RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 TMEM75Q8N9X5 138 aa12.47□□□□□ -0.41
CHRFAM7A-203ENST00000401522 NPBQ8NG41 125 aa12.47□□□□□ -0.41
CHRFAM7A-203ENST00000401522 IGHV1-69DA0A0B4J2H0 117 aa12.47□□□□□ -0.41
CHRFAM7A-203ENST00000401522 HAX1O00165 279 aa12.47□□□□□ -0.41
CHRFAM7A-203ENST00000401522 IGHV1-69P01742 117 aa12.47□□□□□ -0.41
CHRFAM7A-203ENST00000401522 ZNF25P17030 456 aaPredicted RBP12.47□□□□□ -0.41
CHRFAM7A-203ENST00000401522 G0S2P27469 103 aa12.47□□□□□ -0.41
CHRFAM7A-203ENST00000401522 EBLN2Q6P2I7 272 aa12.47□□□□□ -0.41
CHRFAM7A-203ENST00000401522 PRNTQ86SH4 94 aa12.47□□□□□ -0.41
CHRFAM7A-203ENST00000401522 SMR3AQ99954 134 aa12.47□□□□□ -0.41
CHRFAM7A-203ENST00000401522 ZFP30Q9Y2G7 519 aa12.47□□□□□ -0.41
CHRFAM7A-203ENST00000401522 TRAV8-1A0A0A6YYK1 113 aa12.46□□□□□ -0.42
CHRFAM7A-203ENST00000401522 TRAV40A0A0B4J280 105 aa12.46□□□□□ -0.42
CHRFAM7A-203ENST00000401522 K7EQM0 130 aa12.46□□□□□ -0.42
CHRFAM7A-203ENST00000401522 CHEK1O14757 476 aa12.46□□□□□ -0.42
CHRFAM7A-203ENST00000401522 PLXNB1O43157 2135 aa12.46□□□□□ -0.42
CHRFAM7A-203ENST00000401522 NDUFA3O95167 84 aa12.46□□□□□ -0.42
CHRFAM7A-203ENST00000401522 LY6G6DO95868 133 aa12.46□□□□□ -0.42
CHRFAM7A-203ENST00000401522 FSHBP01225 129 aa12.46□□□□□ -0.42
CHRFAM7A-203ENST00000401522 IGHV4-38-2P0DP08 117 aa12.46□□□□□ -0.42
CHRFAM7A-203ENST00000401522 ZNF124Q15973 351 aa12.46□□□□□ -0.42
CHRFAM7A-203ENST00000401522 COL5A1-AS1Q5SY13 56 aa12.46□□□□□ -0.42
CHRFAM7A-203ENST00000401522 LDLRAD2Q5SZI1 272 aa12.46□□□□□ -0.42
CHRFAM7A-203ENST00000401522 PIP4P2Q8N4L2 257 aa12.46□□□□□ -0.42
CHRFAM7A-203ENST00000401522 TEX29Q8N6K0 151 aa12.46□□□□□ -0.42
CHRFAM7A-203ENST00000401522 CFHR4Q92496 578 aa12.46□□□□□ -0.42
CHRFAM7A-203ENST00000401522 TXN2Q99757 166 aa12.46□□□□□ -0.42
CHRFAM7A-203ENST00000401522 YAE1D1Q9NRH1 226 aa12.46□□□□□ -0.42
CHRFAM7A-203ENST00000401522 HIVEP1P15822 2718 aa12.46□□□□□ -0.42
CHRFAM7A-203ENST00000401522 TRAV30A0A087WSZ9 112 aa12.45□□□□□ -0.42
CHRFAM7A-203ENST00000401522 TRAV9-2A0A087WT02 112 aa12.45□□□□□ -0.42
CHRFAM7A-203ENST00000401522 C2orf70A6NJV1 201 aa12.45□□□□□ -0.42
CHRFAM7A-203ENST00000401522 HLA-DRB1P01911 266 aa12.45□□□□□ -0.42
CHRFAM7A-203ENST00000401522 HNRNPA3P51991 378 aaKnown RBP12.45□□□□□ -0.42
CHRFAM7A-203ENST00000401522 FOXA3P55318 350 aaPredicted RBP12.45□□□□□ -0.42
CHRFAM7A-203ENST00000401522 MINOS1Q5TGZ0 78 aa12.45□□□□□ -0.42
CHRFAM7A-203ENST00000401522 DMRTA1Q5VZB9 504 aa12.45□□□□□ -0.42
CHRFAM7A-203ENST00000401522 LCN12Q6JVE5 192 aa12.45□□□□□ -0.42
CHRFAM7A-203ENST00000401522 Q6ZN92 141 aa12.45□□□□□ -0.42
CHRFAM7A-203ENST00000401522 RNF125Q96EQ8 232 aa12.45□□□□□ -0.42
CHRFAM7A-203ENST00000401522 URB1-AS1Q96HZ7 61 aa12.45□□□□□ -0.42
CHRFAM7A-203ENST00000401522 NDFIP1Q9BT67 221 aa12.45□□□□□ -0.42
CHRFAM7A-203ENST00000401522 TMEM160Q9NX00 188 aa12.45□□□□□ -0.42
CHRFAM7A-203ENST00000401522 MINOS1-NBL1R4GNA1 71 aa12.45□□□□□ -0.42
CHRFAM7A-203ENST00000401522 LOC102724200A0A096LPH7 203 aaPredicted RBP12.45□□□□□ -0.42
CHRFAM7A-203ENST00000401522 NPFFO15130 113 aa12.45□□□□□ -0.42
CHRFAM7A-203ENST00000401522 GAGE1Q13065 139 aa12.45□□□□□ -0.42
CHRFAM7A-203ENST00000401522 BATFQ16520 125 aa12.45□□□□□ -0.42
CHRFAM7A-203ENST00000401522 SIGLEC15Q6ZMC9 328 aa12.45□□□□□ -0.42
CHRFAM7A-203ENST00000401522 ZNF491Q8N8L2 437 aa12.45□□□□□ -0.42
CHRFAM7A-203ENST00000401522 C1RLQ9NZP8 487 aa12.45□□□□□ -0.42
CHRFAM7A-203ENST00000401522 TLN2Q9Y4G6 2542 aa12.44□□□□□ -0.42
CHRFAM7A-203ENST00000401522 A0A1W2PRD5 423 aa12.44□□□□□ -0.42
CHRFAM7A-203ENST00000401522 A0A1W2PRF3 423 aa12.44□□□□□ -0.42
CHRFAM7A-203ENST00000401522 A0A1W2PRM7 423 aa12.44□□□□□ -0.42
CHRFAM7A-203ENST00000401522 WI2-2373I1.2A0A1W2PRP0 233 aa12.44□□□□□ -0.42
CHRFAM7A-203ENST00000401522 APOHP02749 345 aaPredicted RBP12.44□□□□□ -0.42
CHRFAM7A-203ENST00000401522 SAA4P35542 130 aa12.44□□□□□ -0.42
CHRFAM7A-203ENST00000401522 FAM120AOSQ5T036 256 aa12.44□□□□□ -0.42
CHRFAM7A-203ENST00000401522 AJUBAQ96IF1 538 aa12.44□□□□□ -0.42
CHRFAM7A-203ENST00000401522 ZNF48Q96MX3 618 aaPredicted RBP12.44□□□□□ -0.42
CHRFAM7A-203ENST00000401522 TMEM70Q9BUB7 260 aa12.44□□□□□ -0.42
CHRFAM7A-203ENST00000401522 IGHV3OR16-10A0A075B7F0 116 aa12.43□□□□□ -0.42
CHRFAM7A-203ENST00000401522 Q56UQ5 140 aa12.43□□□□□ -0.42
CHRFAM7A-203ENST00000401522 ATOH7Q8N100 152 aa12.43□□□□□ -0.42
CHRFAM7A-203ENST00000401522 HILPDAQ9Y5L2 63 aa12.43□□□□□ -0.42
CHRFAM7A-203ENST00000401522 A0A1B0GW15 77 aa12.43□□□□□ -0.42
CHRFAM7A-203ENST00000401522 NPIPB5A8MRT5 1133 aa12.43□□□□□ -0.42
CHRFAM7A-203ENST00000401522 MRPS12O15235 138 aaKnown RBP12.43□□□□□ -0.42
CHRFAM7A-203ENST00000401522 IL4P05112 153 aa12.43□□□□□ -0.42
CHRFAM7A-203ENST00000401522 RIGQ13278 110 aa12.43□□□□□ -0.42
CHRFAM7A-203ENST00000401522 PSG3Q16557 428 aa12.43□□□□□ -0.42
CHRFAM7A-203ENST00000401522 C5orf64Q2M2E5 130 aa12.43□□□□□ -0.42
CHRFAM7A-203ENST00000401522 BRD3OSQ6XYD6 125 aa12.43□□□□□ -0.42
CHRFAM7A-203ENST00000401522 ZC2HC1AQ96GY0 325 aa12.43□□□□□ -0.42
CHRFAM7A-203ENST00000401522 TMEM208Q9BTX3 173 aa12.43□□□□□ -0.42
CHRFAM7A-203ENST00000401522 PSG8Q9UQ74 426 aa12.43□□□□□ -0.42
CHRFAM7A-203ENST00000401522 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.42□□□□□ -0.42
CHRFAM7A-203ENST00000401522 A0A1B0GUT8 65 aa12.42□□□□□ -0.42
CHRFAM7A-203ENST00000401522 CRXO43186 299 aaPredicted RBP12.42□□□□□ -0.42
CHRFAM7A-203ENST00000401522 DLEU1O43261 78 aa12.42□□□□□ -0.42
CHRFAM7A-203ENST00000401522 PDE6HQ13956 83 aa12.42□□□□□ -0.42
CHRFAM7A-203ENST00000401522 GATD1Q8NB37 220 aa12.42□□□□□ -0.42
CHRFAM7A-203ENST00000401522 ZNF414Q96IQ9 312 aa12.42□□□□□ -0.42
CHRFAM7A-203ENST00000401522 MRPS16Q9Y3D3 137 aaKnown RBP12.42□□□□□ -0.42
CHRFAM7A-203ENST00000401522 IGHV1-24A0A0C4DH33 117 aa12.41□□□□□ -0.42
CHRFAM7A-203ENST00000401522 ZNF785A8K8V0 405 aa12.41□□□□□ -0.42
CHRFAM7A-203ENST00000401522 OOSP1A8MZH6 123 aa12.41□□□□□ -0.42
CHRFAM7A-203ENST00000401522 GNG7O60262 68 aa12.41□□□□□ -0.42
CHRFAM7A-203ENST00000401522 OR5AL1P0C617 328 aa12.41□□□□□ -0.42
CHRFAM7A-203ENST00000401522 LINC00614P0C842 121 aa12.41□□□□□ -0.42
CHRFAM7A-203ENST00000401522 MFAP4P55083 255 aa12.41□□□□□ -0.42
CHRFAM7A-203ENST00000401522 Q6AWC8 147 aa12.41□□□□□ -0.42
CHRFAM7A-203ENST00000401522 C9orf139Q6ZV77 190 aa12.41□□□□□ -0.42
CHRFAM7A-203ENST00000401522 C17orf77Q96MU5 243 aa12.41□□□□□ -0.42
CHRFAM7A-203ENST00000401522 CLEC5AQ9NY25 188 aa12.41□□□□□ -0.42
CHRFAM7A-203ENST00000401522 LAMTOR2Q9Y2Q5 125 aa12.41□□□□□ -0.42
CHRFAM7A-203ENST00000401522 IGLV11-55A0A075B6I3 123 aa12.41□□□□□ -0.42
CHRFAM7A-203ENST00000401522 SH2D7A6NKC9 451 aaPredicted RBP12.41□□□□□ -0.42
CHRFAM7A-203ENST00000401522 FCGR2BP31994 310 aaPredicted RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms