RNA–Protein interactions for RNA: ENST00000417508.1

VPS16-204, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-204ENST00000417508 RTL8CO15255 209 aa12.98□□□□□ -0.33
VPS16-204ENST00000417508 MPDU1O75352 247 aa12.98□□□□□ -0.33
VPS16-204ENST00000417508 HTN1P15515 57 aa12.98□□□□□ -0.33
VPS16-204ENST00000417508 S100A10P60903 97 aa12.98□□□□□ -0.33
VPS16-204ENST00000417508 RAB32Q13637 225 aa12.98□□□□□ -0.33
VPS16-204ENST00000417508 SOHLH1Q5JUK2 328 aa12.98□□□□□ -0.33
VPS16-204ENST00000417508 MORN5Q5VZ52 161 aa12.98□□□□□ -0.33
VPS16-204ENST00000417508 TMEM263Q8WUH6 116 aaKnown RBP12.98□□□□□ -0.33
VPS16-204ENST00000417508 ODF3Q96PU9 254 aa12.98□□□□□ -0.33
VPS16-204ENST00000417508 SLC39A9Q9NUM3 307 aa12.98□□□□□ -0.33
VPS16-204ENST00000417508 A0A1B0GVY2 172 aa12.97□□□□□ -0.33
VPS16-204ENST00000417508 F5H768 121 aa12.97□□□□□ -0.33
VPS16-204ENST00000417508 SLC17A3O00476 420 aa12.97□□□□□ -0.33
VPS16-204ENST00000417508 SNRPCP09234 159 aaKnown RBP12.97□□□□□ -0.33
VPS16-204ENST00000417508 BAXQ07812 192 aa12.97□□□□□ -0.33
VPS16-204ENST00000417508 ASAH1Q13510 395 aa12.97□□□□□ -0.33
VPS16-204ENST00000417508 FCN2Q15485 313 aa12.97□□□□□ -0.33
VPS16-204ENST00000417508 CCDC28AQ8IWP9 274 aa12.97□□□□□ -0.33
VPS16-204ENST00000417508 IGSF23A1L1A6 192 aa12.96□□□□□ -0.33
VPS16-204ENST00000417508 LEPP41159 167 aa12.96□□□□□ -0.33
VPS16-204ENST00000417508 RNASE8Q8TDE3 154 aaKnown RBP12.96□□□□□ -0.33
VPS16-204ENST00000417508 MRPL53Q96EL3 112 aaKnown RBP12.96□□□□□ -0.33
VPS16-204ENST00000417508 ATG101Q9BSB4 218 aa12.96□□□□□ -0.33
VPS16-204ENST00000417508 GPN1Q9HCN4 374 aaPredicted RBP12.96□□□□□ -0.33
VPS16-204ENST00000417508 TMEM14CQ9P0S9 112 aa12.96□□□□□ -0.33
VPS16-204ENST00000417508 HECTD4Q9Y4D8 3996 aa12.95□□□□□ -0.34
VPS16-204ENST00000417508 IGLV2-18A0A075B6J9 118 aa12.95□□□□□ -0.34
VPS16-204ENST00000417508 TRAV5A0A0B4J249 113 aa12.95□□□□□ -0.34
VPS16-204ENST00000417508 PRAC2D3DTV9 90 aa12.95□□□□□ -0.34
VPS16-204ENST00000417508 H3BTX0 84 aa12.95□□□□□ -0.34
VPS16-204ENST00000417508 RLN2P04090 185 aa12.95□□□□□ -0.34
VPS16-204ENST00000417508 NOP10Q9NPE3 64 aaKnown RBP12.95□□□□□ -0.34
VPS16-204ENST00000417508 ZNF586Q9NXT0 402 aa12.95□□□□□ -0.34
VPS16-204ENST00000417508 PRELID1Q9Y255 219 aa12.95□□□□□ -0.34
VPS16-204ENST00000417508 UBE2L5PA0A1B0GUS4 154 aa12.94□□□□□ -0.34
VPS16-204ENST00000417508 NPIPB6E9PJ23 425 aa12.94□□□□□ -0.34
VPS16-204ENST00000417508 HIST1H1EP10412 219 aaKnown RBP12.94□□□□□ -0.34
VPS16-204ENST00000417508 PDE6HQ13956 83 aa12.94□□□□□ -0.34
VPS16-204ENST00000417508 TRBV19A0A075B6N1 114 aa12.93□□□□□ -0.34
VPS16-204ENST00000417508 FGF7P21781 194 aa12.93□□□□□ -0.34
VPS16-204ENST00000417508 CCL18P55774 89 aa12.93□□□□□ -0.34
VPS16-204ENST00000417508 C1orf134Q5TEV5 83 aa12.93□□□□□ -0.34
VPS16-204ENST00000417508 GFI1BQ5VTD9 330 aa12.93□□□□□ -0.34
VPS16-204ENST00000417508 SLC25A31Q9H0C2 315 aa12.93□□□□□ -0.34
VPS16-204ENST00000417508 NUDT3O95989 172 aa12.92□□□□□ -0.34
VPS16-204ENST00000417508 CT45A10P0DMU9 189 aa12.92□□□□□ -0.34
VPS16-204ENST00000417508 PRB4P10163 310 aaPredicted RBP12.92□□□□□ -0.34
VPS16-204ENST00000417508 CYCSP99999 105 aaKnown RBP12.92□□□□□ -0.34
VPS16-204ENST00000417508 KIR3DS1Q14943 382 aa12.92□□□□□ -0.34
VPS16-204ENST00000417508 LINC00612Q8N6U2 182 aa12.92□□□□□ -0.34
VPS16-204ENST00000417508 ENKURQ8TC29 256 aa12.92□□□□□ -0.34
VPS16-204ENST00000417508 LINC00477Q96M19 166 aa12.92□□□□□ -0.34
VPS16-204ENST00000417508 PYGO2Q9BRQ0 406 aa12.92□□□□□ -0.34
VPS16-204ENST00000417508 TIMM9Q9Y5J7 89 aa12.92□□□□□ -0.34
VPS16-204ENST00000417508 E5RGE8 158 aa12.91□□□□□ -0.34
VPS16-204ENST00000417508 SLC25A5P05141 298 aaKnown RBP12.91□□□□□ -0.34
VPS16-204ENST00000417508 NPCDR1Q9BY65 106 aa12.91□□□□□ -0.34
VPS16-204ENST00000417508 PARD6GQ9BYG4 376 aaPredicted RBP12.91□□□□□ -0.34
VPS16-204ENST00000417508 NMES1Q9C002 83 aa12.91□□□□□ -0.34
VPS16-204ENST00000417508 SNURFLB1AK76 121 aa12.9□□□□□ -0.34
VPS16-204ENST00000417508 PRAF2O60831 178 aa12.9□□□□□ -0.34
VPS16-204ENST00000417508 NHLH2Q02577 135 aa12.9□□□□□ -0.34
VPS16-204ENST00000417508 ZNF503Q96F45 646 aa12.9□□□□□ -0.34
VPS16-204ENST00000417508 TRAV12-3A0A0B4J271 114 aa12.89□□□□□ -0.35
VPS16-204ENST00000417508 UPK1BO75841 260 aa12.89□□□□□ -0.35
VPS16-204ENST00000417508 NDUFB4O95168 129 aa12.89□□□□□ -0.35
VPS16-204ENST00000417508 MED14OSP0DP75 135 aa12.89□□□□□ -0.35
VPS16-204ENST00000417508 DAZ2Q13117 558 aaKnown RBP12.89□□□□□ -0.35
VPS16-204ENST00000417508 OR5C1Q8NGR4 320 aa12.89□□□□□ -0.35
VPS16-204ENST00000417508 AAMDCQ9H7C9 122 aa12.89□□□□□ -0.35
VPS16-204ENST00000417508 KCNIP2Q9NS61 270 aa12.89□□□□□ -0.35
VPS16-204ENST00000417508 DNAH17Q9UFH2 4485 aa12.88□□□□□ -0.35
VPS16-204ENST00000417508 NMBP08949 121 aa12.88□□□□□ -0.35
VPS16-204ENST00000417508 CLINT1Q14677 625 aa12.88□□□□□ -0.35
VPS16-204ENST00000417508 ZNRF2Q8NHG8 242 aa12.88□□□□□ -0.35
VPS16-204ENST00000417508 RNF141Q8WVD5 230 aa12.88□□□□□ -0.35
VPS16-204ENST00000417508 LINC00467Q9BRT7 94 aa12.88□□□□□ -0.35
VPS16-204ENST00000417508 NBDYA0A0U1RRE5 68 aa12.87□□□□□ -0.35
VPS16-204ENST00000417508 C7orf71A4D174 169 aa12.87□□□□□ -0.35
VPS16-204ENST00000417508 H3BNG1 76 aa12.87□□□□□ -0.35
VPS16-204ENST00000417508 J3KRW8 73 aa12.87□□□□□ -0.35
VPS16-204ENST00000417508 M0R3E3 92 aa12.87□□□□□ -0.35
VPS16-204ENST00000417508 M6PRP20645 277 aa12.87□□□□□ -0.35
VPS16-204ENST00000417508 OR5I1Q13606 314 aa12.87□□□□□ -0.35
VPS16-204ENST00000417508 C9orf47Q6ZRZ4 202 aa12.87□□□□□ -0.35
VPS16-204ENST00000417508 RXFP4Q8TDU9 374 aa12.87□□□□□ -0.35
VPS16-204ENST00000417508 GNPNAT1Q96EK6 184 aaPredicted RBP12.87□□□□□ -0.35
VPS16-204ENST00000417508 AGPAT4-IT1Q9H0P7 198 aa12.87□□□□□ -0.35
VPS16-204ENST00000417508 HERC2O95714 4834 aa12.87□□□□□ -0.35
VPS16-204ENST00000417508 KLLNB2CW77 178 aa12.86□□□□□ -0.35
VPS16-204ENST00000417508 INMT-MINDY4F8WBC2 141 aa12.86□□□□□ -0.35
VPS16-204ENST00000417508 SIX6O95475 246 aa12.86□□□□□ -0.35
VPS16-204ENST00000417508 NBEAP1P0C6P0 100 aa12.86□□□□□ -0.35
VPS16-204ENST00000417508 PYYP10082 97 aa12.86□□□□□ -0.35
VPS16-204ENST00000417508 ZNF680Q8NEM1 530 aa12.86□□□□□ -0.35
VPS16-204ENST00000417508 THAP6Q8TBB0 222 aa12.86□□□□□ -0.35
VPS16-204ENST00000417508 BLNKQ8WV28 456 aa12.86□□□□□ -0.35
VPS16-204ENST00000417508 FAM19A4Q96LR4 140 aa12.86□□□□□ -0.35
VPS16-204ENST00000417508 SLC25A2Q9BXI2 301 aa12.86□□□□□ -0.35
VPS16-204ENST00000417508 MRPL32Q9BYC8 188 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms