RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 CCDC32Q9BV29 185 aa10.92□□□□□ -0.66
ACTB-202ENST00000414620 DNAJC4Q9NNZ3 241 aa10.92□□□□□ -0.66
ACTB-202ENST00000414620 PXMP4Q9Y6I8 212 aa10.92□□□□□ -0.66
ACTB-202ENST00000414620 DNAH2Q9P225 4427 aa10.92□□□□□ -0.66
ACTB-202ENST00000414620 DNAH17Q9UFH2 4485 aa10.92□□□□□ -0.66
ACTB-202ENST00000414620 FAM240BA0A1B0GVZ2 78 aa10.91□□□□□ -0.66
ACTB-202ENST00000414620 FGF7P21781 194 aa10.91□□□□□ -0.66
ACTB-202ENST00000414620 SULT1A1P50225 295 aa10.91□□□□□ -0.66
ACTB-202ENST00000414620 TMEM252Q8N6L7 170 aa10.91□□□□□ -0.66
ACTB-202ENST00000414620 TMEM263Q8WUH6 116 aaKnown RBP10.91□□□□□ -0.66
ACTB-202ENST00000414620 SAT2Q96F10 170 aaPredicted RBP10.91□□□□□ -0.66
ACTB-202ENST00000414620 LYRM2Q9NU23 88 aaPredicted RBP10.91□□□□□ -0.66
ACTB-202ENST00000414620 SLC39A9Q9NUM3 307 aa10.91□□□□□ -0.66
ACTB-202ENST00000414620 ZNF586Q9NXT0 402 aa10.91□□□□□ -0.66
ACTB-202ENST00000414620 NDUFA13Q9P0J0 144 aa10.91□□□□□ -0.66
ACTB-202ENST00000414620 TIMM8BQ9Y5J9 83 aaPredicted RBP10.91□□□□□ -0.66
ACTB-202ENST00000414620 KIAA1109Q2LD37 5005 aa10.91□□□□□ -0.66
ACTB-202ENST00000414620 CBY3A6NI87 242 aa10.9□□□□□ -0.66
ACTB-202ENST00000414620 H7BYZ3 331 aa10.9□□□□□ -0.66
ACTB-202ENST00000414620 VWC2Q2TAL6 325 aa10.9□□□□□ -0.66
ACTB-202ENST00000414620 STX12Q86Y82 276 aa10.9□□□□□ -0.66
ACTB-202ENST00000414620 RNF141Q8WVD5 230 aa10.9□□□□□ -0.66
ACTB-202ENST00000414620 PFDN5Q99471 154 aa10.9□□□□□ -0.66
ACTB-202ENST00000414620 GPN1Q9HCN4 374 aaPredicted RBP10.9□□□□□ -0.66
ACTB-202ENST00000414620 TRAV12-3A0A0B4J271 114 aa10.89□□□□□ -0.67
ACTB-202ENST00000414620 CT45A10P0DMU9 189 aa10.89□□□□□ -0.67
ACTB-202ENST00000414620 S100A11P31949 105 aa10.89□□□□□ -0.67
ACTB-202ENST00000414620 C1orf134Q5TEV5 83 aa10.89□□□□□ -0.67
ACTB-202ENST00000414620 C20orf144Q9BQM9 153 aa10.89□□□□□ -0.67
ACTB-202ENST00000414620 M0R3E3 92 aa10.88□□□□□ -0.67
ACTB-202ENST00000414620 PYYP10082 97 aa10.88□□□□□ -0.67
ACTB-202ENST00000414620 RPL29P47914 159 aaKnown RBP10.88□□□□□ -0.67
ACTB-202ENST00000414620 HBG1P69891 147 aa10.88□□□□□ -0.67
ACTB-202ENST00000414620 HBG2P69892 147 aa10.88□□□□□ -0.67
ACTB-202ENST00000414620 IL15RAQ13261 267 aa10.88□□□□□ -0.67
ACTB-202ENST00000414620 GUK1Q16774 197 aa10.88□□□□□ -0.67
ACTB-202ENST00000414620 SOHLH1Q5JUK2 328 aa10.88□□□□□ -0.67
ACTB-202ENST00000414620 MZT2BQ6NZ67 158 aa10.88□□□□□ -0.67
ACTB-202ENST00000414620 ZNF493Q6ZR52 646 aa10.88□□□□□ -0.67
ACTB-202ENST00000414620 CCDC28AQ8IWP9 274 aa10.88□□□□□ -0.67
ACTB-202ENST00000414620 GAGE12BA1L429 117 aa10.87□□□□□ -0.67
ACTB-202ENST00000414620 NPIPB6E9PJ23 425 aa10.87□□□□□ -0.67
ACTB-202ENST00000414620 GAGE7O76087 117 aa10.87□□□□□ -0.67
ACTB-202ENST00000414620 SIX6O95475 246 aa10.87□□□□□ -0.67
ACTB-202ENST00000414620 GAGE12FP0CL80 117 aa10.87□□□□□ -0.67
ACTB-202ENST00000414620 GAGE12GP0CL81 117 aa10.87□□□□□ -0.67
ACTB-202ENST00000414620 GAGE12IP0CL82 117 aa10.87□□□□□ -0.67
ACTB-202ENST00000414620 LEPP41159 167 aa10.87□□□□□ -0.67
ACTB-202ENST00000414620 ERCC8Q13216 396 aa10.87□□□□□ -0.67
ACTB-202ENST00000414620 OR5I1Q13606 314 aa10.87□□□□□ -0.67
ACTB-202ENST00000414620 GCSAMLQ5JQS6 135 aa10.87□□□□□ -0.67
ACTB-202ENST00000414620 BLNKQ8WV28 456 aa10.87□□□□□ -0.67
ACTB-202ENST00000414620 TRBV19A0A075B6N1 114 aa10.86□□□□□ -0.67
ACTB-202ENST00000414620 SNURFLB1AK76 121 aa10.86□□□□□ -0.67
ACTB-202ENST00000414620 RLN2P04090 185 aa10.86□□□□□ -0.67
ACTB-202ENST00000414620 FAM3BP58499 235 aaPredicted RBP10.86□□□□□ -0.67
ACTB-202ENST00000414620 CLINT1Q14677 625 aa10.86□□□□□ -0.67
ACTB-202ENST00000414620 LRRC37A5PQ49AS3 106 aa10.86□□□□□ -0.67
ACTB-202ENST00000414620 ZNF575Q86XF7 245 aa10.86□□□□□ -0.67
ACTB-202ENST00000414620 ZNRF2Q8NHG8 242 aa10.86□□□□□ -0.67
ACTB-202ENST00000414620 THAP6Q8TBB0 222 aa10.86□□□□□ -0.67
ACTB-202ENST00000414620 ENKURQ8TC29 256 aa10.86□□□□□ -0.67
ACTB-202ENST00000414620 NPCDR1Q9BY65 106 aa10.86□□□□□ -0.67
ACTB-202ENST00000414620 LINC00588Q9Y4M8 146 aa10.86□□□□□ -0.67
ACTB-202ENST00000414620 TRAV26-1A0A087WT03 109 aa10.85□□□□□ -0.67
ACTB-202ENST00000414620 A0A0J9YY99 117 aa10.85□□□□□ -0.67
ACTB-202ENST00000414620 ZNF253O75346 499 aa10.85□□□□□ -0.67
ACTB-202ENST00000414620 NDUFB4O95168 129 aa10.85□□□□□ -0.67
ACTB-202ENST00000414620 CCL18P55774 89 aa10.85□□□□□ -0.67
ACTB-202ENST00000414620 NHLH2Q02577 135 aa10.85□□□□□ -0.67
ACTB-202ENST00000414620 ASAH1Q13510 395 aa10.85□□□□□ -0.67
ACTB-202ENST00000414620 ATP6V1FQ16864 119 aa10.85□□□□□ -0.67
ACTB-202ENST00000414620 EXOC3-AS1Q8N2X6 119 aa10.85□□□□□ -0.67
ACTB-202ENST00000414620 ODF3Q96PU9 254 aa10.85□□□□□ -0.67
ACTB-202ENST00000414620 TIMM9Q9Y5J7 89 aa10.85□□□□□ -0.67
ACTB-202ENST00000414620 MUC4Q99102 2169 aa10.84□□□□□ -0.67
ACTB-202ENST00000414620 NBDYA0A0U1RRE5 68 aa10.84□□□□□ -0.67
ACTB-202ENST00000414620 MED14OSP0DP75 135 aa10.84□□□□□ -0.67
ACTB-202ENST00000414620 HIST1H1EP10412 219 aaKnown RBP10.84□□□□□ -0.67
ACTB-202ENST00000414620 HOXA5P20719 270 aa10.84□□□□□ -0.67
ACTB-202ENST00000414620 BTN1A1Q13410 526 aa10.84□□□□□ -0.67
ACTB-202ENST00000414620 LINC00612Q8N6U2 182 aa10.84□□□□□ -0.67
ACTB-202ENST00000414620 OR5C1Q8NGR4 320 aa10.84□□□□□ -0.67
ACTB-202ENST00000414620 S100ZQ8WXG8 99 aa10.84□□□□□ -0.67
ACTB-202ENST00000414620 GNPNAT1Q96EK6 184 aaPredicted RBP10.84□□□□□ -0.67
ACTB-202ENST00000414620 MRPL53Q96EL3 112 aaKnown RBP10.84□□□□□ -0.67
ACTB-202ENST00000414620 SLC25A2Q9BXI2 301 aa10.84□□□□□ -0.67
ACTB-202ENST00000414620 OR5AC2Q9NZP5 309 aa10.84□□□□□ -0.67
ACTB-202ENST00000414620 TMEM14CQ9P0S9 112 aa10.84□□□□□ -0.67
ACTB-202ENST00000414620 PKHD1P08F94 4074 aa10.84□□□□□ -0.67
ACTB-202ENST00000414620 C7orf71A4D174 169 aa10.83□□□□□ -0.68
ACTB-202ENST00000414620 TNP2Q05952 138 aa10.83□□□□□ -0.68
ACTB-202ENST00000414620 MIR17HGQ75NE6 70 aa10.83□□□□□ -0.68
ACTB-202ENST00000414620 SSX7Q7RTT5 188 aa10.83□□□□□ -0.68
ACTB-202ENST00000414620 CHAC2Q8WUX2 184 aa10.83□□□□□ -0.68
ACTB-202ENST00000414620 PYGO2Q9BRQ0 406 aa10.83□□□□□ -0.68
ACTB-202ENST00000414620 TMPRSS5Q9H3S3 457 aa10.83□□□□□ -0.68
ACTB-202ENST00000414620 DYNC1H1Q14204 4646 aaKnown RBP10.83□□□□□ -0.68
ACTB-202ENST00000414620 IGKV2-40A0A087WW87 121 aaPredicted RBP10.82□□□□□ -0.68
ACTB-202ENST00000414620 MPDU1O75352 247 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms