RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 RLFQ13129 1914 aa6.7□□□□□ -1.34
SPTLC3-201ENST00000399002 SLAQ13239 276 aa6.7□□□□□ -1.34
SPTLC3-201ENST00000399002 HOXD3P31249 432 aaPredicted RBP6.69□□□□□ -1.34
SPTLC3-201ENST00000399002 ZNF726P1Q15940 193 aa6.69□□□□□ -1.34
SPTLC3-201ENST00000399002 LYPD6BQ8NI32 183 aa6.69□□□□□ -1.34
SPTLC3-201ENST00000399002 PRR25Q96S07 402 aa6.69□□□□□ -1.34
SPTLC3-201ENST00000399002 TMEM243Q9BU79 118 aa6.69□□□□□ -1.34
SPTLC3-201ENST00000399002 IGLV3-9A0A075B6K5 115 aa6.69□□□□□ -1.34
SPTLC3-201ENST00000399002 RPL35AP18077 110 aaKnown RBP6.69□□□□□ -1.34
SPTLC3-201ENST00000399002 RPL32P62910 135 aaKnown RBP6.69□□□□□ -1.34
SPTLC3-201ENST00000399002 RNF144BQ7Z419 303 aa6.69□□□□□ -1.34
SPTLC3-201ENST00000399002 LHFPL4Q7Z7J7 247 aa6.69□□□□□ -1.34
SPTLC3-201ENST00000399002 C1orf159Q96HA4 380 aa6.69□□□□□ -1.34
SPTLC3-201ENST00000399002 SCN5AQ14524 2016 aa6.69□□□□□ -1.34
SPTLC3-201ENST00000399002 SMKR1H3BMG3 65 aa6.69□□□□□ -1.34
SPTLC3-201ENST00000399002 PSCAO43653 123 aa6.69□□□□□ -1.34
SPTLC3-201ENST00000399002 CDKN1BP46527 198 aa6.69□□□□□ -1.34
SPTLC3-201ENST00000399002 NPC2P61916 151 aa6.69□□□□□ -1.34
SPTLC3-201ENST00000399002 KRTAP27-1Q3LI81 207 aa6.69□□□□□ -1.34
SPTLC3-201ENST00000399002 TRAV8-1A0A0A6YYK1 113 aa6.69□□□□□ -1.34
SPTLC3-201ENST00000399002 C9JAW5 83 aa6.69□□□□□ -1.34
SPTLC3-201ENST00000399002 Q8NFD4 153 aa6.69□□□□□ -1.34
SPTLC3-201ENST00000399002 A0A087WWL8 130 aa6.69□□□□□ -1.34
SPTLC3-201ENST00000399002 OVOL3O00110 214 aa6.69□□□□□ -1.34
SPTLC3-201ENST00000399002 ELANEP08246 267 aa6.69□□□□□ -1.34
SPTLC3-201ENST00000399002 AZU1P20160 251 aa6.69□□□□□ -1.34
SPTLC3-201ENST00000399002 LY6DQ14210 128 aa6.69□□□□□ -1.34
SPTLC3-201ENST00000399002 WFDC12Q8WWY7 111 aa6.69□□□□□ -1.34
SPTLC3-201ENST00000399002 ATP6V0BQ99437 205 aa6.69□□□□□ -1.34
SPTLC3-201ENST00000399002 TEX48A0A1B0GUV7 120 aa6.68□□□□□ -1.34
SPTLC3-201ENST00000399002 IGHV2-5P01817 119 aa6.68□□□□□ -1.34
SPTLC3-201ENST00000399002 FOXE3Q13461 319 aa6.68□□□□□ -1.34
SPTLC3-201ENST00000399002 FXYD5Q96DB9 178 aa6.68□□□□□ -1.34
SPTLC3-201ENST00000399002 BPESC1Q9GZL8 116 aa6.68□□□□□ -1.34
SPTLC3-201ENST00000399002 IGHV7-4-1A0A0J9YVY3 117 aa6.68□□□□□ -1.34
SPTLC3-201ENST00000399002 OCIAD2Q56VL3 154 aa6.68□□□□□ -1.34
SPTLC3-201ENST00000399002 LINC00527Q9UJ94 153 aa6.68□□□□□ -1.34
SPTLC3-201ENST00000399002 NLRC5Q86WI3 1866 aa6.68□□□□□ -1.34
SPTLC3-201ENST00000399002 LOXP28300 417 aaPredicted RBP6.68□□□□□ -1.34
SPTLC3-201ENST00000399002 FOXI2Q6ZQN5 318 aa6.68□□□□□ -1.34
SPTLC3-201ENST00000399002 ZNF493Q6ZR52 646 aa6.68□□□□□ -1.34
SPTLC3-201ENST00000399002 PROK2Q9HC23 129 aa6.68□□□□□ -1.34
SPTLC3-201ENST00000399002 ZNF581Q9P0T4 197 aa6.68□□□□□ -1.34
SPTLC3-201ENST00000399002 TMEM213A2RRL7 107 aa6.68□□□□□ -1.34
SPTLC3-201ENST00000399002 IGLC2P0DOY2 106 aa6.68□□□□□ -1.34
SPTLC3-201ENST00000399002 IGLC3P0DOY3 106 aa6.68□□□□□ -1.34
SPTLC3-201ENST00000399002 HLA-DMBP28068 263 aa6.68□□□□□ -1.34
SPTLC3-201ENST00000399002 BRD3OSQ6XYD6 125 aa6.68□□□□□ -1.34
SPTLC3-201ENST00000399002 VOPP1Q96AW1 172 aa6.68□□□□□ -1.34
SPTLC3-201ENST00000399002 ZNF48Q96MX3 618 aaPredicted RBP6.68□□□□□ -1.34
SPTLC3-201ENST00000399002 KLHDC3Q9BQ90 382 aa6.68□□□□□ -1.34
SPTLC3-201ENST00000399002 EDA2RQ9HAV5 297 aa6.68□□□□□ -1.34
SPTLC3-201ENST00000399002 PIKFYVEQ9Y2I7 2098 aa6.68□□□□□ -1.34
SPTLC3-201ENST00000399002 PRSS47A8MTI9 375 aa6.68□□□□□ -1.34
SPTLC3-201ENST00000399002 IGHG4P01861 327 aa6.68□□□□□ -1.34
SPTLC3-201ENST00000399002 FXYD7P58549 80 aa6.68□□□□□ -1.34
SPTLC3-201ENST00000399002 DEFB131AP59861 70 aa6.68□□□□□ -1.34
SPTLC3-201ENST00000399002 ARTNQ5T4W7 220 aa6.68□□□□□ -1.34
SPTLC3-201ENST00000399002 Q6ZSR3 168 aa6.68□□□□□ -1.34
SPTLC3-201ENST00000399002 SHISA9B4DS77 424 aa6.67□□□□□ -1.34
SPTLC3-201ENST00000399002 ZNF561-AS1K7EIQ3 104 aa6.67□□□□□ -1.34
SPTLC3-201ENST00000399002 HERV-K104P63124 156 aa6.67□□□□□ -1.34
SPTLC3-201ENST00000399002 NUP210Q8TEM1 1887 aaPredicted RBP6.67□□□□□ -1.34
SPTLC3-201ENST00000399002 SYNJ2BPP57105 145 aa6.67□□□□□ -1.34
SPTLC3-201ENST00000399002 SMIM2Q9BVW6 85 aa6.67□□□□□ -1.34
SPTLC3-201ENST00000399002 TRAV13-1A0A0B4J241 112 aa6.67□□□□□ -1.34
SPTLC3-201ENST00000399002 LY6G6EA0A0G2JKS1 128 aa6.67□□□□□ -1.34
SPTLC3-201ENST00000399002 IGKV1-39P01597 117 aa6.67□□□□□ -1.34
SPTLC3-201ENST00000399002 IGKV1D-39P04432 117 aa6.67□□□□□ -1.34
SPTLC3-201ENST00000399002 WDR86Q86TI4 376 aa6.67□□□□□ -1.34
SPTLC3-201ENST00000399002 CITED1Q99966 193 aa6.67□□□□□ -1.34
SPTLC3-201ENST00000399002 U3KQA8 63 aa6.67□□□□□ -1.34
SPTLC3-201ENST00000399002 ACYP1P07311 99 aa6.67□□□□□ -1.34
SPTLC3-201ENST00000399002 DAD1P61803 113 aa6.67□□□□□ -1.34
SPTLC3-201ENST00000399002 SNHG12Q9BXW3 62 aa6.67□□□□□ -1.34
SPTLC3-201ENST00000399002 UBL5Q9BZL1 73 aa6.67□□□□□ -1.34
SPTLC3-201ENST00000399002 DOCK6Q96HP0 2047 aa6.67□□□□□ -1.34
SPTLC3-201ENST00000399002 F8VRH5 84 aa6.67□□□□□ -1.34
SPTLC3-201ENST00000399002 IGHV3-53P01767 116 aa6.66□□□□□ -1.34
SPTLC3-201ENST00000399002 IGHV2-70P01814 119 aa6.66□□□□□ -1.34
SPTLC3-201ENST00000399002 IGF2-ASQ6U949 168 aa6.66□□□□□ -1.34
SPTLC3-201ENST00000399002 Q6ZR03 302 aa6.66□□□□□ -1.34
SPTLC3-201ENST00000399002 NKAPP1Q8N9T2 125 aa6.66□□□□□ -1.34
SPTLC3-201ENST00000399002 SIGLEC8Q9NYZ4 499 aa6.66□□□□□ -1.34
SPTLC3-201ENST00000399002 VWA8A3KMH1 1905 aa6.66□□□□□ -1.34
SPTLC3-201ENST00000399002 A0A1W2PPM0 123 aa6.66□□□□□ -1.34
SPTLC3-201ENST00000399002 EREGO14944 169 aa6.66□□□□□ -1.34
SPTLC3-201ENST00000399002 PRR20EP86478 221 aa6.66□□□□□ -1.34
SPTLC3-201ENST00000399002 PRR20CP86479 221 aa6.66□□□□□ -1.34
SPTLC3-201ENST00000399002 PRR20DP86480 221 aa6.66□□□□□ -1.34
SPTLC3-201ENST00000399002 PRR20BP86481 221 aa6.66□□□□□ -1.34
SPTLC3-201ENST00000399002 PRR20AP86496 221 aa6.66□□□□□ -1.34
SPTLC3-201ENST00000399002 IGFBPL1Q8WX77 278 aa6.66□□□□□ -1.34
SPTLC3-201ENST00000399002 INS-IGF2F8WCM5 200 aa6.66□□□□□ -1.34
SPTLC3-201ENST00000399002 STPG4Q8N801 248 aa6.66□□□□□ -1.34
SPTLC3-201ENST00000399002 NPBQ8NG41 125 aa6.66□□□□□ -1.34
SPTLC3-201ENST00000399002 SDHAF1A6NFY7 115 aa6.66□□□□□ -1.34
SPTLC3-201ENST00000399002 TCF15Q12870 199 aa6.66□□□□□ -1.34
SPTLC3-201ENST00000399002 ANXA2RQ3ZCQ2 193 aa6.66□□□□□ -1.34
SPTLC3-201ENST00000399002 Q6ZWC4 215 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms