RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 TMEM218A2RU14 115 aa12.62□□□□□ -0.39
SSB-202ENST00000409333 K7EQG2 157 aa12.62□□□□□ -0.39
SSB-202ENST00000409333 PEX7O00628 323 aa12.62□□□□□ -0.39
SSB-202ENST00000409333 ISLRO14498 428 aa12.62□□□□□ -0.39
SSB-202ENST00000409333 TCRAP04437 139 aa12.62□□□□□ -0.39
SSB-202ENST00000409333 C11orf52Q96A22 123 aa12.62□□□□□ -0.39
SSB-202ENST00000409333 RPUSD4Q96CM3 377 aaKnown RBP12.62□□□□□ -0.39
SSB-202ENST00000409333 AGRNO00468 2067 aa12.62□□□□□ -0.39
SSB-202ENST00000409333 NDUFS6O75380 124 aaKnown RBP12.61□□□□□ -0.39
SSB-202ENST00000409333 CD33P20138 364 aa12.61□□□□□ -0.39
SSB-202ENST00000409333 PAFAH1B2P68402 229 aa12.61□□□□□ -0.39
SSB-202ENST00000409333 LINC00052Q96N35 136 aa12.61□□□□□ -0.39
SSB-202ENST00000409333 TCEAL7Q9BRU2 100 aa12.61□□□□□ -0.39
SSB-202ENST00000409333 DIRC3C9JPN6 131 aa12.61□□□□□ -0.39
SSB-202ENST00000409333 PRAC2D3DTV9 90 aa12.61□□□□□ -0.39
SSB-202ENST00000409333 PSG3Q16557 428 aa12.61□□□□□ -0.39
SSB-202ENST00000409333 LCN12Q6JVE5 192 aa12.61□□□□□ -0.39
SSB-202ENST00000409333 C2CD4CQ8TF44 421 aa12.61□□□□□ -0.39
SSB-202ENST00000409333 HIST1H2BAQ96A08 127 aa12.61□□□□□ -0.39
SSB-202ENST00000409333 LINC00479Q96M42 142 aa12.61□□□□□ -0.39
SSB-202ENST00000409333 ATG101Q9BSB4 218 aa12.61□□□□□ -0.39
SSB-202ENST00000409333 PARLQ9H300 379 aa12.61□□□□□ -0.39
SSB-202ENST00000409333 TRAV25A0A0B4J276 109 aa12.6□□□□□ -0.39
SSB-202ENST00000409333 ZNF688P0C7X2 276 aa12.6□□□□□ -0.39
SSB-202ENST00000409333 ZNF674Q2M3X9 581 aa12.6□□□□□ -0.39
SSB-202ENST00000409333 SAMD13Q5VXD3 122 aa12.6□□□□□ -0.39
SSB-202ENST00000409333 GOLT1AQ6ZVE7 132 aa12.6□□□□□ -0.39
SSB-202ENST00000409333 IGKV2-40A0A087WW87 121 aaPredicted RBP12.59□□□□□ -0.39
SSB-202ENST00000409333 TRAV34A0A0B4J273 112 aa12.59□□□□□ -0.39
SSB-202ENST00000409333 IGKV2D-40P01614 121 aaPredicted RBP12.59□□□□□ -0.39
SSB-202ENST00000409333 ID1P41134 155 aa12.59□□□□□ -0.39
SSB-202ENST00000409333 CSN1S1P47710 185 aa12.59□□□□□ -0.39
SSB-202ENST00000409333 DEFB1P60022 68 aa12.59□□□□□ -0.39
SSB-202ENST00000409333 GUCA2BQ16661 112 aa12.59□□□□□ -0.39
SSB-202ENST00000409333 SOHLH1Q5JUK2 328 aa12.59□□□□□ -0.39
SSB-202ENST00000409333 WFDC9Q8NEX5 89 aa12.59□□□□□ -0.39
SSB-202ENST00000409333 SGK494Q96LW2 274 aa12.59□□□□□ -0.39
SSB-202ENST00000409333 SPAG8Q99932 426 aaPredicted RBP12.59□□□□□ -0.39
SSB-202ENST00000409333 PRELID1Q9Y255 219 aa12.59□□□□□ -0.39
SSB-202ENST00000409333 ZNF256Q9Y2P7 627 aaPredicted RBP12.59□□□□□ -0.39
SSB-202ENST00000409333 F8W036 122 aa12.58□□□□□ -0.39
SSB-202ENST00000409333 AKR1C3P42330 323 aa12.58□□□□□ -0.39
SSB-202ENST00000409333 RPL35P42766 123 aaKnown RBP12.58□□□□□ -0.39
SSB-202ENST00000409333 C9orf66Q5T8R8 295 aa12.58□□□□□ -0.39
SSB-202ENST00000409333 ZNF738Q8NE65 137 aa12.58□□□□□ -0.39
SSB-202ENST00000409333 MRPL53Q96EL3 112 aaKnown RBP12.58□□□□□ -0.39
SSB-202ENST00000409333 CLEC5AQ9NY25 188 aa12.58□□□□□ -0.39
SSB-202ENST00000409333 TRAV8-1A0A0A6YYK1 113 aa12.58□□□□□ -0.4
SSB-202ENST00000409333 TRAV2A0A0B4J234 112 aa12.58□□□□□ -0.4
SSB-202ENST00000409333 PSMG4Q5JS54 123 aa12.58□□□□□ -0.4
SSB-202ENST00000409333 IGLL1P15814 213 aa12.57□□□□□ -0.4
SSB-202ENST00000409333 CNN1P51911 297 aaKnown RBP12.57□□□□□ -0.4
SSB-202ENST00000409333 SNRPD3P62318 126 aaKnown RBP12.57□□□□□ -0.4
SSB-202ENST00000409333 OR2K2Q8NGT1 345 aa12.57□□□□□ -0.4
SSB-202ENST00000409333 SMIM7Q9BQ49 75 aa12.57□□□□□ -0.4
SSB-202ENST00000409333 SEC11CQ9BY50 192 aa12.57□□□□□ -0.4
SSB-202ENST00000409333 PKD1L1Q8TDX9 2849 aa12.57□□□□□ -0.4
SSB-202ENST00000409333 TRBV20OR9-2A0A075B6H5 130 aa12.56□□□□□ -0.4
SSB-202ENST00000409333 OR4C46A6NHA9 309 aa12.56□□□□□ -0.4
SSB-202ENST00000409333 ZNF727A8MUV8 499 aa12.56□□□□□ -0.4
SSB-202ENST00000409333 KRBOX1C9JBD0 128 aa12.56□□□□□ -0.4
SSB-202ENST00000409333 F6UB75 175 aa12.56□□□□□ -0.4
SSB-202ENST00000409333 INSL3P51460 131 aa12.56□□□□□ -0.4
SSB-202ENST00000409333 ARL6IP6Q8N6S5 226 aa12.56□□□□□ -0.4
SSB-202ENST00000409333 VGLL1Q99990 258 aa12.56□□□□□ -0.4
SSB-202ENST00000409333 IGLV2-11P01706 119 aa12.56□□□□□ -0.4
SSB-202ENST00000409333 ZNF705DP0CH99 300 aaPredicted RBP12.56□□□□□ -0.4
SSB-202ENST00000409333 ZNF705BP0CI00 300 aaPredicted RBP12.56□□□□□ -0.4
SSB-202ENST00000409333 RIPPLY3P57055 190 aa12.56□□□□□ -0.4
SSB-202ENST00000409333 C10orf91Q5T1B1 145 aa12.56□□□□□ -0.4
SSB-202ENST00000409333 ASCL2Q99929 193 aa12.56□□□□□ -0.4
SSB-202ENST00000409333 MCRIP2Q9BUT9 160 aaKnown RBP12.56□□□□□ -0.4
SSB-202ENST00000409333 KLF12Q9Y4X4 402 aa12.56□□□□□ -0.4
SSB-202ENST00000409333 PGPEP1LA6NFU8 196 aa12.55□□□□□ -0.4
SSB-202ENST00000409333 UBE2G1P62253 170 aa12.55□□□□□ -0.4
SSB-202ENST00000409333 TMEM183BQ1AE95 376 aa12.55□□□□□ -0.4
SSB-202ENST00000409333 TMEM75Q8N9X5 138 aa12.55□□□□□ -0.4
SSB-202ENST00000409333 K7EQM0 130 aa12.54□□□□□ -0.4
SSB-202ENST00000409333 ERCC8Q13216 396 aa12.54□□□□□ -0.4
SSB-202ENST00000409333 CENPWQ5EE01 88 aa12.54□□□□□ -0.4
SSB-202ENST00000409333 GDF5OSQ5U4N7 250 aa12.54□□□□□ -0.4
SSB-202ENST00000409333 FMC1Q96HJ9 113 aa12.54□□□□□ -0.4
SSB-202ENST00000409333 IGF2BP2-AS1Q96M15 143 aa12.54□□□□□ -0.4
SSB-202ENST00000409333 MAP6D1Q9H9H5 199 aa12.54□□□□□ -0.4
SSB-202ENST00000409333 SERTM2A0A1B0GWG4 89 aa12.53□□□□□ -0.4
SSB-202ENST00000409333 DEFB131AP59861 70 aa12.53□□□□□ -0.4
SSB-202ENST00000409333 ZNF124Q15973 351 aa12.53□□□□□ -0.4
SSB-202ENST00000409333 ODF3L2Q3SX64 289 aa12.53□□□□□ -0.4
SSB-202ENST00000409333 FAM74A3Q4VXF1 159 aa12.53□□□□□ -0.4
SSB-202ENST00000409333 PRNTQ86SH4 94 aa12.53□□□□□ -0.4
SSB-202ENST00000409333 Q86TA4 180 aa12.53□□□□□ -0.4
SSB-202ENST00000409333 Q8TAT8 98 aa12.53□□□□□ -0.4
SSB-202ENST00000409333 CARHSP1Q9Y2V2 147 aaKnown RBP12.53□□□□□ -0.4
SSB-202ENST00000409333 RBAKDNA6NC62 111 aa12.53□□□□□ -0.4
SSB-202ENST00000409333 TAS2R60P59551 318 aa12.53□□□□□ -0.4
SSB-202ENST00000409333 FLI1Q01543 452 aaPredicted RBP12.53□□□□□ -0.4
SSB-202ENST00000409333 NHLRC2Q8NBF2 726 aa12.53□□□□□ -0.4
SSB-202ENST00000409333 OR8A1Q8NGG7 326 aa12.53□□□□□ -0.4
SSB-202ENST00000409333 NIPSNAP3BQ9BS92 247 aa12.53□□□□□ -0.4
SSB-202ENST00000409333 PSG8Q9UQ74 426 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms