RNA–Protein interactions for RNA: ENST00000398604.2

PCDHGA8-201, Transcript of protocadherin gamma subfamily A, 8, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA8, Length 4,605 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA8-201ENST00000398604 CYYR1Q96J86 154 aa9.32□□□□□ -0.92
PCDHGA8-201ENST00000398604 MRPS16Q9Y3D3 137 aaKnown RBP9.32□□□□□ -0.92
PCDHGA8-201ENST00000398604 D6R8Y8 96 aa9.32□□□□□ -0.92
PCDHGA8-201ENST00000398604 SPSB3Q6PJ21 355 aa9.32□□□□□ -0.92
PCDHGA8-201ENST00000398604 LINC01551Q86U37 167 aa9.32□□□□□ -0.92
PCDHGA8-201ENST00000398604 A0A0C4DFX4 3053 aa9.32□□□□□ -0.92
PCDHGA8-201ENST00000398604 SLC25A16P16260 332 aa9.32□□□□□ -0.92
PCDHGA8-201ENST00000398604 COPS9Q8WXC6 57 aa9.32□□□□□ -0.92
PCDHGA8-201ENST00000398604 EYSQ5T1H1 3165 aa9.32□□□□□ -0.92
PCDHGA8-201ENST00000398604 IGLV3-9A0A075B6K5 115 aa9.32□□□□□ -0.92
PCDHGA8-201ENST00000398604 TRGV11A0A075B6L2 103 aa9.32□□□□□ -0.92
PCDHGA8-201ENST00000398604 A0A1B0GV72 72 aa9.32□□□□□ -0.92
PCDHGA8-201ENST00000398604 A0A1B0GW15 77 aa9.32□□□□□ -0.92
PCDHGA8-201ENST00000398604 A6NNC1 897 aa9.32□□□□□ -0.92
PCDHGA8-201ENST00000398604 SMKR1H3BMG3 65 aa9.32□□□□□ -0.92
PCDHGA8-201ENST00000398604 NDUFB8O95169 186 aa9.32□□□□□ -0.92
PCDHGA8-201ENST00000398604 NAA38Q9BRA0 125 aaKnown RBP9.32□□□□□ -0.92
PCDHGA8-201ENST00000398604 PEF1Q9UBV8 284 aaKnown RBP9.32□□□□□ -0.92
PCDHGA8-201ENST00000398604 FAM90A9PA6NNJ1 464 aa9.31□□□□□ -0.92
PCDHGA8-201ENST00000398604 UBE2DNLQ8IWF7 75 aa9.31□□□□□ -0.92
PCDHGA8-201ENST00000398604 TRGV9Q99603 122 aa9.31□□□□□ -0.92
PCDHGA8-201ENST00000398604 VGLL1Q99990 258 aa9.31□□□□□ -0.92
PCDHGA8-201ENST00000398604 NXT2Q9NPJ8 142 aaKnown RBP9.31□□□□□ -0.92
PCDHGA8-201ENST00000398604 LYL1P12980 280 aa9.31□□□□□ -0.92
PCDHGA8-201ENST00000398604 CFHR3Q02985 330 aa9.31□□□□□ -0.92
PCDHGA8-201ENST00000398604 RNF182Q8N6D2 247 aa9.31□□□□□ -0.92
PCDHGA8-201ENST00000398604 H3BUT2 72 aa9.31□□□□□ -0.92
PCDHGA8-201ENST00000398604 ZNF562Q6V9R5 426 aa9.31□□□□□ -0.92
PCDHGA8-201ENST00000398604 TMEM170AQ8WVE7 144 aa9.31□□□□□ -0.92
PCDHGA8-201ENST00000398604 LINC00477Q96M19 166 aa9.31□□□□□ -0.92
PCDHGA8-201ENST00000398604 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.3□□□□□ -0.92
PCDHGA8-201ENST00000398604 J3QKU1 62 aa9.3□□□□□ -0.92
PCDHGA8-201ENST00000398604 LINC00158P58513 81 aa9.3□□□□□ -0.92
PCDHGA8-201ENST00000398604 DIAPH2-AS1Q14236 149 aa9.3□□□□□ -0.92
PCDHGA8-201ENST00000398604 TMEM155Q4W5P6 130 aa9.3□□□□□ -0.92
PCDHGA8-201ENST00000398604 WDR86Q86TI4 376 aa9.3□□□□□ -0.92
PCDHGA8-201ENST00000398604 RNF5Q99942 180 aa9.3□□□□□ -0.92
PCDHGA8-201ENST00000398604 LIME1Q9H400 295 aa9.3□□□□□ -0.92
PCDHGA8-201ENST00000398604 ETV2O00321 342 aaPredicted RBP9.3□□□□□ -0.92
PCDHGA8-201ENST00000398604 RSPO1Q2MKA7 263 aaPredicted RBP9.3□□□□□ -0.92
PCDHGA8-201ENST00000398604 FAM169BQ8N8A8 192 aa9.3□□□□□ -0.92
PCDHGA8-201ENST00000398604 FAM110DQ8TAY7 271 aaPredicted RBP9.3□□□□□ -0.92
PCDHGA8-201ENST00000398604 TRIOO75962 3097 aa9.3□□□□□ -0.92
PCDHGA8-201ENST00000398604 TRAV13-1A0A0B4J241 112 aa9.3□□□□□ -0.92
PCDHGA8-201ENST00000398604 DKK1O94907 266 aa9.3□□□□□ -0.92
PCDHGA8-201ENST00000398604 PPBPP02775 128 aa9.3□□□□□ -0.92
PCDHGA8-201ENST00000398604 C9orf139Q6ZV77 190 aa9.3□□□□□ -0.92
PCDHGA8-201ENST00000398604 EML6Q6ZMW3 1958 aa9.3□□□□□ -0.92
PCDHGA8-201ENST00000398604 F2Z2F3 143 aa9.3□□□□□ -0.92
PCDHGA8-201ENST00000398604 CEACAM8P31997 349 aaPredicted RBP9.3□□□□□ -0.92
PCDHGA8-201ENST00000398604 TMEM95Q3KNT9 176 aa9.3□□□□□ -0.92
PCDHGA8-201ENST00000398604 ZNF815PA8K554 130 aa9.29□□□□□ -0.92
PCDHGA8-201ENST00000398604 RPL36AP83881 106 aaKnown RBP9.29□□□□□ -0.92
PCDHGA8-201ENST00000398604 SPINK13Q1W4C9 94 aa9.29□□□□□ -0.92
PCDHGA8-201ENST00000398604 C1orf122Q6ZSJ8 110 aa9.29□□□□□ -0.92
PCDHGA8-201ENST00000398604 TMEM256Q8N2U0 113 aa9.29□□□□□ -0.92
PCDHGA8-201ENST00000398604 RPL36ALQ969Q0 106 aaKnown RBP9.29□□□□□ -0.92
PCDHGA8-201ENST00000398604 TRBV7-1A0A0A6YYK4 115 aa9.29□□□□□ -0.92
PCDHGA8-201ENST00000398604 LOXP28300 417 aaPredicted RBP9.29□□□□□ -0.92
PCDHGA8-201ENST00000398604 FOXL2NBQ6ZUU3 175 aa9.29□□□□□ -0.92
PCDHGA8-201ENST00000398604 DAZ1Q9NQZ3 744 aaKnown RBP9.29□□□□□ -0.92
PCDHGA8-201ENST00000398604 PGPEP1Q9NXJ5 209 aa9.29□□□□□ -0.92
PCDHGA8-201ENST00000398604 TPSG1Q9NRR2 321 aa9.29□□□□□ -0.92
PCDHGA8-201ENST00000398604 PCDH15Q96QU1 1955 aa9.29□□□□□ -0.92
PCDHGA8-201ENST00000398604 DPM2O94777 84 aa9.28□□□□□ -0.92
PCDHGA8-201ENST00000398604 ASCL4Q6XD76 172 aa9.28□□□□□ -0.92
PCDHGA8-201ENST00000398604 AMN1Q8IY45 258 aa9.28□□□□□ -0.92
PCDHGA8-201ENST00000398604 USMG5Q96IX5 58 aa9.28□□□□□ -0.92
PCDHGA8-201ENST00000398604 TRBV6-6A0A0A6YYG2 114 aa9.28□□□□□ -0.92
PCDHGA8-201ENST00000398604 IGHV3-16A0A0C4DH30 117 aa9.28□□□□□ -0.92
PCDHGA8-201ENST00000398604 UBE2E1P51965 193 aa9.28□□□□□ -0.92
PCDHGA8-201ENST00000398604 ORMDL2Q53FV1 153 aa9.28□□□□□ -0.92
PCDHGA8-201ENST00000398604 SPCS1Q9Y6A9 102 aa9.28□□□□□ -0.92
PCDHGA8-201ENST00000398604 SH2D1AO60880 128 aa9.28□□□□□ -0.92
PCDHGA8-201ENST00000398604 IGHV4-39P01824 125 aa9.28□□□□□ -0.92
PCDHGA8-201ENST00000398604 ARMS2P0C7Q2 107 aa9.28□□□□□ -0.92
PCDHGA8-201ENST00000398604 NCOA6Q14686 2063 aaPredicted RBP9.28□□□□□ -0.92
PCDHGA8-201ENST00000398604 IGHV1-69DA0A0B4J2H0 117 aa9.28□□□□□ -0.92
PCDHGA8-201ENST00000398604 C10orf142B7Z368 130 aa9.28□□□□□ -0.92
PCDHGA8-201ENST00000398604 IGHV1-69P01742 117 aa9.28□□□□□ -0.92
PCDHGA8-201ENST00000398604 PCP4P48539 62 aa9.28□□□□□ -0.92
PCDHGA8-201ENST00000398604 TTC32Q5I0X7 151 aa9.28□□□□□ -0.92
PCDHGA8-201ENST00000398604 LAMTOR2Q9Y2Q5 125 aa9.28□□□□□ -0.92
PCDHGA8-201ENST00000398604 FLNBO75369 2602 aaKnown RBP9.28□□□□□ -0.92
PCDHGA8-201ENST00000398604 PRADC1Q9BSG0 188 aa9.27□□□□□ -0.92
PCDHGA8-201ENST00000398604 CHTOPQ9Y3Y2 248 aaKnown RBP9.27□□□□□ -0.92
PCDHGA8-201ENST00000398604 PYY3Q5JQD4 70 aa9.27□□□□□ -0.93
PCDHGA8-201ENST00000398604 ATP5L2Q7Z4Y8 100 aa9.27□□□□□ -0.93
PCDHGA8-201ENST00000398604 ZNF625Q96I27 306 aaPredicted RBP9.27□□□□□ -0.93
PCDHGA8-201ENST00000398604 PRRC2AP48634 2157 aaKnown RBP9.27□□□□□ -0.93
PCDHGA8-201ENST00000398604 TRAV9-1A0A075B6T8 112 aa9.27□□□□□ -0.93
PCDHGA8-201ENST00000398604 NRGNQ92686 78 aa9.27□□□□□ -0.93
PCDHGA8-201ENST00000398604 PAX4O43316 350 aa9.26□□□□□ -0.93
PCDHGA8-201ENST00000398604 TSPAN13O95857 204 aa9.26□□□□□ -0.93
PCDHGA8-201ENST00000398604 GATA4P43694 442 aa9.26□□□□□ -0.93
PCDHGA8-201ENST00000398604 ZNF134P52741 427 aa9.26□□□□□ -0.93
PCDHGA8-201ENST00000398604 SSBP2P81877 361 aaPredicted RBP9.26□□□□□ -0.93
PCDHGA8-201ENST00000398604 MED12LQ86YW9 2145 aa9.26□□□□□ -0.93
PCDHGA8-201ENST00000398604 NUP35Q8NFH5 326 aa9.26□□□□□ -0.93
PCDHGA8-201ENST00000398604 HIST1H2BLQ99880 126 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms