0.95
CSPG4P3Y-201ENST00000418188 IGHV3-66A0A0C4DH42 116 aa9.13□□□□□ -0.95
CSPG4P3Y-201ENST00000418188 ZFP36P26651 326 aaKnown RBP9.13□□□□□ -0.95
CSPG4P3Y-201ENST00000418188 SMIM15Q7Z3B0 74 aa9.13□□□□□ -0.95
CSPG4P3Y-201ENST00000418188 NDUFS7O75251 213 aa9.13□□□□□ -0.95
CSPG4P3Y-201ENST00000418188 EGR2P11161 476 aaPredicted RBP9.13□□□□□ -0.95
CSPG4P3Y-201ENST00000418188 FBLN7Q53RD9 439 aa9.13□□□□□ -0.95
CSPG4P3Y-201ENST00000418188 CLEC19AQ6UXS0 136 aa9.13□□□□□ -0.95
CSPG4P3Y-201ENST00000418188 ZNF493Q6ZR52 646 aa9.13□□□□□ -0.95
CSPG4P3Y-201ENST00000418188 ARL6IP6Q8N6S5 226 aa9.13□□□□□ -0.95
CSPG4P3Y-201ENST00000418188 OR4C5Q8NGB2 326 aa9.13□□□□□ -0.95
CSPG4P3Y-201ENST00000418188 SIGLEC8Q9NYZ4 499 aa9.13□□□□□ -0.95
CSPG4P3Y-201ENST00000418188 F8W735 103 aaPredicted RBP9.12□□□□□ -0.95
CSPG4P3Y-201ENST00000418188 HLA-DMBP28068 263 aa9.12□□□□□ -0.95
CSPG4P3Y-201ENST00000418188 UBE2E1P51965 193 aa9.12□□□□□ -0.95
CSPG4P3Y-201ENST00000418188 LINC01545Q5VT33 79 aa9.12□□□□□ -0.95
CSPG4P3Y-201ENST00000418188 Q6ZVH6 145 aa9.12□□□□□ -0.95
CSPG4P3Y-201ENST00000418188 Q8N9W7 124 aa9.12□□□□□ -0.95
CSPG4P3Y-201ENST00000418188 FAM110DQ8TAY7 271 aaPredicted RBP9.12□□□□□ -0.95
CSPG4P3Y-201ENST00000418188 METTL26Q96S19 204 aa9.12□□□□□ -0.95
CSPG4P3Y-201ENST00000418188 HBDP02042 147 aa9.11□□□□□ -0.95
CSPG4P3Y-201ENST00000418188 SAA4P35542 130 aa9.11□□□□□ -0.95
CSPG4P3Y-201ENST00000418188 MRPL51Q4U2R6 128 aaKnown RBP9.11□□□□□ -0.95
CSPG4P3Y-201ENST00000418188 Q8N6K4 173 aa9.11□□□□□ -0.95
CSPG4P3Y-201ENST00000418188 ATP6V0E1O15342 81 aa9.11□□□□□ -0.95
CSPG4P3Y-201ENST00000418188 EBI3Q14213 229 aa9.11□□□□□ -0.95
CSPG4P3Y-201ENST00000418188 DTX2Q86UW9 622 aa9.11□□□□□ -0.95
CSPG4P3Y-201ENST00000418188 EEF1AKMT3Q96AZ1 226 aa9.11□□□□□ -0.95
CSPG4P3Y-201ENST00000418188 MAP1LC3AQ9H492 121 aa9.11□□□□□ -0.95
CSPG4P3Y-201ENST00000418188 IGHV3-49A0A0A0MS15 119 aa9.11□□□□□ -0.95
CSPG4P3Y-201ENST00000418188 SNAI2O43623 268 aa9.11□□□□□ -0.95
CSPG4P3Y-201ENST00000418188 TMEM78Q5T7P6 136 aa9.11□□□□□ -0.95
CSPG4P3Y-201ENST00000418188 SLC50A1Q9BRV3 221 aa9.11□□□□□ -0.95
CSPG4P3Y-201ENST00000418188 IGHV2-70DA0A0C4DH43 119 aa9.1□□□□□ -0.95
CSPG4P3Y-201ENST00000418188 NCR2O95944 276 aa9.1□□□□□ -0.95
CSPG4P3Y-201ENST00000418188 EFNA4P52798 201 aa9.1□□□□□ -0.95
CSPG4P3Y-201ENST00000418188 HIST1H1AQ02539 215 aaPredicted RBP9.1□□□□□ -0.95
CSPG4P3Y-201ENST00000418188 GATD1Q8NB37 220 aa9.1□□□□□ -0.95
CSPG4P3Y-201ENST00000418188 TP73-AS1Q9UF72 201 aa9.1□□□□□ -0.95
CSPG4P3Y-201ENST00000418188 CBY1Q9Y3M2 126 aa9.1□□□□□ -0.95
CSPG4P3Y-201ENST00000418188 SMKR1H3BMG3 65 aa9.1□□□□□ -0.95
CSPG4P3Y-201ENST00000418188 FXYD7P58549 80 aa9.1□□□□□ -0.95
CSPG4P3Y-201ENST00000418188 ERCC8Q13216 396 aa9.1□□□□□ -0.95
CSPG4P3Y-201ENST00000418188 UBE2V1Q13404 147 aa9.1□□□□□ -0.95
CSPG4P3Y-201ENST00000418188 AP1S3Q96PC3 154 aa9.1□□□□□ -0.95
CSPG4P3Y-201ENST00000418188 CBY3A6NI87 242 aa9.1□□□□□ -0.95
CSPG4P3Y-201ENST00000418188 ZNF207O43670 478 aaKnown RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms