RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 PRM2P04554 102 aa10.13□□□□□ -0.79
HLA-DQB1-202ENST00000399079 EMP1P54849 157 aa10.13□□□□□ -0.79
HLA-DQB1-202ENST00000399079 EXOC3-AS1Q8N2X6 119 aa10.13□□□□□ -0.79
HLA-DQB1-202ENST00000399079 ASB13Q8WXK3 278 aa10.13□□□□□ -0.79
HLA-DQB1-202ENST00000399079 NEU1Q99519 415 aa10.13□□□□□ -0.79
HLA-DQB1-202ENST00000399079 MRPL32Q9BYC8 188 aaKnown RBP10.13□□□□□ -0.79
HLA-DQB1-202ENST00000399079 OR51M1Q9H341 326 aa10.13□□□□□ -0.79
HLA-DQB1-202ENST00000399079 PPP1R14DQ9NXH3 145 aa10.13□□□□□ -0.79
HLA-DQB1-202ENST00000399079 GOLT1BQ9Y3E0 138 aa10.13□□□□□ -0.79
HLA-DQB1-202ENST00000399079 TIMM9Q9Y5J7 89 aa10.13□□□□□ -0.79
HLA-DQB1-202ENST00000399079 SACSQ9NZJ4 4579 aa10.13□□□□□ -0.79
HLA-DQB1-202ENST00000399079 RNF222A6NCQ9 220 aa10.12□□□□□ -0.79
HLA-DQB1-202ENST00000399079 G3V3Q6 166 aa10.12□□□□□ -0.79
HLA-DQB1-202ENST00000399079 ZNF253O75346 499 aa10.12□□□□□ -0.79
HLA-DQB1-202ENST00000399079 NBEAP1P0C6P0 100 aa10.12□□□□□ -0.79
HLA-DQB1-202ENST00000399079 KIR3DS1Q14943 382 aa10.12□□□□□ -0.79
HLA-DQB1-202ENST00000399079 ZNF767PQ75MW2 155 aa10.12□□□□□ -0.79
HLA-DQB1-202ENST00000399079 HSD17B11Q8NBQ5 300 aa10.12□□□□□ -0.79
HLA-DQB1-202ENST00000399079 ZNF503Q96F45 646 aa10.12□□□□□ -0.79
HLA-DQB1-202ENST00000399079 TMEM208Q9BTX3 173 aa10.12□□□□□ -0.79
HLA-DQB1-202ENST00000399079 PAXXQ9BUH6 204 aa10.12□□□□□ -0.79
HLA-DQB1-202ENST00000399079 OR7C2O60412 319 aa10.12□□□□□ -0.79
HLA-DQB1-202ENST00000399079 INSP01308 110 aa10.12□□□□□ -0.79
HLA-DQB1-202ENST00000399079 PDE6HQ13956 83 aa10.12□□□□□ -0.79
HLA-DQB1-202ENST00000399079 OR10J6PQ8NGY7 276 aa10.12□□□□□ -0.79
HLA-DQB1-202ENST00000399079 RNF141Q8WVD5 230 aa10.12□□□□□ -0.79
HLA-DQB1-202ENST00000399079 FXYD5Q96DB9 178 aa10.12□□□□□ -0.79
HLA-DQB1-202ENST00000399079 SMIM9A6NGZ8 99 aa10.11□□□□□ -0.79
HLA-DQB1-202ENST00000399079 AMBPP02760 352 aa10.11□□□□□ -0.79
HLA-DQB1-202ENST00000399079 RAB2AP61019 212 aa10.11□□□□□ -0.79
HLA-DQB1-202ENST00000399079 ZNF266Q14584 549 aa10.11□□□□□ -0.79
HLA-DQB1-202ENST00000399079 ICAM4Q14773 271 aa10.11□□□□□ -0.79
HLA-DQB1-202ENST00000399079 Q6ZTC4 211 aa10.11□□□□□ -0.79
HLA-DQB1-202ENST00000399079 RPP25LQ8N5L8 163 aaKnown RBP10.11□□□□□ -0.79
HLA-DQB1-202ENST00000399079 INO80EQ8NBZ0 244 aaPredicted RBP10.11□□□□□ -0.79
HLA-DQB1-202ENST00000399079 TNFSF18Q9UNG2 199 aa10.11□□□□□ -0.79
HLA-DQB1-202ENST00000399079 ZNF705GA8MUZ8 300 aaPredicted RBP10.1□□□□□ -0.79
HLA-DQB1-202ENST00000399079 SMLR1H3BR10 107 aa10.1□□□□□ -0.79
HLA-DQB1-202ENST00000399079 HBE1P02100 147 aa10.1□□□□□ -0.79
HLA-DQB1-202ENST00000399079 M6PRP20645 277 aa10.1□□□□□ -0.79
HLA-DQB1-202ENST00000399079 CDKN1BP46527 198 aa10.1□□□□□ -0.79
HLA-DQB1-202ENST00000399079 RRN3P1Q2M238 152 aa10.1□□□□□ -0.79
HLA-DQB1-202ENST00000399079 FAM122CQ6P4D5 195 aa10.1□□□□□ -0.79
HLA-DQB1-202ENST00000399079 PHYHIPLQ96FC7 376 aa10.1□□□□□ -0.79
HLA-DQB1-202ENST00000399079 LOC102723971A0A1B0GUV8 181 aa10.09□□□□□ -0.79
HLA-DQB1-202ENST00000399079 J3KRW8 73 aa10.09□□□□□ -0.79
HLA-DQB1-202ENST00000399079 CT45A10P0DMU9 189 aa10.09□□□□□ -0.79
HLA-DQB1-202ENST00000399079 ATP6V0CP27449 155 aa10.09□□□□□ -0.79
HLA-DQB1-202ENST00000399079 ERCC8Q13216 396 aa10.09□□□□□ -0.79
HLA-DQB1-202ENST00000399079 C12orf74Q32Q52 190 aa10.09□□□□□ -0.79
HLA-DQB1-202ENST00000399079 ACOT6Q3I5F7 207 aaPredicted RBP10.09□□□□□ -0.79
HLA-DQB1-202ENST00000399079 SH3BGRL3Q9H299 93 aa10.09□□□□□ -0.79
HLA-DQB1-202ENST00000399079 AAMDCQ9H7C9 122 aa10.09□□□□□ -0.79
HLA-DQB1-202ENST00000399079 KLK5Q9Y337 293 aaPredicted RBP10.09□□□□□ -0.79
HLA-DQB1-202ENST00000399079 RYR2Q92736 4967 aa10.08□□□□□ -0.8
HLA-DQB1-202ENST00000399079 NPIPB6E9PJ23 425 aa10.08□□□□□ -0.8
HLA-DQB1-202ENST00000399079 HMGB3O15347 200 aaKnown RBP10.08□□□□□ -0.8
HLA-DQB1-202ENST00000399079 JTBO76095 146 aa10.08□□□□□ -0.8
HLA-DQB1-202ENST00000399079 HTN1P15515 57 aa10.08□□□□□ -0.8
HLA-DQB1-202ENST00000399079 RANP62826 216 aaKnown RBP10.08□□□□□ -0.8
HLA-DQB1-202ENST00000399079 UBE2L3P68036 154 aaKnown RBP10.08□□□□□ -0.8
HLA-DQB1-202ENST00000399079 KHDC3LQ587J8 217 aa10.08□□□□□ -0.8
HLA-DQB1-202ENST00000399079 RPL7L1Q6DKI1 246 aaKnown RBP10.08□□□□□ -0.8
HLA-DQB1-202ENST00000399079 OR10G4Q8NGN3 311 aa10.08□□□□□ -0.8
HLA-DQB1-202ENST00000399079 OR10G9Q8NGN4 311 aa10.08□□□□□ -0.8
HLA-DQB1-202ENST00000399079 OR10G7Q8NGN6 311 aa10.08□□□□□ -0.8
HLA-DQB1-202ENST00000399079 MRPL53Q96EL3 112 aaKnown RBP10.08□□□□□ -0.8
HLA-DQB1-202ENST00000399079 LINC01587Q99440 93 aa10.08□□□□□ -0.8
HLA-DQB1-202ENST00000399079 YTHDF2Q9Y5A9 579 aaKnown RBP10.08□□□□□ -0.8
HLA-DQB1-202ENST00000399079 IGKV2-40A0A087WW87 121 aaPredicted RBP10.07□□□□□ -0.8
HLA-DQB1-202ENST00000399079 A0A1W2PPV4 95 aa10.07□□□□□ -0.8
HLA-DQB1-202ENST00000399079 TMEM189A5PLL7 270 aa10.07□□□□□ -0.8
HLA-DQB1-202ENST00000399079 ARPC5O15511 151 aa10.07□□□□□ -0.8
HLA-DQB1-202ENST00000399079 IGKV2D-40P01614 121 aaPredicted RBP10.07□□□□□ -0.8
HLA-DQB1-202ENST00000399079 AZU1P20160 251 aa10.07□□□□□ -0.8
HLA-DQB1-202ENST00000399079 TAS2R45P59539 299 aa10.07□□□□□ -0.8
HLA-DQB1-202ENST00000399079 FAM222AQ5U5X8 452 aa10.07□□□□□ -0.8
HLA-DQB1-202ENST00000399079 DKK2Q9UBU2 259 aa10.07□□□□□ -0.8
HLA-DQB1-202ENST00000399079 PRELID1Q9Y255 219 aa10.07□□□□□ -0.8
HLA-DQB1-202ENST00000399079 SPART-AS1P0CW21 52 aa10.07□□□□□ -0.8
HLA-DQB1-202ENST00000399079 GFI1BQ5VTD9 330 aa10.07□□□□□ -0.8
HLA-DQB1-202ENST00000399079 OR2G3Q8NGZ4 309 aa10.07□□□□□ -0.8
HLA-DQB1-202ENST00000399079 VGLL1Q99990 258 aa10.07□□□□□ -0.8
HLA-DQB1-202ENST00000399079 PSMG3Q9BT73 122 aaPredicted RBP10.07□□□□□ -0.8
HLA-DQB1-202ENST00000399079 AGPAT4-IT1Q9H0P7 198 aa10.07□□□□□ -0.8
HLA-DQB1-202ENST00000399079 IGLL5B9A064 214 aa10.06□□□□□ -0.8
HLA-DQB1-202ENST00000399079 C11orf94C9JXX5 98 aa10.06□□□□□ -0.8
HLA-DQB1-202ENST00000399079 TSPOP30536 169 aa10.06□□□□□ -0.8
HLA-DQB1-202ENST00000399079 C2CD4CQ8TF44 421 aa10.06□□□□□ -0.8
HLA-DQB1-202ENST00000399079 Q9H3A6 140 aa10.06□□□□□ -0.8
HLA-DQB1-202ENST00000399079 HYDINQ4G0P3 5121 aa10.06□□□□□ -0.8
HLA-DQB1-202ENST00000399079 TRAV10A0A0B4J240 114 aa10.05□□□□□ -0.8
HLA-DQB1-202ENST00000399079 TRAV12-3A0A0B4J271 114 aa10.05□□□□□ -0.8
HLA-DQB1-202ENST00000399079 CDC34P49427 236 aaPredicted RBP10.05□□□□□ -0.8
HLA-DQB1-202ENST00000399079 TMEM256Q8N2U0 113 aa10.05□□□□□ -0.8
HLA-DQB1-202ENST00000399079 LINC00476Q8WZB0 136 aa10.05□□□□□ -0.8
HLA-DQB1-202ENST00000399079 ALMS1Q8TCU4 4167 aa10.04□□□□□ -0.8
HLA-DQB1-202ENST00000399079 DEFB131BA0A096LNP1 70 aa10.04□□□□□ -0.8
HLA-DQB1-202ENST00000399079 BORCS7-ASMTA0A0B4J1R7 106 aa10.04□□□□□ -0.8
HLA-DQB1-202ENST00000399079 PLAC8L1A1L4L8 177 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms