RNA–Protein interactions for RNA: ENST00000412328.5

HSPG2-204, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-204ENST00000412328 DKK2Q9UBU2 259 aa12.41□□□□□ -0.42
HSPG2-204ENST00000412328 TMEM189A5PLL7 270 aa12.4□□□□□ -0.42
HSPG2-204ENST00000412328 FCN2Q15485 313 aa12.4□□□□□ -0.42
HSPG2-204ENST00000412328 LRRC20Q8TCA0 184 aa12.4□□□□□ -0.42
HSPG2-204ENST00000412328 PARD6GQ9BYG4 376 aaPredicted RBP12.4□□□□□ -0.42
HSPG2-204ENST00000412328 TRAV10A0A0B4J240 114 aa12.39□□□□□ -0.43
HSPG2-204ENST00000412328 LOC102723971A0A1B0GUV8 181 aa12.39□□□□□ -0.43
HSPG2-204ENST00000412328 NPIPB6E9PJ23 425 aa12.39□□□□□ -0.43
HSPG2-204ENST00000412328 PRM2P04554 102 aa12.39□□□□□ -0.43
HSPG2-204ENST00000412328 PDE6HQ13956 83 aa12.39□□□□□ -0.43
HSPG2-204ENST00000412328 KIR3DS1Q14943 382 aa12.39□□□□□ -0.43
HSPG2-204ENST00000412328 MRPL53Q96EL3 112 aaKnown RBP12.39□□□□□ -0.43
HSPG2-204ENST00000412328 ZNF503Q96F45 646 aa12.39□□□□□ -0.43
HSPG2-204ENST00000412328 MRPL32Q9BYC8 188 aaKnown RBP12.39□□□□□ -0.43
HSPG2-204ENST00000412328 KCNIP2Q9NS61 270 aa12.39□□□□□ -0.43
HSPG2-204ENST00000412328 NACAE9PAV3 2078 aa12.38□□□□□ -0.43
HSPG2-204ENST00000412328 M0R3E3 92 aa12.38□□□□□ -0.43
HSPG2-204ENST00000412328 LY6G6CO95867 125 aa12.38□□□□□ -0.43
HSPG2-204ENST00000412328 HBE1P02100 147 aa12.38□□□□□ -0.43
HSPG2-204ENST00000412328 HIST1H1EP10412 219 aaKnown RBP12.38□□□□□ -0.43
HSPG2-204ENST00000412328 TCTAP57738 103 aa12.38□□□□□ -0.43
HSPG2-204ENST00000412328 FAM222AQ5U5X8 452 aa12.38□□□□□ -0.43
HSPG2-204ENST00000412328 LGALS9CQ6DKI2 356 aa12.38□□□□□ -0.43
HSPG2-204ENST00000412328 FXYD5Q96DB9 178 aa12.38□□□□□ -0.43
HSPG2-204ENST00000412328 SMIM3Q9BZL3 60 aa12.38□□□□□ -0.43
HSPG2-204ENST00000412328 YTHDF2Q9Y5A9 579 aaKnown RBP12.38□□□□□ -0.43
HSPG2-204ENST00000412328 TSPOP30536 169 aa12.37□□□□□ -0.43
HSPG2-204ENST00000412328 CDKN1BP46527 198 aa12.37□□□□□ -0.43
HSPG2-204ENST00000412328 RRN3P1Q2M238 152 aa12.37□□□□□ -0.43
HSPG2-204ENST00000412328 ODF3Q96PU9 254 aa12.37□□□□□ -0.43
HSPG2-204ENST00000412328 FUT9Q9Y231 359 aa12.37□□□□□ -0.43
HSPG2-204ENST00000412328 IGHV4-4A0A075B6R2 117 aa12.36□□□□□ -0.43
HSPG2-204ENST00000412328 G3V3Q6 166 aa12.36□□□□□ -0.43
HSPG2-204ENST00000412328 SPART-AS1P0CW21 52 aa12.36□□□□□ -0.43
HSPG2-204ENST00000412328 EMP1P54849 157 aa12.36□□□□□ -0.43
HSPG2-204ENST00000412328 OXA1LQ15070 435 aa12.36□□□□□ -0.43
HSPG2-204ENST00000412328 Q5BKY6 102 aa12.36□□□□□ -0.43
HSPG2-204ENST00000412328 GFI1BQ5VTD9 330 aa12.36□□□□□ -0.43
HSPG2-204ENST00000412328 RPP25LQ8N5L8 163 aaKnown RBP12.36□□□□□ -0.43
HSPG2-204ENST00000412328 FAM19A4Q96LR4 140 aa12.36□□□□□ -0.43
HSPG2-204ENST00000412328 DEFB131BA0A096LNP1 70 aa12.35□□□□□ -0.43
HSPG2-204ENST00000412328 ZNF705GA8MUZ8 300 aaPredicted RBP12.35□□□□□ -0.43
HSPG2-204ENST00000412328 C17orf112F2Z3M2 114 aa12.35□□□□□ -0.43
HSPG2-204ENST00000412328 CT45A10P0DMU9 189 aa12.35□□□□□ -0.43
HSPG2-204ENST00000412328 AZU1P20160 251 aa12.35□□□□□ -0.43
HSPG2-204ENST00000412328 RHOBP62745 196 aa12.35□□□□□ -0.43
HSPG2-204ENST00000412328 TMEM256Q8N2U0 113 aa12.35□□□□□ -0.43
HSPG2-204ENST00000412328 EXOC3-AS1Q8N2X6 119 aa12.35□□□□□ -0.43
HSPG2-204ENST00000412328 PHYHIPLQ96FC7 376 aa12.35□□□□□ -0.43
HSPG2-204ENST00000412328 AQP10Q96PS8 301 aa12.35□□□□□ -0.43
HSPG2-204ENST00000412328 TEX48A0A1B0GUV7 120 aa12.34□□□□□ -0.43
HSPG2-204ENST00000412328 IGLL5B9A064 214 aa12.34□□□□□ -0.43
HSPG2-204ENST00000412328 OR10J6PQ8NGY7 276 aa12.34□□□□□ -0.43
HSPG2-204ENST00000412328 RNASE8Q8TDE3 154 aaKnown RBP12.34□□□□□ -0.43
HSPG2-204ENST00000412328 C20orf144Q9BQM9 153 aa12.34□□□□□ -0.43
HSPG2-204ENST00000412328 MED28Q9H204 178 aa12.34□□□□□ -0.43
HSPG2-204ENST00000412328 PLA2G2EQ9NZK7 142 aa12.34□□□□□ -0.43
HSPG2-204ENST00000412328 GIPP09681 153 aaPredicted RBP12.33□□□□□ -0.44
HSPG2-204ENST00000412328 FFAR4Q5NUL3 377 aa12.33□□□□□ -0.44
HSPG2-204ENST00000412328 BLNKQ8WV28 456 aa12.33□□□□□ -0.44
HSPG2-204ENST00000412328 NIPSNAP3BQ9BS92 247 aa12.33□□□□□ -0.44
HSPG2-204ENST00000412328 TMEM208Q9BTX3 173 aa12.33□□□□□ -0.44
HSPG2-204ENST00000412328 OR51M1Q9H341 326 aa12.33□□□□□ -0.44
HSPG2-204ENST00000412328 HECTD4Q9Y4D8 3996 aa12.32□□□□□ -0.44
HSPG2-204ENST00000412328 RNF222A6NCQ9 220 aa12.32□□□□□ -0.44
HSPG2-204ENST00000412328 OR10J4P0C629 311 aa12.32□□□□□ -0.44
HSPG2-204ENST00000412328 TAS2R60P59551 318 aa12.32□□□□□ -0.44
HSPG2-204ENST00000412328 PAXXQ9BUH6 204 aa12.32□□□□□ -0.44
HSPG2-204ENST00000412328 PRELID1Q9Y255 219 aa12.32□□□□□ -0.44
HSPG2-204ENST00000412328 TIMM9Q9Y5J7 89 aa12.32□□□□□ -0.44
HSPG2-204ENST00000412328 DNAH2Q9P225 4427 aa12.31□□□□□ -0.44
HSPG2-204ENST00000412328 KLLNB2CW77 178 aa12.31□□□□□ -0.44
HSPG2-204ENST00000412328 EIF3GO75821 320 aaKnown RBP eCLIP12.31□□□□□ -0.44
HSPG2-204ENST00000412328 NBEAP1P0C6P0 100 aa12.31□□□□□ -0.44
HSPG2-204ENST00000412328 ERCC8Q13216 396 aa12.31□□□□□ -0.44
HSPG2-204ENST00000412328 ICAM4Q14773 271 aa12.31□□□□□ -0.44
HSPG2-204ENST00000412328 RGS21Q2M5E4 152 aa12.31□□□□□ -0.44
HSPG2-204ENST00000412328 ASB13Q8WXK3 278 aa12.31□□□□□ -0.44
HSPG2-204ENST00000412328 IGKV2-40A0A087WW87 121 aaPredicted RBP12.3□□□□□ -0.44
HSPG2-204ENST00000412328 LYRM9A8MSI8 78 aa12.3□□□□□ -0.44
HSPG2-204ENST00000412328 IFNA5P01569 189 aa12.3□□□□□ -0.44
HSPG2-204ENST00000412328 IGKV2D-40P01614 121 aaPredicted RBP12.3□□□□□ -0.44
HSPG2-204ENST00000412328 RAB2AP61019 212 aa12.3□□□□□ -0.44
HSPG2-204ENST00000412328 PRR9Q5T870 116 aa12.3□□□□□ -0.44
HSPG2-204ENST00000412328 C9orf47Q6ZRZ4 202 aa12.3□□□□□ -0.44
HSPG2-204ENST00000412328 OR2G3Q8NGZ4 309 aa12.3□□□□□ -0.44
HSPG2-204ENST00000412328 TMEM263Q8WUH6 116 aaKnown RBP12.3□□□□□ -0.44
HSPG2-204ENST00000412328 RNF141Q8WVD5 230 aa12.3□□□□□ -0.44
HSPG2-204ENST00000412328 C16orf74Q96GX8 76 aa12.3□□□□□ -0.44
HSPG2-204ENST00000412328 AGPAT4-IT1Q9H0P7 198 aa12.3□□□□□ -0.44
HSPG2-204ENST00000412328 FAT2Q9NYQ8 4349 aa12.29□□□□□ -0.44
HSPG2-204ENST00000412328 H7BYZ3 331 aa12.29□□□□□ -0.44
HSPG2-204ENST00000412328 CRISP2P16562 243 aa12.29□□□□□ -0.44
HSPG2-204ENST00000412328 LEPP41159 167 aa12.29□□□□□ -0.44
HSPG2-204ENST00000412328 KHDC3LQ587J8 217 aa12.29□□□□□ -0.44
HSPG2-204ENST00000412328 PPP1R14DQ9NXH3 145 aa12.29□□□□□ -0.44
HSPG2-204ENST00000412328 OR7C2O60412 319 aa12.28□□□□□ -0.44
HSPG2-204ENST00000412328 M6PRP20645 277 aa12.28□□□□□ -0.44
HSPG2-204ENST00000412328 UBE2L3P68036 154 aaKnown RBP12.28□□□□□ -0.44
HSPG2-204ENST00000412328 FAM122CQ6P4D5 195 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms