RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 HBG2P69892 147 aa13.64□□□□□ -0.23
SMARCB1-204ENST00000407422 TMEM88Q6PEY1 159 aa13.64□□□□□ -0.23
SMARCB1-204ENST00000407422 OR1L4Q8NGR5 311 aa13.64□□□□□ -0.23
SMARCB1-204ENST00000407422 GPN1Q9HCN4 374 aaPredicted RBP13.64□□□□□ -0.23
SMARCB1-204ENST00000407422 PKHD1P08F94 4074 aa13.63□□□□□ -0.23
SMARCB1-204ENST00000407422 LYRM9A8MSI8 78 aa13.63□□□□□ -0.23
SMARCB1-204ENST00000407422 DEFB130BP0DP73 79 aa13.63□□□□□ -0.23
SMARCB1-204ENST00000407422 DEFB130AP0DP74 79 aa13.63□□□□□ -0.23
SMARCB1-204ENST00000407422 FGF7P21781 194 aa13.63□□□□□ -0.23
SMARCB1-204ENST00000407422 TMEM256Q8N2U0 113 aa13.63□□□□□ -0.23
SMARCB1-204ENST00000407422 ZNF586Q9NXT0 402 aa13.63□□□□□ -0.23
SMARCB1-204ENST00000407422 PXMP4Q9Y6I8 212 aa13.63□□□□□ -0.23
SMARCB1-204ENST00000407422 NACAE9PAV3 2078 aa13.62□□□□□ -0.23
SMARCB1-204ENST00000407422 M0R2N4 97 aa13.62□□□□□ -0.23
SMARCB1-204ENST00000407422 TAS2R60P59551 318 aa13.62□□□□□ -0.23
SMARCB1-204ENST00000407422 NHLH2Q02577 135 aa13.62□□□□□ -0.23
SMARCB1-204ENST00000407422 PFDN5Q99471 154 aa13.62□□□□□ -0.23
SMARCB1-204ENST00000407422 ATP6V1FQ16864 119 aa13.61□□□□□ -0.23
SMARCB1-204ENST00000407422 OR10J6PQ8NGY7 276 aa13.61□□□□□ -0.23
SMARCB1-204ENST00000407422 CHAC2Q8WUX2 184 aa13.61□□□□□ -0.23
SMARCB1-204ENST00000407422 GCSAMLQ5JQS6 135 aa13.61□□□□□ -0.23
SMARCB1-204ENST00000407422 OR5AC2Q9NZP5 309 aa13.61□□□□□ -0.23
SMARCB1-204ENST00000407422 S100A1P23297 94 aa13.6□□□□□ -0.23
SMARCB1-204ENST00000407422 GUK1Q16774 197 aa13.6□□□□□ -0.23
SMARCB1-204ENST00000407422 LRRC37A5PQ49AS3 106 aa13.6□□□□□ -0.23
SMARCB1-204ENST00000407422 UBE2DNLQ8IWF7 75 aa13.6□□□□□ -0.23
SMARCB1-204ENST00000407422 THAP6Q8TBB0 222 aa13.6□□□□□ -0.23
SMARCB1-204ENST00000407422 ARPC5LQ9BPX5 153 aa13.6□□□□□ -0.23
SMARCB1-204ENST00000407422 NPCDR1Q9BY65 106 aa13.6□□□□□ -0.23
SMARCB1-204ENST00000407422 hCG_2014768A0A024R1R8 64 aa13.59□□□□□ -0.23
SMARCB1-204ENST00000407422 H0YIZ8 118 aa13.59□□□□□ -0.23
SMARCB1-204ENST00000407422 CT45A10P0DMU9 189 aa13.59□□□□□ -0.23
SMARCB1-204ENST00000407422 GFI1BQ5VTD9 330 aa13.59□□□□□ -0.23
SMARCB1-204ENST00000407422 OR5C1Q8NGR4 320 aa13.59□□□□□ -0.23
SMARCB1-204ENST00000407422 C16orf74Q96GX8 76 aa13.59□□□□□ -0.23
SMARCB1-204ENST00000407422 PKD1P98161 4303 aa13.59□□□□□ -0.23
SMARCB1-204ENST00000407422 INMT-MINDY4F8WBC2 141 aa13.58□□□□□ -0.24
SMARCB1-204ENST00000407422 RNASE8Q8TDE3 154 aaKnown RBP13.58□□□□□ -0.24
SMARCB1-204ENST00000407422 NMES1Q9C002 83 aa13.58□□□□□ -0.24
SMARCB1-204ENST00000407422 HERC2O95714 4834 aa13.58□□□□□ -0.24
SMARCB1-204ENST00000407422 IGLV2-18A0A075B6J9 118 aa13.57□□□□□ -0.24
SMARCB1-204ENST00000407422 TRBV19A0A075B6N1 114 aa13.57□□□□□ -0.24
SMARCB1-204ENST00000407422 H7BYZ3 331 aa13.57□□□□□ -0.24
SMARCB1-204ENST00000407422 J3KRW8 73 aa13.57□□□□□ -0.24
SMARCB1-204ENST00000407422 M0R3E3 92 aa13.57□□□□□ -0.24
SMARCB1-204ENST00000407422 MPDU1O75352 247 aa13.57□□□□□ -0.24
SMARCB1-204ENST00000407422 PYYP10082 97 aa13.57□□□□□ -0.24
SMARCB1-204ENST00000407422 E5RGE8 158 aa13.57□□□□□ -0.24
SMARCB1-204ENST00000407422 NPIPB6E9PJ23 425 aa13.57□□□□□ -0.24
SMARCB1-204ENST00000407422 F5H768 121 aa13.57□□□□□ -0.24
SMARCB1-204ENST00000407422 ZNF253O75346 499 aa13.57□□□□□ -0.24
SMARCB1-204ENST00000407422 NDUFB4O95168 129 aa13.57□□□□□ -0.24
SMARCB1-204ENST00000407422 RLN2P04090 185 aa13.57□□□□□ -0.24
SMARCB1-204ENST00000407422 H2BFSP57053 126 aa13.57□□□□□ -0.24
SMARCB1-204ENST00000407422 CLINT1Q14677 625 aa13.57□□□□□ -0.24
SMARCB1-204ENST00000407422 TMEM263Q8WUH6 116 aaKnown RBP13.57□□□□□ -0.24
SMARCB1-204ENST00000407422 NOP10Q9NPE3 64 aaKnown RBP13.57□□□□□ -0.24
SMARCB1-204ENST00000407422 TMEM14CQ9P0S9 112 aa13.57□□□□□ -0.24
SMARCB1-204ENST00000407422 TIMM8BQ9Y5J9 83 aaPredicted RBP13.57□□□□□ -0.24
SMARCB1-204ENST00000407422 PRAF2O60831 178 aa13.56□□□□□ -0.24
SMARCB1-204ENST00000407422 ZNF493Q6ZR52 646 aa13.56□□□□□ -0.24
SMARCB1-204ENST00000407422 C20orf144Q9BQM9 153 aa13.56□□□□□ -0.24
SMARCB1-204ENST00000407422 SLC25A31Q9H0C2 315 aa13.56□□□□□ -0.24
SMARCB1-204ENST00000407422 KIAA1109Q2LD37 5005 aa13.55□□□□□ -0.24
SMARCB1-204ENST00000407422 CBY3A6NI87 242 aa13.55□□□□□ -0.24
SMARCB1-204ENST00000407422 RTL8CO15255 209 aa13.55□□□□□ -0.24
SMARCB1-204ENST00000407422 HIST1H1EP10412 219 aaKnown RBP13.55□□□□□ -0.24
SMARCB1-204ENST00000407422 ERCC8Q13216 396 aa13.55□□□□□ -0.24
SMARCB1-204ENST00000407422 LGALS9BQ3B8N2 356 aa13.55□□□□□ -0.24
SMARCB1-204ENST00000407422 RNF212Q495C1 297 aa13.55□□□□□ -0.24
SMARCB1-204ENST00000407422 LINC00336Q6ZUF6 198 aa13.55□□□□□ -0.24
SMARCB1-204ENST00000407422 BLNKQ8WV28 456 aa13.55□□□□□ -0.24
SMARCB1-204ENST00000407422 MARVELD1Q9BSK0 173 aa13.55□□□□□ -0.24
SMARCB1-204ENST00000407422 SLC25A2Q9BXI2 301 aa13.55□□□□□ -0.24
SMARCB1-204ENST00000407422 TRAV12-3A0A0B4J271 114 aa13.54□□□□□ -0.24
SMARCB1-204ENST00000407422 ATP5G1P05496 136 aa13.54□□□□□ -0.24
SMARCB1-204ENST00000407422 ATP5G3P48201 142 aa13.54□□□□□ -0.24
SMARCB1-204ENST00000407422 MIR17HGQ75NE6 70 aa13.54□□□□□ -0.24
SMARCB1-204ENST00000407422 EXOC3-AS1Q8N2X6 119 aa13.54□□□□□ -0.24
SMARCB1-204ENST00000407422 C15orf53Q8NAA6 179 aa13.54□□□□□ -0.24
SMARCB1-204ENST00000407422 FAM167A-AS1Q96KT0 104 aa13.54□□□□□ -0.24
SMARCB1-204ENST00000407422 ODF3Q96PU9 254 aa13.54□□□□□ -0.24
SMARCB1-204ENST00000407422 TIMM9Q9Y5J7 89 aa13.54□□□□□ -0.24
SMARCB1-204ENST00000407422 LEPP41159 167 aa13.53□□□□□ -0.24
SMARCB1-204ENST00000407422 CYCSP99999 105 aaKnown RBP13.53□□□□□ -0.24
SMARCB1-204ENST00000407422 Q6ZR54 194 aa13.53□□□□□ -0.24
SMARCB1-204ENST00000407422 PPP1R1CQ8WVI7 109 aa13.53□□□□□ -0.24
SMARCB1-204ENST00000407422 MRPL53Q96EL3 112 aaKnown RBP13.53□□□□□ -0.24
SMARCB1-204ENST00000407422 WDR61Q9GZS3 305 aaKnown RBP13.53□□□□□ -0.24
SMARCB1-204ENST00000407422 PDE6HQ13956 83 aa13.52□□□□□ -0.25
SMARCB1-204ENST00000407422 NDUFA5Q16718 116 aa13.52□□□□□ -0.25
SMARCB1-204ENST00000407422 CCDC28AQ8IWP9 274 aa13.52□□□□□ -0.25
SMARCB1-204ENST00000407422 IQCF2Q8IXL9 164 aa13.52□□□□□ -0.25
SMARCB1-204ENST00000407422 A0A1B0GVY2 172 aa13.51□□□□□ -0.25
SMARCB1-204ENST00000407422 NUDT3O95989 172 aa13.51□□□□□ -0.25
SMARCB1-204ENST00000407422 AGPAT4-IT1Q9H0P7 198 aa13.51□□□□□ -0.25
SMARCB1-204ENST00000407422 PRSS29PA6NIE9 313 aa13.5□□□□□ -0.25
SMARCB1-204ENST00000407422 SSNA1O43805 119 aa13.5□□□□□ -0.25
SMARCB1-204ENST00000407422 ICAM4Q14773 271 aa13.5□□□□□ -0.25
SMARCB1-204ENST00000407422 PRELID1Q9Y255 219 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms