RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 H0YJW9 148 aa4.11□□□□□ -1.75
LINC00342-201ENST00000412393 ISLRO14498 428 aa4.11□□□□□ -1.75
LINC00342-201ENST00000412393 RBFOX2O43251 390 aaKnown RBP eCLIP4.11□□□□□ -1.75
LINC00342-201ENST00000412393 SERF1AO75920 110 aa4.11□□□□□ -1.75
LINC00342-201ENST00000412393 CXorf1O96002 111 aa4.11□□□□□ -1.75
LINC00342-201ENST00000412393 HLA-DQA1P01909 254 aa4.11□□□□□ -1.75
LINC00342-201ENST00000412393 HBZP02008 142 aa4.11□□□□□ -1.75
LINC00342-201ENST00000412393 LINC00869P0C866 280 aa4.11□□□□□ -1.75
LINC00342-201ENST00000412393 TSPOP30536 169 aa4.11□□□□□ -1.75
LINC00342-201ENST00000412393 CDC34P49427 236 aaPredicted RBP4.11□□□□□ -1.75
LINC00342-201ENST00000412393 FGF8P55075 233 aaPredicted RBP4.11□□□□□ -1.75
LINC00342-201ENST00000412393 KLF5Q13887 457 aaPredicted RBP4.11□□□□□ -1.75
LINC00342-201ENST00000412393 EBI3Q14213 229 aa4.11□□□□□ -1.75
LINC00342-201ENST00000412393 MMDQ15546 238 aa4.11□□□□□ -1.75
LINC00342-201ENST00000412393 KPRPQ5T749 579 aaPredicted RBP4.11□□□□□ -1.75
LINC00342-201ENST00000412393 FAM78BQ5VT40 261 aa4.11□□□□□ -1.75
LINC00342-201ENST00000412393 KRTAP5-4Q6L8H1 288 aa4.11□□□□□ -1.75
LINC00342-201ENST00000412393 SLC25A48Q6ZT89 311 aaKnown RBP4.11□□□□□ -1.75
LINC00342-201ENST00000412393 ZNF329Q86UD4 541 aa4.11□□□□□ -1.75
LINC00342-201ENST00000412393 ZNF439Q8NDP4 499 aa4.11□□□□□ -1.75
LINC00342-201ENST00000412393 OR1L1Q8NH94 360 aa4.11□□□□□ -1.75
LINC00342-201ENST00000412393 OCC1Q8TAD7 63 aa4.11□□□□□ -1.75
LINC00342-201ENST00000412393 TMEM190Q8WZ59 177 aa4.11□□□□□ -1.75
LINC00342-201ENST00000412393 ST6GALNAC6Q969X2 333 aa4.11□□□□□ -1.75
LINC00342-201ENST00000412393 ZNF430Q9H8G1 570 aaPredicted RBP4.11□□□□□ -1.75
LINC00342-201ENST00000412393 NRN1Q9NPD7 142 aa4.11□□□□□ -1.75
LINC00342-201ENST00000412393 SMPXQ9UHP9 88 aa4.11□□□□□ -1.75
LINC00342-201ENST00000412393 TGP01266 2768 aa4.1□□□□□ -1.75
LINC00342-201ENST00000412393 TRAV9-2A0A087WT02 112 aa4.1□□□□□ -1.75
LINC00342-201ENST00000412393 SMIM27A0A1W2PRY6 76 aa4.1□□□□□ -1.75
LINC00342-201ENST00000412393 A0A1W2PS18 150 aa4.1□□□□□ -1.75
LINC00342-201ENST00000412393 IGLC7A0M8Q6 106 aa4.1□□□□□ -1.75
LINC00342-201ENST00000412393 PRSS46E5RG02 174 aa4.1□□□□□ -1.75
LINC00342-201ENST00000412393 HMGB3O15347 200 aaKnown RBP4.1□□□□□ -1.75
LINC00342-201ENST00000412393 ZNF324O75467 553 aaPredicted RBP4.1□□□□□ -1.75
LINC00342-201ENST00000412393 OR2J3O76001 311 aa4.1□□□□□ -1.75
LINC00342-201ENST00000412393 S1PR2O95136 353 aa4.1□□□□□ -1.75
LINC00342-201ENST00000412393 NDUFB4O95168 129 aa4.1□□□□□ -1.75
LINC00342-201ENST00000412393 MT-CO2P00403 227 aa4.1□□□□□ -1.75
LINC00342-201ENST00000412393 MOSP00540 346 aa4.1□□□□□ -1.75
LINC00342-201ENST00000412393 IGHG2P01859 326 aa4.1□□□□□ -1.75
LINC00342-201ENST00000412393 HLA-DRB1P01911 266 aa4.1□□□□□ -1.75
LINC00342-201ENST00000412393 PRB2P02812 416 aaPredicted RBP4.1□□□□□ -1.75
LINC00342-201ENST00000412393 IGLL1P15814 213 aa4.1□□□□□ -1.75
LINC00342-201ENST00000412393 NPY1RP25929 384 aa4.1□□□□□ -1.75
LINC00342-201ENST00000412393 ZNF137PP52743 207 aa4.1□□□□□ -1.75
LINC00342-201ENST00000412393 SLC35B1P78383 322 aa4.1□□□□□ -1.75
LINC00342-201ENST00000412393 RTL8BQ17RB0 113 aa4.1□□□□□ -1.75
LINC00342-201ENST00000412393 OCIAD2Q56VL3 154 aa4.1□□□□□ -1.75
LINC00342-201ENST00000412393 CT45A1Q5HYN5 189 aa4.1□□□□□ -1.75
LINC00342-201ENST00000412393 SPANXN5Q5MJ07 72 aa4.1□□□□□ -1.75
LINC00342-201ENST00000412393 FFAR4Q5NUL3 377 aa4.1□□□□□ -1.75
LINC00342-201ENST00000412393 PRR27Q6MZM9 219 aa4.1□□□□□ -1.75
LINC00342-201ENST00000412393 FAM231DQ6ZW35 169 aa4.1□□□□□ -1.75
LINC00342-201ENST00000412393 NIT1Q86X76 327 aa4.1□□□□□ -1.75
LINC00342-201ENST00000412393 Q8N6K4 173 aa4.1□□□□□ -1.75
LINC00342-201ENST00000412393 Q8N9W7 124 aa4.1□□□□□ -1.75
LINC00342-201ENST00000412393 WFDC9Q8NEX5 89 aa4.1□□□□□ -1.75
LINC00342-201ENST00000412393 OR52L2PQ8NGH6 319 aa4.1□□□□□ -1.75
LINC00342-201ENST00000412393 OR51H1Q8NH63 302 aa4.1□□□□□ -1.75
LINC00342-201ENST00000412393 CT45A3Q8NHU0 189 aa4.1□□□□□ -1.75
LINC00342-201ENST00000412393 GALMQ96C23 342 aa4.1□□□□□ -1.75
LINC00342-201ENST00000412393 S1PR3Q99500 378 aa4.1□□□□□ -1.75
LINC00342-201ENST00000412393 ST20Q9HBF5 79 aa4.1□□□□□ -1.75
LINC00342-201ENST00000412393 LINC00527Q9UJ94 153 aa4.1□□□□□ -1.75
LINC00342-201ENST00000412393 JPT1Q9UK76 154 aa4.1□□□□□ -1.75
LINC00342-201ENST00000412393 LSM4Q9Y4Z0 139 aaKnown RBP4.1□□□□□ -1.75
LINC00342-201ENST00000412393 V9GYV3 84 aa4.1□□□□□ -1.75
LINC00342-201ENST00000412393 SERTM2A0A1B0GWG4 89 aa4.09□□□□□ -1.75
LINC00342-201ENST00000412393 FCN1O00602 326 aa4.09□□□□□ -1.75
LINC00342-201ENST00000412393 OR5AL1P0C617 328 aa4.09□□□□□ -1.75
LINC00342-201ENST00000412393 C3orf79P0CE67 100 aa4.09□□□□□ -1.75
LINC00342-201ENST00000412393 PMCHP20382 165 aa4.09□□□□□ -1.75
LINC00342-201ENST00000412393 GPR12P47775 334 aa4.09□□□□□ -1.75
LINC00342-201ENST00000412393 THBS3P49746 956 aa4.09□□□□□ -1.75
LINC00342-201ENST00000412393 HTD2P86397 168 aa4.09□□□□□ -1.75
LINC00342-201ENST00000412393 ZNF90Q03938 601 aa4.09□□□□□ -1.75
LINC00342-201ENST00000412393 RPEL1Q2QD12 228 aa4.09□□□□□ -1.75
LINC00342-201ENST00000412393 SPATA45Q537H7 98 aa4.09□□□□□ -1.75
LINC00342-201ENST00000412393 CST9LP1Q5W188 147 aa4.09□□□□□ -1.75
LINC00342-201ENST00000412393 FAM71F2Q6NXP2 309 aa4.09□□□□□ -1.75
LINC00342-201ENST00000412393 TMEM136Q6ZRR5 245 aa4.09□□□□□ -1.75
LINC00342-201ENST00000412393 C18orf65Q6ZTR6 163 aa4.09□□□□□ -1.75
LINC00342-201ENST00000412393 BAGE3Q86Y29 109 aa4.09□□□□□ -1.75
LINC00342-201ENST00000412393 BAGE2Q86Y30 109 aa4.09□□□□□ -1.75
LINC00342-201ENST00000412393 MMD2Q8IY49 270 aa4.09□□□□□ -1.75
LINC00342-201ENST00000412393 DEFB125Q8N687 156 aa4.09□□□□□ -1.75
LINC00342-201ENST00000412393 ZNF645Q8N7E2 425 aa4.09□□□□□ -1.75
LINC00342-201ENST00000412393 NECAP1Q8NC96 275 aa4.09□□□□□ -1.75
LINC00342-201ENST00000412393 KLHL30-AS1Q8NEE0 82 aa4.09□□□□□ -1.75
LINC00342-201ENST00000412393 MRAPQ8TCY5 172 aa4.09□□□□□ -1.75
LINC00342-201ENST00000412393 VN1R17PQ8TDU5 208 aa4.09□□□□□ -1.75
LINC00342-201ENST00000412393 KCNS1Q96KK3 526 aa4.09□□□□□ -1.75
LINC00342-201ENST00000412393 UHRF2Q96PU4 802 aa4.09□□□□□ -1.75
LINC00342-201ENST00000412393 RASL11BQ9BPW5 248 aa4.09□□□□□ -1.75
LINC00342-201ENST00000412393 NABP2Q9BQ15 211 aa4.09□□□□□ -1.75
LINC00342-201ENST00000412393 CHRDL1Q9BU40 450 aa4.09□□□□□ -1.75
LINC00342-201ENST00000412393 COMMD5Q9GZQ3 224 aa4.09□□□□□ -1.75
LINC00342-201ENST00000412393 CST9LQ9H4G1 147 aa4.09□□□□□ -1.75
LINC00342-201ENST00000412393 GNB4Q9HAV0 340 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms