RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 SLC39A9Q9NUM3 307 aa4.13□□□□□ -1.75
HMGB1P20-201ENST00000402555 APLNQ9ULZ1 77 aa4.13□□□□□ -1.75
HMGB1P20-201ENST00000402555 GOLT1BQ9Y3E0 138 aa4.13□□□□□ -1.75
HMGB1P20-201ENST00000402555 PXMP4Q9Y6I8 212 aa4.13□□□□□ -1.75
HMGB1P20-201ENST00000402555 IGHV4-4A0A075B6R2 117 aa4.12□□□□□ -1.75
HMGB1P20-201ENST00000402555 DEFB131BA0A096LNP1 70 aa4.12□□□□□ -1.75
HMGB1P20-201ENST00000402555 TRAV10A0A0B4J240 114 aa4.12□□□□□ -1.75
HMGB1P20-201ENST00000402555 LOC102723971A0A1B0GUV8 181 aa4.12□□□□□ -1.75
HMGB1P20-201ENST00000402555 ZNF705GA8MUZ8 300 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P20-201ENST00000402555 PRAC2D3DTV9 90 aa4.12□□□□□ -1.75
HMGB1P20-201ENST00000402555 E5RGE8 158 aa4.12□□□□□ -1.75
HMGB1P20-201ENST00000402555 BOLA2-SMG1P6H3BVE0 249 aa4.12□□□□□ -1.75
HMGB1P20-201ENST00000402555 CRXO43186 299 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P20-201ENST00000402555 SSNA1O43805 119 aa4.12□□□□□ -1.75
HMGB1P20-201ENST00000402555 DUSP14O95147 198 aaKnown RBP4.12□□□□□ -1.75
HMGB1P20-201ENST00000402555 INSP01308 110 aa4.12□□□□□ -1.75
HMGB1P20-201ENST00000402555 HBE1P02100 147 aa4.12□□□□□ -1.75
HMGB1P20-201ENST00000402555 RPL29P47914 159 aaKnown RBP4.12□□□□□ -1.75
HMGB1P20-201ENST00000402555 DEFA1P59665 94 aa4.12□□□□□ -1.75
HMGB1P20-201ENST00000402555 DEFA3P59666 94 aa4.12□□□□□ -1.75
HMGB1P20-201ENST00000402555 B2MP61769 119 aa4.12□□□□□ -1.75
HMGB1P20-201ENST00000402555 RHOBP62745 196 aa4.12□□□□□ -1.75
HMGB1P20-201ENST00000402555 HBG1P69891 147 aa4.12□□□□□ -1.75
HMGB1P20-201ENST00000402555 HBG2P69892 147 aa4.12□□□□□ -1.75
HMGB1P20-201ENST00000402555 RAB31Q13636 194 aa4.12□□□□□ -1.75
HMGB1P20-201ENST00000402555 ANKRD39Q53RE8 183 aa4.12□□□□□ -1.75
HMGB1P20-201ENST00000402555 FAM222AQ5U5X8 452 aa4.12□□□□□ -1.75
HMGB1P20-201ENST00000402555 LCN15Q6UWW0 184 aa4.12□□□□□ -1.75
HMGB1P20-201ENST00000402555 Q6ZRG5 221 aa4.12□□□□□ -1.75
HMGB1P20-201ENST00000402555 S100A7AQ86SG5 101 aa4.12□□□□□ -1.75
HMGB1P20-201ENST00000402555 BPIFA4PQ86YQ2 179 aa4.12□□□□□ -1.75
HMGB1P20-201ENST00000402555 SYT8Q8NBV8 401 aa4.12□□□□□ -1.75
HMGB1P20-201ENST00000402555 OR5C1Q8NGR4 320 aa4.12□□□□□ -1.75
HMGB1P20-201ENST00000402555 PPP1R1CQ8WVI7 109 aa4.12□□□□□ -1.75
HMGB1P20-201ENST00000402555 RPUSD4Q96CM3 377 aaKnown RBP4.12□□□□□ -1.75
HMGB1P20-201ENST00000402555 IGF2BP2-AS1Q96M15 143 aa4.12□□□□□ -1.75
HMGB1P20-201ENST00000402555 NEU1Q99519 415 aa4.12□□□□□ -1.75
HMGB1P20-201ENST00000402555 TMEM208Q9BTX3 173 aa4.12□□□□□ -1.75
HMGB1P20-201ENST00000402555 NMES1Q9C002 83 aa4.12□□□□□ -1.75
HMGB1P20-201ENST00000402555 DNAJC4Q9NNZ3 241 aa4.12□□□□□ -1.75
HMGB1P20-201ENST00000402555 ZNF331Q9NQX6 463 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P20-201ENST00000402555 BATF3Q9NR55 127 aa4.12□□□□□ -1.75
HMGB1P20-201ENST00000402555 YTHDF2Q9Y5A9 579 aaKnown RBP4.12□□□□□ -1.75
HMGB1P20-201ENST00000402555 RFNGQ9Y644 331 aa4.12□□□□□ -1.75
HMGB1P20-201ENST00000402555 DNAH6Q9C0G6 4158 aa4.12□□□□□ -1.75
HMGB1P20-201ENST00000402555 FRAS1Q86XX4 4008 aa4.11□□□□□ -1.75
HMGB1P20-201ENST00000402555 SMIM9A6NGZ8 99 aa4.11□□□□□ -1.75
HMGB1P20-201ENST00000402555 C11orf94C9JXX5 98 aa4.11□□□□□ -1.75
HMGB1P20-201ENST00000402555 J3KRW8 73 aa4.11□□□□□ -1.75
HMGB1P20-201ENST00000402555 RLN2P04090 185 aa4.11□□□□□ -1.75
HMGB1P20-201ENST00000402555 SPART-AS1P0CW21 52 aa4.11□□□□□ -1.75
HMGB1P20-201ENST00000402555 IGLC2P0DOY2 106 aa4.11□□□□□ -1.75
HMGB1P20-201ENST00000402555 PYYP10082 97 aa4.11□□□□□ -1.75
HMGB1P20-201ENST00000402555 HTN3P15516 51 aa4.11□□□□□ -1.75
HMGB1P20-201ENST00000402555 AZU1P20160 251 aa4.11□□□□□ -1.75
HMGB1P20-201ENST00000402555 ATP6V1FQ16864 119 aa4.11□□□□□ -1.75
HMGB1P20-201ENST00000402555 RRN3P1Q2M238 152 aa4.11□□□□□ -1.75
HMGB1P20-201ENST00000402555 LGALS9CQ6DKI2 356 aa4.11□□□□□ -1.75
HMGB1P20-201ENST00000402555 OR1L4Q8NGR5 311 aa4.11□□□□□ -1.75
HMGB1P20-201ENST00000402555 SAT2Q96F10 170 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P20-201ENST00000402555 PFDN5Q99471 154 aa4.11□□□□□ -1.75
HMGB1P20-201ENST00000402555 SLC50A1Q9BRV3 221 aa4.11□□□□□ -1.75
HMGB1P20-201ENST00000402555 RNF126Q9BV68 326 aa4.11□□□□□ -1.75
HMGB1P20-201ENST00000402555 NPCDR1Q9BY65 106 aa4.11□□□□□ -1.75
HMGB1P20-201ENST00000402555 SMIM3Q9BZL3 60 aa4.11□□□□□ -1.75
HMGB1P20-201ENST00000402555 SLC25A31Q9H0C2 315 aa4.11□□□□□ -1.75
HMGB1P20-201ENST00000402555 PPP1R14DQ9NXH3 145 aa4.11□□□□□ -1.75
HMGB1P20-201ENST00000402555 ZNF586Q9NXT0 402 aa4.11□□□□□ -1.75
HMGB1P20-201ENST00000402555 DKK2Q9UBU2 259 aa4.11□□□□□ -1.75
HMGB1P20-201ENST00000402555 ALG5Q9Y673 324 aa4.11□□□□□ -1.75
HMGB1P20-201ENST00000402555 TMEM189A5PLL7 270 aa4.1□□□□□ -1.75
HMGB1P20-201ENST00000402555 M0R3E3 92 aa4.1□□□□□ -1.75
HMGB1P20-201ENST00000402555 EIF3GO75821 320 aaKnown RBP eCLIP4.1□□□□□ -1.75
HMGB1P20-201ENST00000402555 MPC2O95563 127 aa4.1□□□□□ -1.75
HMGB1P20-201ENST00000402555 AMBPP02760 352 aa4.1□□□□□ -1.75
HMGB1P20-201ENST00000402555 HTN1P15515 57 aa4.1□□□□□ -1.75
HMGB1P20-201ENST00000402555 CXCL2P19875 107 aa4.1□□□□□ -1.75
HMGB1P20-201ENST00000402555 CYCSP99999 105 aaKnown RBP4.1□□□□□ -1.75
HMGB1P20-201ENST00000402555 ERCC8Q13216 396 aa4.1□□□□□ -1.75
HMGB1P20-201ENST00000402555 FCN2Q15485 313 aa4.1□□□□□ -1.75
HMGB1P20-201ENST00000402555 MIR17HGQ75NE6 70 aa4.1□□□□□ -1.75
HMGB1P20-201ENST00000402555 CHAC2Q8WUX2 184 aa4.1□□□□□ -1.75
HMGB1P20-201ENST00000402555 BLNKQ8WV28 456 aa4.1□□□□□ -1.75
HMGB1P20-201ENST00000402555 LINC01587Q99440 93 aa4.1□□□□□ -1.75
HMGB1P20-201ENST00000402555 NIPSNAP3BQ9BS92 247 aa4.1□□□□□ -1.75
HMGB1P20-201ENST00000402555 SLC25A2Q9BXI2 301 aa4.1□□□□□ -1.75
HMGB1P20-201ENST00000402555 WDR61Q9GZS3 305 aaKnown RBP4.1□□□□□ -1.75
HMGB1P20-201ENST00000402555 MBD2Q9UBB5 411 aa4.1□□□□□ -1.75
HMGB1P20-201ENST00000402555 RNF24Q9Y225 148 aa4.1□□□□□ -1.75
HMGB1P20-201ENST00000402555 TRBV19A0A075B6N1 114 aa4.09□□□□□ -1.75
HMGB1P20-201ENST00000402555 PLAC8L1A1L4L8 177 aa4.09□□□□□ -1.75
HMGB1P20-201ENST00000402555 MPDU1O75352 247 aa4.09□□□□□ -1.75
HMGB1P20-201ENST00000402555 NDUFB4O95168 129 aa4.09□□□□□ -1.75
HMGB1P20-201ENST00000402555 OR10J4P0C629 311 aa4.09□□□□□ -1.75
HMGB1P20-201ENST00000402555 CT45A10P0DMU9 189 aa4.09□□□□□ -1.75
HMGB1P20-201ENST00000402555 DEFB130BP0DP73 79 aa4.09□□□□□ -1.75
HMGB1P20-201ENST00000402555 DEFB130AP0DP74 79 aa4.09□□□□□ -1.75
HMGB1P20-201ENST00000402555 HIST1H1EP10412 219 aaKnown RBP4.09□□□□□ -1.75
HMGB1P20-201ENST00000402555 RPL12P30050 165 aaKnown RBP4.09□□□□□ -1.75
HMGB1P20-201ENST00000402555 CDKN1BP46527 198 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms