RNA–Protein interactions for RNA: ENST00000399127.5

COL25A1-202, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-202ENST00000399127 MFAP4P55083 255 aa9.21□□□□□ -0.94
COL25A1-202ENST00000399127 BAGE3Q86Y29 109 aa9.21□□□□□ -0.94
COL25A1-202ENST00000399127 ATOH7Q8N100 152 aa9.21□□□□□ -0.94
COL25A1-202ENST00000399127 C5orf17Q8NAS9 161 aa9.21□□□□□ -0.94
COL25A1-202ENST00000399127 SHANK2-AS3Q9BTD1 123 aa9.21□□□□□ -0.94
COL25A1-202ENST00000399127 C21orf62Q9NYP8 219 aa9.21□□□□□ -0.94
COL25A1-202ENST00000399127 ATP6V0E1O15342 81 aa9.21□□□□□ -0.94
COL25A1-202ENST00000399127 TCRAP04437 139 aa9.21□□□□□ -0.94
COL25A1-202ENST00000399127 YPEL3P61236 119 aaPredicted RBP9.21□□□□□ -0.94
COL25A1-202ENST00000399127 SMAGPQ0VAQ4 97 aa9.21□□□□□ -0.94
COL25A1-202ENST00000399127 SHISA2Q6UWI4 295 aa9.21□□□□□ -0.94
COL25A1-202ENST00000399127 C1RLQ9NZP8 487 aa9.21□□□□□ -0.94
COL25A1-202ENST00000399127 UBR5O95071 2799 aaPredicted RBP9.2□□□□□ -0.94
COL25A1-202ENST00000399127 IGHV4-30-2A0A087WSY4 118 aa9.2□□□□□ -0.94
COL25A1-202ENST00000399127 G3V318 75 aa9.2□□□□□ -0.94
COL25A1-202ENST00000399127 ZNF253O75346 499 aa9.2□□□□□ -0.94
COL25A1-202ENST00000399127 HIST1H1EP10412 219 aaKnown RBP9.2□□□□□ -0.94
COL25A1-202ENST00000399127 ZNF479Q96JC4 524 aa9.2□□□□□ -0.94
COL25A1-202ENST00000399127 SOX21Q9Y651 276 aaPredicted RBP9.2□□□□□ -0.94
COL25A1-202ENST00000399127 TRAV40A0A0B4J280 105 aa9.2□□□□□ -0.94
COL25A1-202ENST00000399127 H3BRN7 92 aa9.2□□□□□ -0.94
COL25A1-202ENST00000399127 GPX1P07203 203 aa9.2□□□□□ -0.94
COL25A1-202ENST00000399127 KIAA1644Q3SXP7 199 aa9.2□□□□□ -0.94
COL25A1-202ENST00000399127 MPV17L2Q567V2 206 aa9.2□□□□□ -0.94
COL25A1-202ENST00000399127 PRR31Q5SQ13 230 aa9.2□□□□□ -0.94
COL25A1-202ENST00000399127 LINC00322Q6ZN03 302 aaPredicted RBP9.2□□□□□ -0.94
COL25A1-202ENST00000399127 GOLT1AQ6ZVE7 132 aa9.2□□□□□ -0.94
COL25A1-202ENST00000399127 BPIFA4PQ86YQ2 179 aa9.2□□□□□ -0.94
COL25A1-202ENST00000399127 C10orf105Q8TEF2 133 aa9.2□□□□□ -0.94
COL25A1-202ENST00000399127 CHRDL1Q9BU40 450 aa9.2□□□□□ -0.94
COL25A1-202ENST00000399127 GTSF1LQ9H1H1 148 aa9.2□□□□□ -0.94
COL25A1-202ENST00000399127 NRN1Q9NPD7 142 aa9.2□□□□□ -0.94
COL25A1-202ENST00000399127 NAT8BQ9UHF3 227 aa9.2□□□□□ -0.94
COL25A1-202ENST00000399127 CSPG4Q6UVK1 2322 aa9.19□□□□□ -0.94
COL25A1-202ENST00000399127 TRAV9-1A0A075B6T8 112 aa9.19□□□□□ -0.94
COL25A1-202ENST00000399127 SMIM27A0A1W2PRY6 76 aa9.19□□□□□ -0.94
COL25A1-202ENST00000399127 HLA-DRB1P01911 266 aa9.19□□□□□ -0.94
COL25A1-202ENST00000399127 ZC2HC1AQ96GY0 325 aa9.19□□□□□ -0.94
COL25A1-202ENST00000399127 GPR82Q96P67 336 aa9.19□□□□□ -0.94
COL25A1-202ENST00000399127 THYN1Q9P016 225 aa9.19□□□□□ -0.94
COL25A1-202ENST00000399127 TMEM14CQ9P0S9 112 aa9.19□□□□□ -0.94
COL25A1-202ENST00000399127 KLF12Q9Y4X4 402 aa9.19□□□□□ -0.94
COL25A1-202ENST00000399127 TRAV8-6A0A0B4J262 113 aa9.19□□□□□ -0.94
COL25A1-202ENST00000399127 WI2-2373I1.2A0A1W2PRP0 233 aa9.19□□□□□ -0.94
COL25A1-202ENST00000399127 PTPN13Q12923 2485 aa9.19□□□□□ -0.94
COL25A1-202ENST00000399127 DEFB125Q8N687 156 aa9.19□□□□□ -0.94
COL25A1-202ENST00000399127 LINC00527Q9UJ94 153 aa9.19□□□□□ -0.94
COL25A1-202ENST00000399127 TRBV19A0A075B6N1 114 aa9.18□□□□□ -0.94
COL25A1-202ENST00000399127 CTSGP08311 255 aa9.18□□□□□ -0.94
COL25A1-202ENST00000399127 KRTAP10-9P60411 292 aa9.18□□□□□ -0.94
COL25A1-202ENST00000399127 CKS1BP61024 79 aa9.18□□□□□ -0.94
COL25A1-202ENST00000399127 PAX8Q06710 450 aa9.18□□□□□ -0.94
COL25A1-202ENST00000399127 C15orf32Q32M92 178 aa9.18□□□□□ -0.94
COL25A1-202ENST00000399127 C7orf69Q9H7B7 122 aa9.18□□□□□ -0.94
COL25A1-202ENST00000399127 OTORQ9NRC9 128 aa9.18□□□□□ -0.94
COL25A1-202ENST00000399127 M0R3E3 92 aa9.17□□□□□ -0.94
COL25A1-202ENST00000399127 IGHV4-38-2P0DP08 117 aa9.17□□□□□ -0.94
COL25A1-202ENST00000399127 PLA2G2AP14555 144 aa9.17□□□□□ -0.94
COL25A1-202ENST00000399127 GPR183P32249 361 aa9.17□□□□□ -0.94
COL25A1-202ENST00000399127 AMTP48728 403 aa9.17□□□□□ -0.94
COL25A1-202ENST00000399127 PRNTQ86SH4 94 aa9.17□□□□□ -0.94
COL25A1-202ENST00000399127 FMC1Q96HJ9 113 aa9.17□□□□□ -0.94
COL25A1-202ENST00000399127 J3QKU1 62 aa9.17□□□□□ -0.94
COL25A1-202ENST00000399127 LTAP01374 205 aa9.17□□□□□ -0.94
COL25A1-202ENST00000399127 AMY1AP04745 511 aa9.17□□□□□ -0.94
COL25A1-202ENST00000399127 C3orf79P0CE67 100 aa9.17□□□□□ -0.94
COL25A1-202ENST00000399127 CIARTQ8N365 385 aaPredicted RBP9.17□□□□□ -0.94
COL25A1-202ENST00000399127 MLST8Q9BVC4 326 aa9.17□□□□□ -0.94
COL25A1-202ENST00000399127 MUC21A0A0G2JKD1 596 aa9.16□□□□□ -0.94
COL25A1-202ENST00000399127 MUC21A0A140T8X8 626 aa9.16□□□□□ -0.94
COL25A1-202ENST00000399127 MUC21Q5SSG8 566 aa9.16□□□□□ -0.94
COL25A1-202ENST00000399127 HIST2H2BCQ6DN03 193 aa9.16□□□□□ -0.94
COL25A1-202ENST00000399127 SIGLEC15Q6ZMC9 328 aa9.16□□□□□ -0.94
COL25A1-202ENST00000399127 TMEM136Q6ZRR5 245 aa9.16□□□□□ -0.94
COL25A1-202ENST00000399127 FAM231DQ6ZW35 169 aa9.16□□□□□ -0.94
COL25A1-202ENST00000399127 NUP35Q8NFH5 326 aa9.16□□□□□ -0.94
COL25A1-202ENST00000399127 MBD6Q96DN6 1003 aa9.16□□□□□ -0.94
COL25A1-202ENST00000399127 GNB1LQ9BYB4 327 aa9.16□□□□□ -0.94
COL25A1-202ENST00000399127 TP73-AS1Q9UF72 201 aa9.16□□□□□ -0.94
COL25A1-202ENST00000399127 IGHV1-69DA0A0B4J2H0 117 aa9.16□□□□□ -0.94
COL25A1-202ENST00000399127 HIGD1CA8MV81 97 aa9.16□□□□□ -0.94
COL25A1-202ENST00000399127 MRPS12O15235 138 aaKnown RBP9.16□□□□□ -0.94
COL25A1-202ENST00000399127 IGLV2-11P01706 119 aa9.16□□□□□ -0.94
COL25A1-202ENST00000399127 IGHV1-69P01742 117 aa9.16□□□□□ -0.94
COL25A1-202ENST00000399127 PMCHP20382 165 aa9.16□□□□□ -0.94
COL25A1-202ENST00000399127 BVES-AS1Q5T3Y7 98 aa9.16□□□□□ -0.94
COL25A1-202ENST00000399127 Q86TA4 180 aa9.16□□□□□ -0.94
COL25A1-202ENST00000399127 GRAMD2BQ96HH9 432 aa9.16□□□□□ -0.94
COL25A1-202ENST00000399127 ZNF414Q96IQ9 312 aa9.16□□□□□ -0.94
COL25A1-202ENST00000399127 SIGMAR1Q99720 223 aa9.16□□□□□ -0.94
COL25A1-202ENST00000399127 IZUMO1RA6ND01 250 aa9.15□□□□□ -0.94
COL25A1-202ENST00000399127 GAGE10A6NGK3 116 aa9.15□□□□□ -0.94
COL25A1-202ENST00000399127 CLEC3BP05452 202 aa9.15□□□□□ -0.94
COL25A1-202ENST00000399127 Q0VG73 95 aa9.15□□□□□ -0.94
COL25A1-202ENST00000399127 LY6EQ16553 131 aa9.15□□□□□ -0.94
COL25A1-202ENST00000399127 C5orf56Q8N8D9 126 aa9.15□□□□□ -0.94
COL25A1-202ENST00000399127 FAM110DQ8TAY7 271 aaPredicted RBP9.15□□□□□ -0.94
COL25A1-202ENST00000399127 GNB4Q9HAV0 340 aa9.15□□□□□ -0.94
COL25A1-202ENST00000399127 SELENOKQ9Y6D0 94 aa9.15□□□□□ -0.94
COL25A1-202ENST00000399127 VWC2LB2RUY7 222 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms