RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 ZNF503Q96F45 646 aa8.93□□□□□ -0.98
CACNA1C-216ENST00000399638 PLA2G1BP04054 148 aaKnown RBP8.93□□□□□ -0.98
CACNA1C-216ENST00000399638 DNAJC30Q96LL9 226 aa8.93□□□□□ -0.98
CACNA1C-216ENST00000399638 IGHV2-70DA0A0C4DH43 119 aa8.93□□□□□ -0.98
CACNA1C-216ENST00000399638 DKK1O94907 266 aa8.93□□□□□ -0.98
CACNA1C-216ENST00000399638 CRYGCP07315 174 aa8.93□□□□□ -0.98
CACNA1C-216ENST00000399638 TIRAPP58753 221 aa8.93□□□□□ -0.98
CACNA1C-216ENST00000399638 IGHV4-59P01825 116 aa8.92□□□□□ -0.98
CACNA1C-216ENST00000399638 GPHB5Q86YW7 130 aa8.92□□□□□ -0.98
CACNA1C-216ENST00000399638 HIST1H2BKO60814 126 aa8.92□□□□□ -0.98
CACNA1C-216ENST00000399638 TBX6O95947 436 aaPredicted RBP8.92□□□□□ -0.98
CACNA1C-216ENST00000399638 HIST1H2BJP06899 126 aa8.92□□□□□ -0.98
CACNA1C-216ENST00000399638 HIST1H2BOP23527 126 aa8.92□□□□□ -0.98
CACNA1C-216ENST00000399638 HIST1H2BBP33778 126 aa8.92□□□□□ -0.98
CACNA1C-216ENST00000399638 HIST1H2BDP58876 126 aa8.92□□□□□ -0.98
CACNA1C-216ENST00000399638 HIST1H2BCP62807 126 aa8.92□□□□□ -0.98
CACNA1C-216ENST00000399638 HIST2H2BEQ16778 126 aa8.92□□□□□ -0.98
CACNA1C-216ENST00000399638 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.92□□□□□ -0.98
CACNA1C-216ENST00000399638 HIST1H2BHQ93079 126 aa8.92□□□□□ -0.98
CACNA1C-216ENST00000399638 HIST1H2BNQ99877 126 aa8.92□□□□□ -0.98
CACNA1C-216ENST00000399638 HIST1H2BMQ99879 126 aa8.92□□□□□ -0.98
CACNA1C-216ENST00000399638 WDR90Q96KV7 1748 aa8.92□□□□□ -0.98
CACNA1C-216ENST00000399638 PYYP10082 97 aa8.92□□□□□ -0.98
CACNA1C-216ENST00000399638 BRK1Q8WUW1 75 aa8.92□□□□□ -0.98
CACNA1C-216ENST00000399638 A0A1B0GUS0 222 aa8.92□□□□□ -0.98
CACNA1C-216ENST00000399638 C10orf55Q5SWW7 151 aa8.92□□□□□ -0.98
CACNA1C-216ENST00000399638 TMEM170AQ8WVE7 144 aa8.92□□□□□ -0.98
CACNA1C-216ENST00000399638 NRGNQ92686 78 aa8.92□□□□□ -0.98
CACNA1C-216ENST00000399638 A0A0J9YWU9 116 aa8.92□□□□□ -0.98
CACNA1C-216ENST00000399638 PRSS29PA6NIE9 313 aa8.92□□□□□ -0.98
CACNA1C-216ENST00000399638 TMEM238C9JI98 176 aa8.92□□□□□ -0.98
CACNA1C-216ENST00000399638 Q6AWC8 147 aa8.92□□□□□ -0.98
CACNA1C-216ENST00000399638 PRIMA1Q86XR5 153 aa8.92□□□□□ -0.98
CACNA1C-216ENST00000399638 RTBDNQ9BSG5 229 aaPredicted RBP8.92□□□□□ -0.98
CACNA1C-216ENST00000399638 IGKV1D-43A0A0B4J1Z2 117 aa8.91□□□□□ -0.98
CACNA1C-216ENST00000399638 IGHV2-5P01817 119 aa8.91□□□□□ -0.98
CACNA1C-216ENST00000399638 ADCYAP1P18509 176 aa8.91□□□□□ -0.98
CACNA1C-216ENST00000399638 FAM120AOSQ5T036 256 aa8.91□□□□□ -0.98
CACNA1C-216ENST00000399638 C9orf139Q6ZV77 190 aa8.91□□□□□ -0.98
CACNA1C-216ENST00000399638 PKDREJQ9NTG1 2253 aa8.91□□□□□ -0.98
CACNA1C-216ENST00000399638 TRPM7Q96QT4 1865 aa8.91□□□□□ -0.98
CACNA1C-216ENST00000399638 GAGE12HA6NDE8 117 aa8.91□□□□□ -0.98
CACNA1C-216ENST00000399638 SS18L2Q9UHA2 77 aa8.91□□□□□ -0.98
CACNA1C-216ENST00000399638 ZNF646O15015 1829 aaPredicted RBP8.91□□□□□ -0.98
CACNA1C-216ENST00000399638 TSC2P49815 1807 aa8.91□□□□□ -0.98
CACNA1C-216ENST00000399638 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.91□□□□□ -0.98
CACNA1C-216ENST00000399638 H0YIZ8 118 aa8.91□□□□□ -0.98
CACNA1C-216ENST00000399638 Q6ZQT7 251 aa8.91□□□□□ -0.98
CACNA1C-216ENST00000399638 PIKFYVEQ9Y2I7 2098 aa8.91□□□□□ -0.98
CACNA1C-216ENST00000399638 LHFPL1Q86WI0 220 aa8.91□□□□□ -0.98
CACNA1C-216ENST00000399638 RETNQ9HD89 108 aa8.91□□□□□ -0.98
CACNA1C-216ENST00000399638 PMS2P5A8MQ11 134 aa8.9□□□□□ -0.98
CACNA1C-216ENST00000399638 ATP6V0E1O15342 81 aa8.9□□□□□ -0.98
CACNA1C-216ENST00000399638 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.9□□□□□ -0.98
CACNA1C-216ENST00000399638 A0A087X0K7 114 aa8.9□□□□□ -0.98
CACNA1C-216ENST00000399638 SMKR1H3BMG3 65 aa8.9□□□□□ -0.98
CACNA1C-216ENST00000399638 IGKV1-5P01602 117 aa8.9□□□□□ -0.98
CACNA1C-216ENST00000399638 WBP1Q96G27 269 aa8.9□□□□□ -0.98
CACNA1C-216ENST00000399638 CHD5Q8TDI0 1954 aa8.9□□□□□ -0.98
CACNA1C-216ENST00000399638 PSG3Q16557 428 aa8.9□□□□□ -0.98
CACNA1C-216ENST00000399638 ANKRD29Q8N6D5 301 aa8.9□□□□□ -0.98
CACNA1C-216ENST00000399638 NDUFS6O75380 124 aaKnown RBP8.9□□□□□ -0.99
CACNA1C-216ENST00000399638 SRSF3P84103 164 aaKnown RBP8.9□□□□□ -0.99
CACNA1C-216ENST00000399638 DEFB112Q30KQ8 113 aa8.9□□□□□ -0.99
CACNA1C-216ENST00000399638 RNASE13Q5GAN3 156 aaKnown RBP8.9□□□□□ -0.99
CACNA1C-216ENST00000399638 DUX4L9Q6RFH8 374 aaPredicted RBP8.9□□□□□ -0.99
CACNA1C-216ENST00000399638 hDV102S1A0JD36 115 aa8.89□□□□□ -0.99
CACNA1C-216ENST00000399638 A8MWP6 167 aa8.89□□□□□ -0.99
CACNA1C-216ENST00000399638 IGHG2P01859 326 aa8.89□□□□□ -0.99
CACNA1C-216ENST00000399638 ZNF138P52744 262 aa8.89□□□□□ -0.99
CACNA1C-216ENST00000399638 RPL23P62829 140 aaKnown RBP8.89□□□□□ -0.99
CACNA1C-216ENST00000399638 CASC2Q6XLA1 102 aa8.89□□□□□ -0.99
CACNA1C-216ENST00000399638 ZNF497Q6ZNH5 498 aa8.89□□□□□ -0.99
CACNA1C-216ENST00000399638 IGHV3-30P01768 117 aa8.89□□□□□ -0.99
CACNA1C-216ENST00000399638 IGHV3-33P01772 117 aa8.89□□□□□ -0.99
CACNA1C-216ENST00000399638 IGHV3-30-3P0DP02 117 aa8.89□□□□□ -0.99
CACNA1C-216ENST00000399638 IGHV3-30-5P0DP03 117 aa8.89□□□□□ -0.99
CACNA1C-216ENST00000399638 RAMP3O60896 148 aa8.89□□□□□ -0.99
CACNA1C-216ENST00000399638 INAFM2P0DMQ5 153 aa8.89□□□□□ -0.99
CACNA1C-216ENST00000399638 UBE2AP49459 152 aa8.89□□□□□ -0.99
CACNA1C-216ENST00000399638 RNF138Q8WVD3 245 aa8.89□□□□□ -0.99
CACNA1C-216ENST00000399638 GAFA1Q96PS6 74 aa8.89□□□□□ -0.99
CACNA1C-216ENST00000399638 A0A0U1RQV1 116 aa8.89□□□□□ -0.99
CACNA1C-216ENST00000399638 F2Z2F3 143 aa8.89□□□□□ -0.99
CACNA1C-216ENST00000399638 IGKV4-1P06312 121 aa8.89□□□□□ -0.99
CACNA1C-216ENST00000399638 PYY3Q5JQD4 70 aa8.89□□□□□ -0.99
CACNA1C-216ENST00000399638 HIST1H2BLQ99880 126 aa8.89□□□□□ -0.99
CACNA1C-216ENST00000399638 TTC28Q96AY4 2481 aa8.89□□□□□ -0.99
CACNA1C-216ENST00000399638 SRCAPQ6ZRS2 3230 aa8.89□□□□□ -0.99
CACNA1C-216ENST00000399638 ARHGEF17Q96PE2 2063 aaPredicted RBP8.89□□□□□ -0.99
CACNA1C-216ENST00000399638 IGKV1-39P01597 117 aa8.89□□□□□ -0.99
CACNA1C-216ENST00000399638 IGKV1D-39P04432 117 aa8.89□□□□□ -0.99
CACNA1C-216ENST00000399638 LAGE3Q14657 143 aa8.89□□□□□ -0.99
CACNA1C-216ENST00000399638 POU2AF1Q16633 256 aa8.89□□□□□ -0.99
CACNA1C-216ENST00000399638 SMAD5-AS1Q9Y6J3 95 aa8.89□□□□□ -0.99
CACNA1C-216ENST00000399638 SBF1O95248 1867 aa8.88□□□□□ -0.99
CACNA1C-216ENST00000399638 MYOFQ9NZM1 2061 aa8.88□□□□□ -0.99
CACNA1C-216ENST00000399638 CFHR2P36980 270 aa8.88□□□□□ -0.99
CACNA1C-216ENST00000399638 C8orf86Q6ZUL3 223 aa8.88□□□□□ -0.99
CACNA1C-216ENST00000399638 MESP1Q9BRJ9 268 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms