RNA–Protein interactions for RNA: ENST00000399629.5

CACNA1C-213, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-213ENST00000399629 GAGE2EQ4V326 116 aa9.67□□□□□ -0.86
CACNA1C-213ENST00000399629 C1orf43Q9BWL3 253 aa9.67□□□□□ -0.86
CACNA1C-213ENST00000399629 WFDC1Q9HC57 220 aa9.67□□□□□ -0.86
CACNA1C-213ENST00000399629 GAGE2DQ9UEU5 116 aa9.67□□□□□ -0.86
CACNA1C-213ENST00000399629 IGHV1-24A0A0C4DH33 117 aa9.66□□□□□ -0.86
CACNA1C-213ENST00000399629 YPEL3P61236 119 aaPredicted RBP9.66□□□□□ -0.86
CACNA1C-213ENST00000399629 Q6ZQT7 251 aa9.66□□□□□ -0.86
CACNA1C-213ENST00000399629 CRLF1O75462 422 aa9.66□□□□□ -0.86
CACNA1C-213ENST00000399629 NTF4P34130 210 aa9.66□□□□□ -0.86
CACNA1C-213ENST00000399629 IFITM2Q01629 132 aa9.66□□□□□ -0.86
CACNA1C-213ENST00000399629 C1orf194Q5T5A4 169 aa9.66□□□□□ -0.86
CACNA1C-213ENST00000399629 C15orf53Q8NAA6 179 aa9.66□□□□□ -0.86
CACNA1C-213ENST00000399629 KIAA1671Q9BY89 1806 aa9.66□□□□□ -0.86
CACNA1C-213ENST00000399629 C5orf63A6NC05 138 aa9.66□□□□□ -0.86
CACNA1C-213ENST00000399629 PFN1P07737 140 aaKnown RBP9.66□□□□□ -0.86
CACNA1C-213ENST00000399629 SPART-AS1P0CW21 52 aa9.66□□□□□ -0.86
CACNA1C-213ENST00000399629 LOXP28300 417 aaPredicted RBP9.66□□□□□ -0.86
CACNA1C-213ENST00000399629 C8orf49Q96NF6 230 aa9.66□□□□□ -0.86
CACNA1C-213ENST00000399629 C4orf48Q5BLP8 95 aa9.66□□□□□ -0.86
CACNA1C-213ENST00000399629 RNF126Q9BV68 326 aa9.66□□□□□ -0.86
CACNA1C-213ENST00000399629 FAM215AQ9Y5M1 114 aa9.66□□□□□ -0.86
CACNA1C-213ENST00000399629 MMP23AO75900 390 aa9.66□□□□□ -0.86
CACNA1C-213ENST00000399629 RHOHQ15669 191 aa9.66□□□□□ -0.86
CACNA1C-213ENST00000399629 TRAV8-1A0A0A6YYK1 113 aa9.66□□□□□ -0.86
CACNA1C-213ENST00000399629 HS3ST6Q96QI5 342 aa9.66□□□□□ -0.86
CACNA1C-213ENST00000399629 MLANAQ16655 118 aa9.65□□□□□ -0.86
CACNA1C-213ENST00000399629 C5orf24Q7Z6I8 188 aa9.65□□□□□ -0.86
CACNA1C-213ENST00000399629 TEX36Q5VZQ5 186 aa9.65□□□□□ -0.86
CACNA1C-213ENST00000399629 TMEM75Q8N9X5 138 aa9.65□□□□□ -0.86
CACNA1C-213ENST00000399629 ZNF503Q96F45 646 aa9.65□□□□□ -0.86
CACNA1C-213ENST00000399629 NDUFS7O75251 213 aa9.65□□□□□ -0.86
CACNA1C-213ENST00000399629 SLURP1P55000 103 aa9.65□□□□□ -0.86
CACNA1C-213ENST00000399629 TIRAPP58753 221 aa9.65□□□□□ -0.86
CACNA1C-213ENST00000399629 SNRNP200O75643 2136 aaKnown RBP9.65□□□□□ -0.86
CACNA1C-213ENST00000399629 DUX4L9Q6RFH8 374 aaPredicted RBP9.65□□□□□ -0.87
CACNA1C-213ENST00000399629 SHISA9B4DS77 424 aa9.64□□□□□ -0.87
CACNA1C-213ENST00000399629 FOXE3Q13461 319 aa9.64□□□□□ -0.87
CACNA1C-213ENST00000399629 Q86TA4 180 aa9.64□□□□□ -0.87
CACNA1C-213ENST00000399629 TMEM170AQ8WVE7 144 aa9.64□□□□□ -0.87
CACNA1C-213ENST00000399629 AGMATQ9BSE5 352 aa9.64□□□□□ -0.87
CACNA1C-213ENST00000399629 FNDC4Q9H6D8 234 aaPredicted RBP9.64□□□□□ -0.87
CACNA1C-213ENST00000399629 FRMPD3Q5JV73 1810 aa9.64□□□□□ -0.87
CACNA1C-213ENST00000399629 FNDC1Q4ZHG4 1894 aaPredicted RBP9.64□□□□□ -0.87
CACNA1C-213ENST00000399629 IGHV4-61A0A0C4DH41 118 aa9.64□□□□□ -0.87
CACNA1C-213ENST00000399629 ZNF134P52741 427 aa9.64□□□□□ -0.87
CACNA1C-213ENST00000399629 FOXI2Q6ZQN5 318 aa9.64□□□□□ -0.87
CACNA1C-213ENST00000399629 MPZP25189 248 aa9.64□□□□□ -0.87
CACNA1C-213ENST00000399629 SLX1AQ9BQ83 275 aa9.64□□□□□ -0.87
CACNA1C-213ENST00000399629 KLHDC3Q9BQ90 382 aa9.64□□□□□ -0.87
CACNA1C-213ENST00000399629 SCRT2Q9NQ03 307 aa9.64□□□□□ -0.87
CACNA1C-213ENST00000399629 TP53TG1Q9Y2A0 90 aa9.64□□□□□ -0.87
CACNA1C-213ENST00000399629 TRAV8-3A0A0A6YYJ7 113 aa9.63□□□□□ -0.87
CACNA1C-213ENST00000399629 RNF222A6NCQ9 220 aa9.63□□□□□ -0.87
CACNA1C-213ENST00000399629 FOXL2NBQ6ZUU3 175 aa9.63□□□□□ -0.87
CACNA1C-213ENST00000399629 ICE1Q9Y2F5 2266 aa9.63□□□□□ -0.87
CACNA1C-213ENST00000399629 SMAD5-AS1Q9Y6J3 95 aa9.63□□□□□ -0.87
CACNA1C-213ENST00000399629 HLA-DRB4P13762 266 aa9.63□□□□□ -0.87
CACNA1C-213ENST00000399629 HLA-DRB4X5D2U9 266 aa9.63□□□□□ -0.87
CACNA1C-213ENST00000399629 IGLV3-9A0A075B6K5 115 aa9.63□□□□□ -0.87
CACNA1C-213ENST00000399629 K7EM74 188 aa9.63□□□□□ -0.87
CACNA1C-213ENST00000399629 IGHV4-38-2P0DP08 117 aa9.63□□□□□ -0.87
CACNA1C-213ENST00000399629 FNDC10F2Z333 226 aa9.63□□□□□ -0.87
CACNA1C-213ENST00000399629 NUP35Q8NFH5 326 aa9.63□□□□□ -0.87
CACNA1C-213ENST00000399629 TMEM141Q96I45 108 aa9.63□□□□□ -0.87
CACNA1C-213ENST00000399629 IGHV3-30P01768 117 aa9.62□□□□□ -0.87
CACNA1C-213ENST00000399629 IGHV3-33P01772 117 aa9.62□□□□□ -0.87
CACNA1C-213ENST00000399629 IGHV3-30-3P0DP02 117 aa9.62□□□□□ -0.87
CACNA1C-213ENST00000399629 IGHV3-30-5P0DP03 117 aa9.62□□□□□ -0.87
CACNA1C-213ENST00000399629 ESDP10768 282 aa9.62□□□□□ -0.87
CACNA1C-213ENST00000399629 C17orf58Q2M2W7 97 aa9.62□□□□□ -0.87
CACNA1C-213ENST00000399629 APRG1Q8IVJ8 170 aa9.62□□□□□ -0.87
CACNA1C-213ENST00000399629 AMN1Q8IY45 258 aa9.62□□□□□ -0.87
CACNA1C-213ENST00000399629 DMRT1Q9Y5R6 373 aa9.62□□□□□ -0.87
CACNA1C-213ENST00000399629 C2orf82Q6UX34 121 aa9.62□□□□□ -0.87
CACNA1C-213ENST00000399629 J3QRE1 110 aa9.62□□□□□ -0.87
CACNA1C-213ENST00000399629 ZFP36P26651 326 aaKnown RBP9.62□□□□□ -0.87
CACNA1C-213ENST00000399629 ATP6V0BQ99437 205 aa9.62□□□□□ -0.87
CACNA1C-213ENST00000399629 BUB3O43684 328 aa9.61□□□□□ -0.87
CACNA1C-213ENST00000399629 C16orf74Q96GX8 76 aa9.61□□□□□ -0.87
CACNA1C-213ENST00000399629 ZNF479Q96JC4 524 aa9.61□□□□□ -0.87
CACNA1C-213ENST00000399629 C15orf62A8K5M9 175 aa9.61□□□□□ -0.87
CACNA1C-213ENST00000399629 Q6ZR03 302 aa9.61□□□□□ -0.87
CACNA1C-213ENST00000399629 DEFB105AQ8NG35 78 aa9.61□□□□□ -0.87
CACNA1C-213ENST00000399629 U3KQE9 123 aa9.61□□□□□ -0.87
CACNA1C-213ENST00000399629 XCL1P47992 114 aa9.61□□□□□ -0.87
CACNA1C-213ENST00000399629 MRPL23Q16540 153 aaKnown RBP9.61□□□□□ -0.87
CACNA1C-213ENST00000399629 IGLL5B9A064 214 aa9.61□□□□□ -0.87
CACNA1C-213ENST00000399629 IGHV2-70P01814 119 aa9.61□□□□□ -0.87
CACNA1C-213ENST00000399629 HSD52Q0P140 79 aa9.61□□□□□ -0.87
CACNA1C-213ENST00000399629 LAIR2Q6ISS4 152 aa9.61□□□□□ -0.87
CACNA1C-213ENST00000399629 ATP5G1P05496 136 aa9.6□□□□□ -0.87
CACNA1C-213ENST00000399629 NDUFA4L2Q9NRX3 87 aa9.6□□□□□ -0.87
CACNA1C-213ENST00000399629 CARHSP1Q9Y2V2 147 aaKnown RBP9.6□□□□□ -0.87
CACNA1C-213ENST00000399629 GAGE2AQ6NT46 116 aa9.6□□□□□ -0.87
CACNA1C-213ENST00000399629 TMEM14EPQ6UXP3 125 aa9.6□□□□□ -0.87
CACNA1C-213ENST00000399629 TM2D2Q9BX73 214 aa9.6□□□□□ -0.87
CACNA1C-213ENST00000399629 CD5LO43866 347 aa9.6□□□□□ -0.87
CACNA1C-213ENST00000399629 RNF183Q96D59 192 aa9.6□□□□□ -0.87
CACNA1C-213ENST00000399629 LAMTOR2Q9Y2Q5 125 aa9.6□□□□□ -0.87
CACNA1C-213ENST00000399629 TPRP12270 2363 aaKnown RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms