RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 Q8N976 141 aa1.56□□□□□ -2.16
RNU4-53P-201ENST00000410828 NHLRC2Q8NBF2 726 aa1.56□□□□□ -2.16
RNU4-53P-201ENST00000410828 HSD17B11Q8NBQ5 300 aa1.56□□□□□ -2.16
RNU4-53P-201ENST00000410828 OR13C8Q8NGS7 320 aa1.56□□□□□ -2.16
RNU4-53P-201ENST00000410828 LHFPL5Q8TAF8 219 aa1.56□□□□□ -2.16
RNU4-53P-201ENST00000410828 MARCH1Q8TCQ1 289 aa1.56□□□□□ -2.16
RNU4-53P-201ENST00000410828 BLNKQ8WV28 456 aa1.56□□□□□ -2.16
RNU4-53P-201ENST00000410828 CIB3Q96Q77 187 aaPredicted RBP1.56□□□□□ -2.16
RNU4-53P-201ENST00000410828 ARPC5LQ9BPX5 153 aa1.56□□□□□ -2.16
RNU4-53P-201ENST00000410828 KRTAP9-2Q9BYQ4 174 aa1.56□□□□□ -2.16
RNU4-53P-201ENST00000410828 SLC25A31Q9H0C2 315 aa1.56□□□□□ -2.16
RNU4-53P-201ENST00000410828 RBKSQ9H477 322 aa1.56□□□□□ -2.16
RNU4-53P-201ENST00000410828 DPH3P1Q9H4G8 78 aa1.56□□□□□ -2.16
RNU4-53P-201ENST00000410828 NAA60Q9H7X0 242 aa1.56□□□□□ -2.16
RNU4-53P-201ENST00000410828 ZNF331Q9NQX6 463 aaPredicted RBP1.56□□□□□ -2.16
RNU4-53P-201ENST00000410828 MRPL16Q9NX20 251 aaKnown RBP1.56□□□□□ -2.16
RNU4-53P-201ENST00000410828 HSPB7Q9UBY9 170 aa1.56□□□□□ -2.16
RNU4-53P-201ENST00000410828 SHPKQ9UHJ6 478 aa1.56□□□□□ -2.16
RNU4-53P-201ENST00000410828 C14orf166Q9Y224 244 aaKnown RBP1.56□□□□□ -2.16
RNU4-53P-201ENST00000410828 HIGD1AQ9Y241 93 aa1.56□□□□□ -2.16
RNU4-53P-201ENST00000410828 KCNIP3Q9Y2W7 256 aa1.56□□□□□ -2.16
RNU4-53P-201ENST00000410828 KLF12Q9Y4X4 402 aa1.56□□□□□ -2.16
RNU4-53P-201ENST00000410828 COX11Q9Y6N1 276 aa1.56□□□□□ -2.16
RNU4-53P-201ENST00000410828 PIGBOS1A0A0B4J2F0 54 aa1.55□□□□□ -2.16
RNU4-53P-201ENST00000410828 KRTAP9-6A0A140TA67 174 aa1.55□□□□□ -2.16
RNU4-53P-201ENST00000410828 LINC00854A0A1B0GVQ3 168 aa1.55□□□□□ -2.16
RNU4-53P-201ENST00000410828 SMCO3A2RU48 225 aa1.55□□□□□ -2.16
RNU4-53P-201ENST00000410828 RNF222A6NCQ9 220 aa1.55□□□□□ -2.16
RNU4-53P-201ENST00000410828 FABP12A6NFH5 140 aa1.55□□□□□ -2.16
RNU4-53P-201ENST00000410828 PMS2P5A8MQ11 134 aa1.55□□□□□ -2.16
RNU4-53P-201ENST00000410828 KLLNB2CW77 178 aa1.55□□□□□ -2.16
RNU4-53P-201ENST00000410828 C9JCJ5 164 aa1.55□□□□□ -2.16
RNU4-53P-201ENST00000410828 PRAC2D3DTV9 90 aa1.55□□□□□ -2.16
RNU4-53P-201ENST00000410828 RGS13O14921 159 aa1.55□□□□□ -2.16
RNU4-53P-201ENST00000410828 LECT2O14960 151 aa1.55□□□□□ -2.16
RNU4-53P-201ENST00000410828 MRPS12O15235 138 aaKnown RBP1.55□□□□□ -2.16
RNU4-53P-201ENST00000410828 MED6O75586 246 aa1.55□□□□□ -2.16
RNU4-53P-201ENST00000410828 GAS8-AS1O95177 125 aa1.55□□□□□ -2.16
RNU4-53P-201ENST00000410828 RAB3DO95716 219 aa1.55□□□□□ -2.16
RNU4-53P-201ENST00000410828 IGHV3-30P01768 117 aa1.55□□□□□ -2.16
RNU4-53P-201ENST00000410828 IGHV3-33P01772 117 aa1.55□□□□□ -2.16
RNU4-53P-201ENST00000410828 PFN1P07737 140 aaKnown RBP1.55□□□□□ -2.16
RNU4-53P-201ENST00000410828 NMBP08949 121 aa1.55□□□□□ -2.16
RNU4-53P-201ENST00000410828 SFTA3P0C7M3 94 aa1.55□□□□□ -2.16
RNU4-53P-201ENST00000410828 LINC00869P0C866 280 aa1.55□□□□□ -2.16
RNU4-53P-201ENST00000410828 CT45A10P0DMU9 189 aa1.55□□□□□ -2.16
RNU4-53P-201ENST00000410828 IGHV3-30-3P0DP02 117 aa1.55□□□□□ -2.16
RNU4-53P-201ENST00000410828 IGHV3-30-5P0DP03 117 aa1.55□□□□□ -2.16
RNU4-53P-201ENST00000410828 ANXA3P12429 323 aa1.55□□□□□ -2.16
RNU4-53P-201ENST00000410828 RNASE4P34096 147 aaKnown RBP1.55□□□□□ -2.16
RNU4-53P-201ENST00000410828 RPS19P39019 145 aaKnown RBP1.55□□□□□ -2.16
RNU4-53P-201ENST00000410828 HNRNPA3P51991 378 aaKnown RBP1.55□□□□□ -2.16
RNU4-53P-201ENST00000410828 TAS2R19P59542 299 aa1.55□□□□□ -2.16
RNU4-53P-201ENST00000410828 PLP1P60201 277 aa1.55□□□□□ -2.16
RNU4-53P-201ENST00000410828 GABARAPL2P60520 117 aa1.55□□□□□ -2.16
RNU4-53P-201ENST00000410828 SELENOTP62341 195 aa1.55□□□□□ -2.16
RNU4-53P-201ENST00000410828 SRPXP78539 464 aa1.55□□□□□ -2.16
RNU4-53P-201ENST00000410828 LAGE3Q14657 143 aa1.55□□□□□ -2.16
RNU4-53P-201ENST00000410828 ZNF846Q147U1 533 aa1.55□□□□□ -2.16
RNU4-53P-201ENST00000410828 OR10J3Q5JRS4 329 aa1.55□□□□□ -2.16
RNU4-53P-201ENST00000410828 TOR2AQ5JU69 321 aa1.55□□□□□ -2.16
RNU4-53P-201ENST00000410828 PXDC1Q5TGL8 231 aa1.55□□□□□ -2.16
RNU4-53P-201ENST00000410828 FAM122CQ6P4D5 195 aa1.55□□□□□ -2.16
RNU4-53P-201ENST00000410828 C9orf47Q6ZRZ4 202 aa1.55□□□□□ -2.16
RNU4-53P-201ENST00000410828 CYP2G1PQ6ZSU1 146 aa1.55□□□□□ -2.16
RNU4-53P-201ENST00000410828 ACOT7LQ6ZUV0 252 aa1.55□□□□□ -2.16
RNU4-53P-201ENST00000410828 BPIFA4PQ86YQ2 179 aa1.55□□□□□ -2.16
RNU4-53P-201ENST00000410828 OR10P1Q8NGE3 313 aa1.55□□□□□ -2.16
RNU4-53P-201ENST00000410828 OR51S1Q8NGJ8 323 aa1.55□□□□□ -2.16
RNU4-53P-201ENST00000410828 C15orf40Q8WUR7 153 aa1.55□□□□□ -2.16
RNU4-53P-201ENST00000410828 BAALCQ8WXS3 180 aa1.55□□□□□ -2.16
RNU4-53P-201ENST00000410828 RASL10AQ92737 203 aa1.55□□□□□ -2.16
RNU4-53P-201ENST00000410828 RMI2Q96E14 147 aa1.55□□□□□ -2.16
RNU4-53P-201ENST00000410828 DAZAP1Q96EP5 407 aaKnown RBP1.55□□□□□ -2.16
RNU4-53P-201ENST00000410828 ZNF479Q96JC4 524 aa1.55□□□□□ -2.16
RNU4-53P-201ENST00000410828 CNBD2Q96M20 576 aa1.55□□□□□ -2.16
RNU4-53P-201ENST00000410828 RTBDNQ9BSG5 229 aaPredicted RBP1.55□□□□□ -2.16
RNU4-53P-201ENST00000410828 PAXXQ9BUH6 204 aa1.55□□□□□ -2.16
RNU4-53P-201ENST00000410828 SH3BGRL3Q9H299 93 aa1.55□□□□□ -2.16
RNU4-53P-201ENST00000410828 ARV1Q9H2C2 271 aa1.55□□□□□ -2.16
RNU4-53P-201ENST00000410828 COMMD3Q9UBI1 195 aa1.55□□□□□ -2.16
RNU4-53P-201ENST00000410828 MTFP1Q9UDX5 166 aa1.55□□□□□ -2.16
RNU4-53P-201ENST00000410828 GPR132Q9UNW8 380 aa1.55□□□□□ -2.16
RNU4-53P-201ENST00000410828 PXMP4Q9Y6I8 212 aa1.55□□□□□ -2.16
RNU4-53P-201ENST00000410828 TNXBP22105 4242 aa1.54□□□□□ -2.16
RNU4-53P-201ENST00000410828 IGHV1OR15-1A0A075B7D0 117 aa1.54□□□□□ -2.16
RNU4-53P-201ENST00000410828 TRAV8-1A0A0A6YYK1 113 aa1.54□□□□□ -2.16
RNU4-53P-201ENST00000410828 TRAV4A0A0B4J268 109 aa1.54□□□□□ -2.16
RNU4-53P-201ENST00000410828 A0A0D9SG52 128 aa1.54□□□□□ -2.16
RNU4-53P-201ENST00000410828 FAM25AB3EWG3 89 aa1.54□□□□□ -2.16
RNU4-53P-201ENST00000410828 FAM25CB3EWG5 89 aa1.54□□□□□ -2.16
RNU4-53P-201ENST00000410828 FAM25GB3EWG6 89 aa1.54□□□□□ -2.16
RNU4-53P-201ENST00000410828 GGTLC3B5MD39 225 aa1.54□□□□□ -2.16
RNU4-53P-201ENST00000410828 DISC1C4P0D8 188 aa1.54□□□□□ -2.16
RNU4-53P-201ENST00000410828 PRSS46E5RG02 174 aa1.54□□□□□ -2.16
RNU4-53P-201ENST00000410828 H3BTX0 84 aa1.54□□□□□ -2.16
RNU4-53P-201ENST00000410828 WRBO00258 174 aa1.54□□□□□ -2.16
RNU4-53P-201ENST00000410828 SLC17A3O00476 420 aa1.54□□□□□ -2.16
RNU4-53P-201ENST00000410828 GOSR2O14653 212 aa1.54□□□□□ -2.16
RNU4-53P-201ENST00000410828 SYNGR2O43760 224 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms