RNA–Protein interactions for RNA: ENST00000413951.5

SF1-207, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 623 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-207ENST00000413951 TRBV19A0A075B6N1 114 aa12.11□□□□□ -0.47
SF1-207ENST00000413951 IGHV4-28A0A0C4DH34 117 aa12.11□□□□□ -0.47
SF1-207ENST00000413951 PYYP10082 97 aa12.11□□□□□ -0.47
SF1-207ENST00000413951 TAS2R45P59539 299 aa12.11□□□□□ -0.47
SF1-207ENST00000413951 PDE6HQ13956 83 aa12.11□□□□□ -0.47
SF1-207ENST00000413951 PSMG4Q5JS54 123 aa12.11□□□□□ -0.47
SF1-207ENST00000413951 ACTL10Q5JWF8 245 aa12.11□□□□□ -0.47
SF1-207ENST00000413951 C16orf92Q96LL3 132 aa12.11□□□□□ -0.47
SF1-207ENST00000413951 SLC50A1Q9BRV3 221 aa12.11□□□□□ -0.47
SF1-207ENST00000413951 ZNF331Q9NQX6 463 aaPredicted RBP12.11□□□□□ -0.47
SF1-207ENST00000413951 PLA2G2EQ9NZK7 142 aa12.11□□□□□ -0.47
SF1-207ENST00000413951 A0A1W2PPV4 95 aa12.1□□□□□ -0.47
SF1-207ENST00000413951 SLC17A3O00476 420 aa12.1□□□□□ -0.47
SF1-207ENST00000413951 NDUFB4O95168 129 aa12.1□□□□□ -0.47
SF1-207ENST00000413951 STAG3L2P0CL84 134 aa12.1□□□□□ -0.47
SF1-207ENST00000413951 STAG3L3P0CL85 134 aa12.1□□□□□ -0.47
SF1-207ENST00000413951 CDC34P49427 236 aaPredicted RBP12.1□□□□□ -0.47
SF1-207ENST00000413951 FAM122CQ6P4D5 195 aa12.1□□□□□ -0.47
SF1-207ENST00000413951 PQLC2Q6ZP29 291 aa12.1□□□□□ -0.47
SF1-207ENST00000413951 SLC51BQ86UW2 128 aa12.1□□□□□ -0.47
SF1-207ENST00000413951 RAB24Q969Q5 203 aa12.1□□□□□ -0.47
SF1-207ENST00000413951 C20orf173Q96LM9 149 aa12.1□□□□□ -0.47
SF1-207ENST00000413951 PAXXQ9BUH6 204 aa12.1□□□□□ -0.47
SF1-207ENST00000413951 OR51M1Q9H341 326 aa12.1□□□□□ -0.47
SF1-207ENST00000413951 UMAD1C9J7I0 102 aa12.09□□□□□ -0.47
SF1-207ENST00000413951 C4BPBP20851 252 aa12.09□□□□□ -0.47
SF1-207ENST00000413951 HLA-DMBP28068 263 aa12.09□□□□□ -0.47
SF1-207ENST00000413951 ZNF726P1Q15940 193 aa12.09□□□□□ -0.47
SF1-207ENST00000413951 AKR1C8PQ5T2L2 129 aa12.09□□□□□ -0.47
SF1-207ENST00000413951 SSX7Q7RTT5 188 aa12.09□□□□□ -0.47
SF1-207ENST00000413951 ACTR3CQ9C0K3 210 aaPredicted RBP12.09□□□□□ -0.47
SF1-207ENST00000413951 APLNQ9ULZ1 77 aa12.09□□□□□ -0.47
SF1-207ENST00000413951 AGRNO00468 2067 aa12.09□□□□□ -0.47
SF1-207ENST00000413951 KNCNA6PVL3 124 aa12.08□□□□□ -0.48
SF1-207ENST00000413951 H3BTX0 84 aa12.08□□□□□ -0.48
SF1-207ENST00000413951 OR7C2O60412 319 aa12.08□□□□□ -0.48
SF1-207ENST00000413951 SNRPCP09234 159 aaKnown RBP12.08□□□□□ -0.48
SF1-207ENST00000413951 GIG44P09565 113 aaPredicted RBP12.08□□□□□ -0.48
SF1-207ENST00000413951 RBMY1A1P0DJD3 496 aaKnown RBP12.08□□□□□ -0.48
SF1-207ENST00000413951 RBMY1CP0DJD4 496 aa12.08□□□□□ -0.48
SF1-207ENST00000413951 NKX2-5P52952 324 aaPredicted RBP12.08□□□□□ -0.48
SF1-207ENST00000413951 RBMY1FQ15415 496 aaKnown RBP12.08□□□□□ -0.48
SF1-207ENST00000413951 RNF182Q8N6D2 247 aa12.08□□□□□ -0.48
SF1-207ENST00000413951 RNF141Q8WVD5 230 aa12.08□□□□□ -0.48
SF1-207ENST00000413951 CLEC5AQ9NY25 188 aa12.08□□□□□ -0.48
SF1-207ENST00000413951 KMT2AQ03164 3969 aa12.07□□□□□ -0.48
SF1-207ENST00000413951 CTXND1A0A1B0GTU2 59 aa12.07□□□□□ -0.48
SF1-207ENST00000413951 EIF3GO75821 320 aaKnown RBP eCLIP12.07□□□□□ -0.48
SF1-207ENST00000413951 OR10J4P0C629 311 aa12.07□□□□□ -0.48
SF1-207ENST00000413951 NBEAP1P0C6P0 100 aa12.07□□□□□ -0.48
SF1-207ENST00000413951 UBE2L3P68036 154 aaKnown RBP12.07□□□□□ -0.48
SF1-207ENST00000413951 IGFL4Q6B9Z1 124 aa12.07□□□□□ -0.48
SF1-207ENST00000413951 FOXI2Q6ZQN5 318 aa12.07□□□□□ -0.48
SF1-207ENST00000413951 SUN5Q8TC36 379 aa12.07□□□□□ -0.48
SF1-207ENST00000413951 TMED6Q8WW62 240 aa12.07□□□□□ -0.48
SF1-207ENST00000413951 LINC00052Q96N35 136 aa12.07□□□□□ -0.48
SF1-207ENST00000413951 SAV1Q9H4B6 383 aaPredicted RBP12.07□□□□□ -0.48
SF1-207ENST00000413951 ARL14EPLP0DKL9 152 aa12.06□□□□□ -0.48
SF1-207ENST00000413951 HLA-DRB4P13762 266 aa12.06□□□□□ -0.48
SF1-207ENST00000413951 PSG3Q16557 428 aa12.06□□□□□ -0.48
SF1-207ENST00000413951 CSNK1G2-AS1Q8NCQ2 148 aa12.06□□□□□ -0.48
SF1-207ENST00000413951 LRRC20Q8TCA0 184 aa12.06□□□□□ -0.48
SF1-207ENST00000413951 MRPL53Q96EL3 112 aaKnown RBP12.06□□□□□ -0.48
SF1-207ENST00000413951 CLUHP3Q96NS8 147 aa12.06□□□□□ -0.48
SF1-207ENST00000413951 HLA-DRB4X5D2U9 266 aa12.06□□□□□ -0.48
SF1-207ENST00000413951 X6R8D5 127 aa12.06□□□□□ -0.48
SF1-207ENST00000413951 IGHV4-4A0A075B6R2 117 aa12.05□□□□□ -0.48
SF1-207ENST00000413951 A0A0J9YX75 114 aa12.05□□□□□ -0.48
SF1-207ENST00000413951 TMEM189A5PLL7 270 aa12.05□□□□□ -0.48
SF1-207ENST00000413951 A8MTW9 85 aa12.05□□□□□ -0.48
SF1-207ENST00000413951 H3BMM0 161 aa12.05□□□□□ -0.48
SF1-207ENST00000413951 DEFB1P60022 68 aa12.05□□□□□ -0.48
SF1-207ENST00000413951 PSG9Q00887 426 aa12.05□□□□□ -0.48
SF1-207ENST00000413951 EIF5AL1Q6IS14 154 aaKnown RBP12.05□□□□□ -0.48
SF1-207ENST00000413951 DPPA3Q6W0C5 159 aa12.05□□□□□ -0.48
SF1-207ENST00000413951 Q6ZTC4 211 aa12.05□□□□□ -0.48
SF1-207ENST00000413951 LINC00336Q6ZUF6 198 aa12.05□□□□□ -0.48
SF1-207ENST00000413951 PHYHIPLQ96FC7 376 aa12.05□□□□□ -0.48
SF1-207ENST00000413951 SMIM9A6NGZ8 99 aa12.04□□□□□ -0.48
SF1-207ENST00000413951 HMGB3O15347 200 aaKnown RBP12.04□□□□□ -0.48
SF1-207ENST00000413951 CXorf1O96002 111 aa12.04□□□□□ -0.48
SF1-207ENST00000413951 P0DMU3 169 aa12.04□□□□□ -0.48
SF1-207ENST00000413951 FAM231AP0DMU4 169 aa12.04□□□□□ -0.48
SF1-207ENST00000413951 FAM231CP0DMU5 169 aa12.04□□□□□ -0.48
SF1-207ENST00000413951 GCHFRP30047 84 aa12.04□□□□□ -0.48
SF1-207ENST00000413951 FHITP49789 147 aa12.04□□□□□ -0.48
SF1-207ENST00000413951 GDF5OSQ5U4N7 250 aa12.04□□□□□ -0.48
SF1-207ENST00000413951 LYPD1Q8N2G4 141 aa12.04□□□□□ -0.48
SF1-207ENST00000413951 BLNKQ8WV28 456 aa12.04□□□□□ -0.48
SF1-207ENST00000413951 DEFB131BA0A096LNP1 70 aa12.03□□□□□ -0.48
SF1-207ENST00000413951 TEX48A0A1B0GUV7 120 aa12.03□□□□□ -0.48
SF1-207ENST00000413951 F6UB75 175 aa12.03□□□□□ -0.48
SF1-207ENST00000413951 AMBPP02760 352 aa12.03□□□□□ -0.48
SF1-207ENST00000413951 RAB5CP51148 216 aa12.03□□□□□ -0.48
SF1-207ENST00000413951 ZNF738Q8NE65 137 aa12.03□□□□□ -0.48
SF1-207ENST00000413951 MBD3L1Q8WWY6 194 aa12.03□□□□□ -0.48
SF1-207ENST00000413951 RPUSD4Q96CM3 377 aaKnown RBP12.03□□□□□ -0.48
SF1-207ENST00000413951 NEU1Q99519 415 aa12.03□□□□□ -0.48
SF1-207ENST00000413951 NDUFAF3Q9BU61 184 aa12.03□□□□□ -0.48
SF1-207ENST00000413951 PRELID1Q9Y255 219 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms