RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 FGF6P10767 208 aa7.68□□□□□ -1.18
CD44-206ENST00000415148 IFI27P40305 119 aaPredicted RBP7.68□□□□□ -1.18
CD44-206ENST00000415148 COTL1Q14019 142 aa7.68□□□□□ -1.18
CD44-206ENST00000415148 FAM104BQ5XKR9 115 aa7.68□□□□□ -1.18
CD44-206ENST00000415148 OR1N2Q8NGR9 330 aa7.68□□□□□ -1.18
CD44-206ENST00000415148 C8orf49Q96NF6 230 aa7.68□□□□□ -1.18
CD44-206ENST00000415148 VPS25Q9BRG1 176 aa7.68□□□□□ -1.18
CD44-206ENST00000415148 ZGRF1Q86YA3 2104 aa7.68□□□□□ -1.18
CD44-206ENST00000415148 M0R1W7 72 aa7.68□□□□□ -1.18
CD44-206ENST00000415148 M0R3E3 92 aa7.68□□□□□ -1.18
CD44-206ENST00000415148 PPBPP02775 128 aa7.68□□□□□ -1.18
CD44-206ENST00000415148 NBL1P41271 181 aa7.68□□□□□ -1.18
CD44-206ENST00000415148 SRSF2Q01130 221 aaKnown RBP7.68□□□□□ -1.18
CD44-206ENST00000415148 ONECUT1Q9UBC0 465 aa7.68□□□□□ -1.18
CD44-206ENST00000415148 HILPDAQ9Y5L2 63 aa7.68□□□□□ -1.18
CD44-206ENST00000415148 ARHGAP32A7KAX9 2087 aa7.68□□□□□ -1.18
CD44-206ENST00000415148 GVINP1Q7Z2Y8 2422 aa7.67□□□□□ -1.18
CD44-206ENST00000415148 IGLV11-55A0A075B6I3 123 aa7.67□□□□□ -1.18
CD44-206ENST00000415148 TMSB15BA0A087X1C1 80 aa7.67□□□□□ -1.18
CD44-206ENST00000415148 GAGE12BA1L429 117 aa7.67□□□□□ -1.18
CD44-206ENST00000415148 TMEM213A2RRL7 107 aa7.67□□□□□ -1.18
CD44-206ENST00000415148 LYNX1G3V0Z9 82 aa7.67□□□□□ -1.18
CD44-206ENST00000415148 SCGB2A1O75556 95 aa7.67□□□□□ -1.18
CD44-206ENST00000415148 LYNX1P0DP58 116 aa7.67□□□□□ -1.18
CD44-206ENST00000415148 ZNF672Q499Z4 452 aaPredicted RBP7.67□□□□□ -1.18
CD44-206ENST00000415148 PRSS57Q6UWY2 283 aa7.67□□□□□ -1.18
CD44-206ENST00000415148 ZNF562Q6V9R5 426 aa7.67□□□□□ -1.18
CD44-206ENST00000415148 TTC9CQ8N5M4 171 aa7.67□□□□□ -1.18
CD44-206ENST00000415148 OR8A1Q8NGG7 326 aa7.67□□□□□ -1.18
CD44-206ENST00000415148 NPFFR1Q9GZQ6 430 aa7.67□□□□□ -1.18
CD44-206ENST00000415148 THYN1Q9P016 225 aa7.67□□□□□ -1.18
CD44-206ENST00000415148 C7orf71A4D174 169 aa7.67□□□□□ -1.18
CD44-206ENST00000415148 RPL7P18124 248 aaKnown RBP7.67□□□□□ -1.18
CD44-206ENST00000415148 BMI1P35226 326 aa7.67□□□□□ -1.18
CD44-206ENST00000415148 C5orf64Q2M2E5 130 aa7.67□□□□□ -1.18
CD44-206ENST00000415148 LGALS9BQ3B8N2 356 aa7.67□□□□□ -1.18
CD44-206ENST00000415148 LGALS9CQ6DKI2 356 aa7.67□□□□□ -1.18
CD44-206ENST00000415148 ANKRD11Q6UB99 2663 aaPredicted RBP7.67□□□□□ -1.18
CD44-206ENST00000415148 LYZL1Q6UWQ5 148 aa7.67□□□□□ -1.18
CD44-206ENST00000415148 WFDC3Q8IUB2 231 aa7.67□□□□□ -1.18
CD44-206ENST00000415148 ORMDL3Q8N138 153 aa7.67□□□□□ -1.18
CD44-206ENST00000415148 FANCD2OSQ96PS1 177 aa7.67□□□□□ -1.18
CD44-206ENST00000415148 ASH1LQ9NR48 2969 aaKnown RBP7.66□□□□□ -1.18
CD44-206ENST00000415148 ODF3BA8MYP8 253 aa7.66□□□□□ -1.18
CD44-206ENST00000415148 SMKR1H3BMG3 65 aa7.66□□□□□ -1.18
CD44-206ENST00000415148 SH2D1AO60880 128 aa7.66□□□□□ -1.18
CD44-206ENST00000415148 FBXL19-AS1Q494R0 122 aa7.66□□□□□ -1.18
CD44-206ENST00000415148 PRELID3AQ96N28 172 aa7.66□□□□□ -1.18
CD44-206ENST00000415148 SIGLEC8Q9NYZ4 499 aa7.66□□□□□ -1.18
CD44-206ENST00000415148 RABAC1Q9UI14 185 aa7.66□□□□□ -1.18
CD44-206ENST00000415148 APC2O95996 2303 aa7.66□□□□□ -1.18
CD44-206ENST00000415148 ZNF292O60281 2723 aa7.66□□□□□ -1.18
CD44-206ENST00000415148 OOSP1A8MZH6 123 aa7.66□□□□□ -1.18
CD44-206ENST00000415148 RIPPLY3P57055 190 aa7.66□□□□□ -1.18
CD44-206ENST00000415148 PRR25Q96S07 402 aa7.66□□□□□ -1.18
CD44-206ENST00000415148 D6R8Y8 96 aa7.65□□□□□ -1.18
CD44-206ENST00000415148 F8W735 103 aaPredicted RBP7.65□□□□□ -1.18
CD44-206ENST00000415148 PRTN3P24158 256 aa7.65□□□□□ -1.18
CD44-206ENST00000415148 SEC11AP67812 179 aa7.65□□□□□ -1.18
CD44-206ENST00000415148 TMEM97Q5BJF2 176 aa7.65□□□□□ -1.18
CD44-206ENST00000415148 PSMG4Q5JS54 123 aa7.65□□□□□ -1.18
CD44-206ENST00000415148 CCDC144NLQ6NUI1 221 aa7.65□□□□□ -1.18
CD44-206ENST00000415148 C1orf122Q6ZSJ8 110 aa7.65□□□□□ -1.18
CD44-206ENST00000415148 AMN1Q8IY45 258 aa7.65□□□□□ -1.18
CD44-206ENST00000415148 C21orf62Q9NYP8 219 aa7.65□□□□□ -1.18
CD44-206ENST00000415148 SIVA1O15304 175 aa7.64□□□□□ -1.19
CD44-206ENST00000415148 GAS8-AS1O95177 125 aa7.64□□□□□ -1.19
CD44-206ENST00000415148 PAX8Q06710 450 aa7.64□□□□□ -1.19
CD44-206ENST00000415148 MRPL51Q4U2R6 128 aaKnown RBP7.64□□□□□ -1.19
CD44-206ENST00000415148 KLF17Q5JT82 389 aaPredicted RBP7.64□□□□□ -1.19
CD44-206ENST00000415148 ARPC1AQ92747 370 aa7.64□□□□□ -1.19
CD44-206ENST00000415148 TIMD4Q96H15 378 aa7.64□□□□□ -1.19
CD44-206ENST00000415148 RIF1Q5UIP0 2472 aaKnown RBP7.64□□□□□ -1.19
CD44-206ENST00000415148 CACNG7P62955 275 aa7.64□□□□□ -1.19
CD44-206ENST00000415148 EBI3Q14213 229 aa7.64□□□□□ -1.19
CD44-206ENST00000415148 UFSP1Q6NVU6 142 aa7.64□□□□□ -1.19
CD44-206ENST00000415148 PCP2Q8IVA1 136 aa7.64□□□□□ -1.19
CD44-206ENST00000415148 MEGF9Q9H1U4 602 aa7.64□□□□□ -1.19
CD44-206ENST00000415148 PEF1Q9UBV8 284 aaKnown RBP7.64□□□□□ -1.19
CD44-206ENST00000415148 LINC01546A6NGU7 62 aa7.63□□□□□ -1.19
CD44-206ENST00000415148 HBDP02042 147 aa7.63□□□□□ -1.19
CD44-206ENST00000415148 IGLC6P0CF74 106 aa7.63□□□□□ -1.19
CD44-206ENST00000415148 TM4SF20Q53R12 229 aa7.63□□□□□ -1.19
CD44-206ENST00000415148 LINC01560Q8TB33 94 aa7.63□□□□□ -1.19
CD44-206ENST00000415148 RAB37Q96AX2 223 aa7.63□□□□□ -1.19
CD44-206ENST00000415148 TTTY13Q9BZ97 58 aa7.63□□□□□ -1.19
CD44-206ENST00000415148 ZFHX2Q9C0A1 2572 aaPredicted RBP7.63□□□□□ -1.19
CD44-206ENST00000415148 H3BUT2 72 aa7.63□□□□□ -1.19
CD44-206ENST00000415148 RAB9AP51151 201 aa7.63□□□□□ -1.19
CD44-206ENST00000415148 HES1Q14469 280 aa7.63□□□□□ -1.19
CD44-206ENST00000415148 IGFL4Q6B9Z1 124 aa7.63□□□□□ -1.19
CD44-206ENST00000415148 ZNF575Q86XF7 245 aa7.63□□□□□ -1.19
CD44-206ENST00000415148 Q8N6K4 173 aa7.63□□□□□ -1.19
CD44-206ENST00000415148 FER1L6-AS1Q8NA97 138 aa7.63□□□□□ -1.19
CD44-206ENST00000415148 OR9G4Q8NGQ1 327 aa7.63□□□□□ -1.19
CD44-206ENST00000415148 EGR2P11161 476 aaPredicted RBP7.62□□□□□ -1.19
CD44-206ENST00000415148 KLK9Q2XQG4 91 aa7.62□□□□□ -1.19
CD44-206ENST00000415148 LINC01559Q495D7 138 aa7.62□□□□□ -1.19
CD44-206ENST00000415148 MINOS1Q5TGZ0 78 aa7.62□□□□□ -1.19
CD44-206ENST00000415148 BOD1L2Q8IYS8 172 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms