RNA–Protein interactions for RNA: ENST00000401605.5

CLIP4-202, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2 BASIC

Gene CLIP4, Length 2,322 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-202ENST00000401605 SMIM7Q9BQ49 75 aa4.9□□□□□ -1.63
CLIP4-202ENST00000401605 PYGO1Q9Y3Y4 419 aa4.9□□□□□ -1.63
CLIP4-202ENST00000401605 FLNAP21333 2647 aaKnown RBP4.89□□□□□ -1.63
CLIP4-202ENST00000401605 ARHGAP21Q5T5U3 1957 aa4.89□□□□□ -1.63
CLIP4-202ENST00000401605 A0A1W2PS18 150 aa4.89□□□□□ -1.63
CLIP4-202ENST00000401605 PRSS3P35030 304 aa4.89□□□□□ -1.63
CLIP4-202ENST00000401605 Q56UQ5 140 aa4.89□□□□□ -1.63
CLIP4-202ENST00000401605 BCDIN3DQ7Z5W3 292 aaKnown RBP4.89□□□□□ -1.63
CLIP4-202ENST00000401605 LRTM2Q8N967 370 aa4.89□□□□□ -1.63
CLIP4-202ENST00000401605 ZNF503Q96F45 646 aa4.89□□□□□ -1.63
CLIP4-202ENST00000401605 PRO0461Q9UI25 63 aa4.89□□□□□ -1.63
CLIP4-202ENST00000401605 EXPH5Q8NEV8 1989 aa4.89□□□□□ -1.63
CLIP4-202ENST00000401605 HRNRQ86YZ3 2850 aaPredicted RBP4.89□□□□□ -1.63
CLIP4-202ENST00000401605 CCL24O00175 119 aa4.89□□□□□ -1.63
CLIP4-202ENST00000401605 MRPL33O75394 65 aaKnown RBP4.89□□□□□ -1.63
CLIP4-202ENST00000401605 GATA1P15976 413 aaPredicted RBP4.89□□□□□ -1.63
CLIP4-202ENST00000401605 CBLN1P23435 193 aa4.89□□□□□ -1.63
CLIP4-202ENST00000401605 HILS1P60008 231 aa4.89□□□□□ -1.63
CLIP4-202ENST00000401605 RPL23P62829 140 aaKnown RBP4.89□□□□□ -1.63
CLIP4-202ENST00000401605 CCL20P78556 96 aa4.89□□□□□ -1.63
CLIP4-202ENST00000401605 KLF17Q5JT82 389 aaPredicted RBP4.89□□□□□ -1.63
CLIP4-202ENST00000401605 FAM27D1Q5T7N8 215 aa4.89□□□□□ -1.63
CLIP4-202ENST00000401605 C2orf91Q6ZV80 131 aa4.89□□□□□ -1.63
CLIP4-202ENST00000401605 TEX45Q8NA69 505 aa4.89□□□□□ -1.63
CLIP4-202ENST00000401605 THAP8Q8NA92 274 aa4.89□□□□□ -1.63
CLIP4-202ENST00000401605 ZNF442Q9H7R0 627 aa4.89□□□□□ -1.63
CLIP4-202ENST00000401605 HIVEP2P31629 2446 aa4.88□□□□□ -1.63
CLIP4-202ENST00000401605 C3orf85A0A1B0GTC6 90 aa4.88□□□□□ -1.63
CLIP4-202ENST00000401605 SHISA9B4DS77 424 aa4.88□□□□□ -1.63
CLIP4-202ENST00000401605 INAFM1C9JVW0 142 aa4.88□□□□□ -1.63
CLIP4-202ENST00000401605 CHEK1O14757 476 aa4.88□□□□□ -1.63
CLIP4-202ENST00000401605 SPINT2O43291 252 aa4.88□□□□□ -1.63
CLIP4-202ENST00000401605 IGHV3-9P01782 118 aa4.88□□□□□ -1.63
CLIP4-202ENST00000401605 RBP4P02753 201 aa4.88□□□□□ -1.63
CLIP4-202ENST00000401605 IGF1P05019 195 aa4.88□□□□□ -1.63
CLIP4-202ENST00000401605 CRYGAP11844 174 aa4.88□□□□□ -1.63
CLIP4-202ENST00000401605 RRN3P1Q2M238 152 aa4.88□□□□□ -1.63
CLIP4-202ENST00000401605 MRPL2Q5T653 305 aaKnown RBP4.88□□□□□ -1.63
CLIP4-202ENST00000401605 SLC25A48Q6ZT89 311 aaKnown RBP4.88□□□□□ -1.63
CLIP4-202ENST00000401605 HMGN2P46Q86SG4 172 aa4.88□□□□□ -1.63
CLIP4-202ENST00000401605 RPS4Y2Q8TD47 263 aa4.88□□□□□ -1.63
CLIP4-202ENST00000401605 MRPL24Q96A35 216 aaKnown RBP4.88□□□□□ -1.63
CLIP4-202ENST00000401605 MRPL20Q9BYC9 149 aaKnown RBP4.88□□□□□ -1.63
CLIP4-202ENST00000401605 SLC25A15Q9Y619 301 aa4.88□□□□□ -1.63
CLIP4-202ENST00000401605 DNHD1Q96M86 4753 aa4.88□□□□□ -1.63
CLIP4-202ENST00000401605 FREM3P0C091 2139 aa4.88□□□□□ -1.63
CLIP4-202ENST00000401605 MAP1AP78559 2803 aaPredicted RBP4.88□□□□□ -1.63
CLIP4-202ENST00000401605 NIPBLQ6KC79 2804 aaeCLIP4.88□□□□□ -1.63
CLIP4-202ENST00000401605 FN1P02751 2386 aaKnown RBP4.88□□□□□ -1.63
CLIP4-202ENST00000401605 FAM181BA6NEQ2 426 aa4.88□□□□□ -1.63
CLIP4-202ENST00000401605 LY6LH3BQJ8 138 aa4.88□□□□□ -1.63
CLIP4-202ENST00000401605 RRHO14718 337 aa4.88□□□□□ -1.63
CLIP4-202ENST00000401605 LMX1BO60663 402 aa4.88□□□□□ -1.63
CLIP4-202ENST00000401605 DUTP33316 252 aaKnown RBP4.88□□□□□ -1.63
CLIP4-202ENST00000401605 MRPL55Q7Z7F7 128 aaKnown RBP4.88□□□□□ -1.63
CLIP4-202ENST00000401605 ANKRD29Q8N6D5 301 aa4.88□□□□□ -1.63
CLIP4-202ENST00000401605 C3orf56Q8N813 242 aa4.88□□□□□ -1.63
CLIP4-202ENST00000401605 OR52N5Q8NH56 324 aa4.88□□□□□ -1.63
CLIP4-202ENST00000401605 DNAJA3Q96EY1 480 aa4.88□□□□□ -1.63
CLIP4-202ENST00000401605 TMEM147Q9BVK8 224 aa4.88□□□□□ -1.63
CLIP4-202ENST00000401605 Q9H8V8 135 aa4.88□□□□□ -1.63
CLIP4-202ENST00000401605 ZNF331Q9NQX6 463 aaPredicted RBP4.88□□□□□ -1.63
CLIP4-202ENST00000401605 OR2W1Q9Y3N9 320 aa4.88□□□□□ -1.63
CLIP4-202ENST00000401605 CSPG4Q6UVK1 2322 aa4.87□□□□□ -1.63
CLIP4-202ENST00000401605 TRGV11A0A075B6L2 103 aa4.87□□□□□ -1.63
CLIP4-202ENST00000401605 TRAV4A0A0B4J268 109 aa4.87□□□□□ -1.63
CLIP4-202ENST00000401605 E9PLD3 99 aa4.87□□□□□ -1.63
CLIP4-202ENST00000401605 C11orf98E9PRG8 122 aa4.87□□□□□ -1.63
CLIP4-202ENST00000401605 H7C1H1 209 aa4.87□□□□□ -1.63
CLIP4-202ENST00000401605 IGHV4-39P01824 125 aa4.87□□□□□ -1.63
CLIP4-202ENST00000401605 IGHG1P01857 330 aa4.87□□□□□ -1.63
CLIP4-202ENST00000401605 FOXA3P55318 350 aaPredicted RBP4.87□□□□□ -1.63
CLIP4-202ENST00000401605 TEN1Q86WV5 123 aa4.87□□□□□ -1.63
CLIP4-202ENST00000401605 HOGA1Q86XE5 327 aa4.87□□□□□ -1.63
CLIP4-202ENST00000401605 MED12LQ86YW9 2145 aa4.87□□□□□ -1.63
CLIP4-202ENST00000401605 LINC00479Q96M42 142 aa4.87□□□□□ -1.63
CLIP4-202ENST00000401605 SCGB3A2Q96PL1 93 aa4.87□□□□□ -1.63
CLIP4-202ENST00000401605 PDCD1LG2Q9BQ51 273 aa4.87□□□□□ -1.63
CLIP4-202ENST00000401605 GNB4Q9HAV0 340 aa4.87□□□□□ -1.63
CLIP4-202ENST00000401605 ROS1P08922 2347 aa4.87□□□□□ -1.63
CLIP4-202ENST00000401605 ARID1AO14497 2285 aa4.87□□□□□ -1.63
CLIP4-202ENST00000401605 USF3Q68DE3 2245 aa4.86□□□□□ -1.63
CLIP4-202ENST00000401605 TRBV5-7A0A0A0MS05 114 aa4.86□□□□□ -1.63
CLIP4-202ENST00000401605 LOC107986453A0A1B0GWG9 222 aa4.86□□□□□ -1.63
CLIP4-202ENST00000401605 E7EQL1 145 aa4.86□□□□□ -1.63
CLIP4-202ENST00000401605 H3BTX0 84 aa4.86□□□□□ -1.63
CLIP4-202ENST00000401605 M0R1B8 84 aa4.86□□□□□ -1.63
CLIP4-202ENST00000401605 NDUFB4O95168 129 aa4.86□□□□□ -1.63
CLIP4-202ENST00000401605 TRACP01848 142 aa4.86□□□□□ -1.63
CLIP4-202ENST00000401605 DSCR9P59020 149 aa4.86□□□□□ -1.63
CLIP4-202ENST00000401605 KRTAP1-1Q07627 177 aa4.86□□□□□ -1.63
CLIP4-202ENST00000401605 IL15RAQ13261 267 aa4.86□□□□□ -1.63
CLIP4-202ENST00000401605 MSMPQ1L6U9 139 aa4.86□□□□□ -1.63
CLIP4-202ENST00000401605 VKORC1L1Q8N0U8 176 aa4.86□□□□□ -1.63
CLIP4-202ENST00000401605 FBXL14Q8N1E6 418 aa4.86□□□□□ -1.63
CLIP4-202ENST00000401605 MAPK1IP1LQ8NDC0 245 aa4.86□□□□□ -1.63
CLIP4-202ENST00000401605 JMJD1CQ15652 2540 aa4.86□□□□□ -1.63
CLIP4-202ENST00000401605 NDUFS7O75251 213 aa4.86□□□□□ -1.63
CLIP4-202ENST00000401605 C11orf71Q6IPW1 123 aa4.86□□□□□ -1.63
CLIP4-202ENST00000401605 AAED1Q7RTV5 226 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms