RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 MYOZ3Q8TDC0 251 aa11.27□□□□□ -0.61
SGCE-202ENST00000415788 MRPL27Q9P0M9 148 aaKnown RBP11.27□□□□□ -0.61
SGCE-202ENST00000415788 MRPS16Q9Y3D3 137 aaKnown RBP11.27□□□□□ -0.61
SGCE-202ENST00000415788 IGLV11-55A0A075B6I3 123 aa11.26□□□□□ -0.61
SGCE-202ENST00000415788 A0A0G2JLM5 398 aa11.26□□□□□ -0.61
SGCE-202ENST00000415788 CORTO00230 105 aa11.26□□□□□ -0.61
SGCE-202ENST00000415788 HYPMO75409 117 aa11.26□□□□□ -0.61
SGCE-202ENST00000415788 CD28P10747 220 aa11.26□□□□□ -0.61
SGCE-202ENST00000415788 CENPWQ5EE01 88 aa11.26□□□□□ -0.61
SGCE-202ENST00000415788 TCTEX1D4Q5JR98 221 aa11.26□□□□□ -0.61
SGCE-202ENST00000415788 Q6ZN92 141 aa11.26□□□□□ -0.61
SGCE-202ENST00000415788 USMG5Q96IX5 58 aa11.26□□□□□ -0.61
SGCE-202ENST00000415788 CITED1Q99966 193 aa11.26□□□□□ -0.61
SGCE-202ENST00000415788 KLK15Q9H2R5 256 aa11.26□□□□□ -0.61
SGCE-202ENST00000415788 ATRQ13535 2644 aa11.26□□□□□ -0.61
SGCE-202ENST00000415788 TCRBV4S1A1TA0A5B7 111 aa11.25□□□□□ -0.61
SGCE-202ENST00000415788 TFPI2P48307 235 aa11.25□□□□□ -0.61
SGCE-202ENST00000415788 ANKRD39Q53RE8 183 aa11.25□□□□□ -0.61
SGCE-202ENST00000415788 C2orf83Q53S99 150 aa11.25□□□□□ -0.61
SGCE-202ENST00000415788 ARL6IP6Q8N6S5 226 aa11.25□□□□□ -0.61
SGCE-202ENST00000415788 OR2D3Q8NGH3 330 aa11.25□□□□□ -0.61
SGCE-202ENST00000415788 BORCS7Q96B45 105 aa11.25□□□□□ -0.61
SGCE-202ENST00000415788 UBE2E2Q96LR5 201 aa11.25□□□□□ -0.61
SGCE-202ENST00000415788 FANCD2OSQ96PS1 177 aa11.25□□□□□ -0.61
SGCE-202ENST00000415788 MDFIQ99750 246 aa11.25□□□□□ -0.61
SGCE-202ENST00000415788 TSSC4Q9Y5U2 329 aaPredicted RBP11.25□□□□□ -0.61
SGCE-202ENST00000415788 RNASE2P10153 161 aaKnown RBP11.25□□□□□ -0.61
SGCE-202ENST00000415788 NPY1RP25929 384 aa11.25□□□□□ -0.61
SGCE-202ENST00000415788 KRTAP10-3P60369 221 aa11.25□□□□□ -0.61
SGCE-202ENST00000415788 RHOGP84095 191 aa11.25□□□□□ -0.61
SGCE-202ENST00000415788 PRR20EP86478 221 aa11.25□□□□□ -0.61
SGCE-202ENST00000415788 PRR20CP86479 221 aa11.25□□□□□ -0.61
SGCE-202ENST00000415788 PRR20DP86480 221 aa11.25□□□□□ -0.61
SGCE-202ENST00000415788 PRR20BP86481 221 aa11.25□□□□□ -0.61
SGCE-202ENST00000415788 PRR20AP86496 221 aa11.25□□□□□ -0.61
SGCE-202ENST00000415788 PVRIGQ6DKI7 326 aa11.25□□□□□ -0.61
SGCE-202ENST00000415788 SHISA2Q6UWI4 295 aa11.25□□□□□ -0.61
SGCE-202ENST00000415788 SEPSECSQ9HD40 501 aaKnown RBP11.25□□□□□ -0.61
SGCE-202ENST00000415788 SMIM27A0A1W2PRY6 76 aa11.24□□□□□ -0.61
SGCE-202ENST00000415788 NDUFB8O95169 186 aa11.24□□□□□ -0.61
SGCE-202ENST00000415788 TOMM40O96008 361 aa11.24□□□□□ -0.61
SGCE-202ENST00000415788 C3orf79P0CE67 100 aa11.24□□□□□ -0.61
SGCE-202ENST00000415788 KHDC1LQ5JSQ8 128 aa11.24□□□□□ -0.61
SGCE-202ENST00000415788 PQLC2Q6ZP29 291 aa11.24□□□□□ -0.61
SGCE-202ENST00000415788 NIT1Q86X76 327 aa11.24□□□□□ -0.61
SGCE-202ENST00000415788 NDUFA11Q86Y39 141 aa11.24□□□□□ -0.61
SGCE-202ENST00000415788 STPG4Q8N801 248 aa11.24□□□□□ -0.61
SGCE-202ENST00000415788 ZNF491Q8N8L2 437 aa11.24□□□□□ -0.61
SGCE-202ENST00000415788 C11orf44Q8N8P7 122 aa11.24□□□□□ -0.61
SGCE-202ENST00000415788 CITED2Q99967 270 aaPredicted RBP11.24□□□□□ -0.61
SGCE-202ENST00000415788 TECRQ9NZ01 308 aaKnown RBP11.24□□□□□ -0.61
SGCE-202ENST00000415788 TET2Q6N021 2002 aaPredicted RBP11.24□□□□□ -0.61
SGCE-202ENST00000415788 IZUMO1RA6ND01 250 aa11.23□□□□□ -0.61
SGCE-202ENST00000415788 OR2J3O76001 311 aa11.23□□□□□ -0.61
SGCE-202ENST00000415788 PMCHP20382 165 aa11.23□□□□□ -0.61
SGCE-202ENST00000415788 SRIP30626 198 aa11.23□□□□□ -0.61
SGCE-202ENST00000415788 SPATA31B1PQ5VZV4 182 aa11.23□□□□□ -0.61
SGCE-202ENST00000415788 LEMD1Q68G75 181 aa11.23□□□□□ -0.61
SGCE-202ENST00000415788 BMPR1BO00238 502 aa11.23□□□□□ -0.61
SGCE-202ENST00000415788 APCSP02743 223 aa11.23□□□□□ -0.61
SGCE-202ENST00000415788 PTTG1IPP53801 180 aa11.23□□□□□ -0.61
SGCE-202ENST00000415788 MFAP2P55001 183 aa11.23□□□□□ -0.61
SGCE-202ENST00000415788 TAS2R45P59539 299 aa11.23□□□□□ -0.61
SGCE-202ENST00000415788 ATP5G2Q06055 141 aa11.23□□□□□ -0.61
SGCE-202ENST00000415788 C15orf32Q32M92 178 aa11.23□□□□□ -0.61
SGCE-202ENST00000415788 LCNL1Q6ZST4 164 aa11.23□□□□□ -0.61
SGCE-202ENST00000415788 TSKUQ8WUA8 353 aa11.23□□□□□ -0.61
SGCE-202ENST00000415788 A0A1W2PRE2 83 aa11.22□□□□□ -0.61
SGCE-202ENST00000415788 FRMD6-AS1P0C7T7 363 aa11.22□□□□□ -0.61
SGCE-202ENST00000415788 CRYBB3P26998 211 aa11.22□□□□□ -0.61
SGCE-202ENST00000415788 IBA57Q5T440 356 aaKnown RBP11.22□□□□□ -0.61
SGCE-202ENST00000415788 ZNF738Q8NE65 137 aa11.22□□□□□ -0.61
SGCE-202ENST00000415788 C4orf3Q8WVX3 66 aa11.22□□□□□ -0.61
SGCE-202ENST00000415788 RCHY1Q96PM5 261 aa11.22□□□□□ -0.61
SGCE-202ENST00000415788 ZNF331Q9NQX6 463 aaPredicted RBP11.22□□□□□ -0.61
SGCE-202ENST00000415788 K7EP13 123 aa11.21□□□□□ -0.61
SGCE-202ENST00000415788 LINC00869P0C866 280 aa11.21□□□□□ -0.61
SGCE-202ENST00000415788 TSPOP30536 169 aa11.21□□□□□ -0.61
SGCE-202ENST00000415788 UBE2V1Q13404 147 aa11.21□□□□□ -0.61
SGCE-202ENST00000415788 EEF1AKMT3Q96AZ1 226 aa11.21□□□□□ -0.61
SGCE-202ENST00000415788 TRBV7-1A0A0A6YYK4 115 aa11.21□□□□□ -0.62
SGCE-202ENST00000415788 MIR17HGQ75NE6 70 aa11.21□□□□□ -0.62
SGCE-202ENST00000415788 ATP6V0BQ99437 205 aa11.21□□□□□ -0.62
SGCE-202ENST00000415788 CHRDL1Q9BU40 450 aa11.21□□□□□ -0.62
SGCE-202ENST00000415788 COX11Q9Y6N1 276 aa11.21□□□□□ -0.62
SGCE-202ENST00000415788 I3L2K1 104 aa11.2□□□□□ -0.62
SGCE-202ENST00000415788 K7EIM0 57 aa11.2□□□□□ -0.62
SGCE-202ENST00000415788 LGALS1P09382 135 aaKnown RBP11.2□□□□□ -0.62
SGCE-202ENST00000415788 KLF5Q13887 457 aaPredicted RBP11.2□□□□□ -0.62
SGCE-202ENST00000415788 C21orf62-AS1Q17RA5 79 aa11.2□□□□□ -0.62
SGCE-202ENST00000415788 KIAA1644Q3SXP7 199 aa11.2□□□□□ -0.62
SGCE-202ENST00000415788 SAPCD1Q5SSQ6 148 aa11.2□□□□□ -0.62
SGCE-202ENST00000415788 FAM162BQ5T6X4 162 aa11.2□□□□□ -0.62
SGCE-202ENST00000415788 ETFRF1Q6IPR1 90 aa11.2□□□□□ -0.62
SGCE-202ENST00000415788 KLHL30-AS1Q8NEE0 82 aa11.2□□□□□ -0.62
SGCE-202ENST00000415788 IGF2BP2-AS1Q96M15 143 aa11.2□□□□□ -0.62
SGCE-202ENST00000415788 RNASE7Q9H1E1 156 aaKnown RBP11.2□□□□□ -0.62
SGCE-202ENST00000415788 TRAV9-2A0A087WT02 112 aa11.19□□□□□ -0.62
SGCE-202ENST00000415788 IGLV2-8P01709 118 aa11.19□□□□□ -0.62
SGCE-202ENST00000415788 FAM231DQ6ZW35 169 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms