RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 Q8TCH9 128 aa9.1□□□□□ -0.95
TTC28-201ENST00000397906 ZNF833PQ6ZTB9 187 aa9.1□□□□□ -0.95
TTC28-201ENST00000397906 DMRT1Q9Y5R6 373 aa9.1□□□□□ -0.95
TTC28-201ENST00000397906 C17orf58Q2M2W7 97 aa9.1□□□□□ -0.95
TTC28-201ENST00000397906 VWC2LB2RUY7 222 aa9.1□□□□□ -0.95
TTC28-201ENST00000397906 PRIMA1Q86XR5 153 aa9.1□□□□□ -0.95
TTC28-201ENST00000397906 SPTBN1Q01082 2364 aaKnown RBP9.1□□□□□ -0.95
TTC28-201ENST00000397906 A0A0J9YY99 117 aa9.1□□□□□ -0.95
TTC28-201ENST00000397906 TRBV25-1A0A075B6N4 114 aa9.09□□□□□ -0.95
TTC28-201ENST00000397906 TRBV6-6A0A0A6YYG2 114 aa9.09□□□□□ -0.95
TTC28-201ENST00000397906 TMEM14EPQ6UXP3 125 aa9.09□□□□□ -0.95
TTC28-201ENST00000397906 C8orf86Q6ZUL3 223 aa9.09□□□□□ -0.95
TTC28-201ENST00000397906 TSSC4Q9Y5U2 329 aaPredicted RBP9.09□□□□□ -0.95
TTC28-201ENST00000397906 LEPROTO15243 131 aa9.09□□□□□ -0.95
TTC28-201ENST00000397906 VPREB3Q9UKI3 123 aa9.09□□□□□ -0.95
TTC28-201ENST00000397906 SPOCK3Q9BQ16 436 aa9.09□□□□□ -0.95
TTC28-201ENST00000397906 VWC2Q2TAL6 325 aa9.09□□□□□ -0.95
TTC28-201ENST00000397906 TRAV26-2A0A0B4J265 109 aa9.09□□□□□ -0.95
TTC28-201ENST00000397906 MMP23AO75900 390 aa9.09□□□□□ -0.95
TTC28-201ENST00000397906 SHISA9B4DS77 424 aa9.09□□□□□ -0.95
TTC28-201ENST00000397906 Q86TA4 180 aa9.09□□□□□ -0.95
TTC28-201ENST00000397906 NKAPP1Q8N9T2 125 aa9.09□□□□□ -0.95
TTC28-201ENST00000397906 ZNRF2Q8NHG8 242 aa9.09□□□□□ -0.95
TTC28-201ENST00000397906 CCL24O00175 119 aa9.08□□□□□ -0.96
TTC28-201ENST00000397906 FOXL2NBQ6ZUU3 175 aa9.08□□□□□ -0.96
TTC28-201ENST00000397906 THAP8Q8NA92 274 aa9.08□□□□□ -0.96
TTC28-201ENST00000397906 PFN2P35080 140 aa9.08□□□□□ -0.96
TTC28-201ENST00000397906 Q6ZRM9 215 aa9.08□□□□□ -0.96
TTC28-201ENST00000397906 TRPT1Q86TN4 253 aaKnown RBP9.08□□□□□ -0.96
TTC28-201ENST00000397906 IGKV1-39P01597 117 aa9.08□□□□□ -0.96
TTC28-201ENST00000397906 IGKV1D-39P04432 117 aa9.08□□□□□ -0.96
TTC28-201ENST00000397906 IGHV4-30-2A0A087WSY4 118 aa9.08□□□□□ -0.96
TTC28-201ENST00000397906 IGKV1-6A0A0C4DH72 117 aa9.08□□□□□ -0.96
TTC28-201ENST00000397906 IGHV2-5P01817 119 aa9.08□□□□□ -0.96
TTC28-201ENST00000397906 ANXA2RQ3ZCQ2 193 aa9.08□□□□□ -0.96
TTC28-201ENST00000397906 NDUFA4L2Q9NRX3 87 aa9.08□□□□□ -0.96
TTC28-201ENST00000397906 LYPD1Q8N2G4 141 aa9.08□□□□□ -0.96
TTC28-201ENST00000397906 TIMM21Q9BVV7 248 aa9.08□□□□□ -0.96
TTC28-201ENST00000397906 MBD3L1Q8WWY6 194 aa9.08□□□□□ -0.96
TTC28-201ENST00000397906 TRAV9-2A0A087WT02 112 aa9.08□□□□□ -0.96
TTC28-201ENST00000397906 SPAG8Q99932 426 aaPredicted RBP9.07□□□□□ -0.96
TTC28-201ENST00000397906 ERG28Q9UKR5 140 aa9.07□□□□□ -0.96
TTC28-201ENST00000397906 LINC01551Q86U37 167 aa9.07□□□□□ -0.96
TTC28-201ENST00000397906 ANAPC1Q9H1A4 1944 aa9.07□□□□□ -0.96
TTC28-201ENST00000397906 TMEM14BQ9NUH8 114 aa9.07□□□□□ -0.96
TTC28-201ENST00000397906 HIST1H2BKO60814 126 aa9.07□□□□□ -0.96
TTC28-201ENST00000397906 HIST1H2BJP06899 126 aa9.07□□□□□ -0.96
TTC28-201ENST00000397906 IGHV4-38-2P0DP08 117 aa9.07□□□□□ -0.96
TTC28-201ENST00000397906 HIST1H2BOP23527 126 aa9.07□□□□□ -0.96
TTC28-201ENST00000397906 HIST1H2BBP33778 126 aa9.07□□□□□ -0.96
TTC28-201ENST00000397906 HIST1H2BDP58876 126 aa9.07□□□□□ -0.96
TTC28-201ENST00000397906 HIST1H2BCP62807 126 aa9.07□□□□□ -0.96
TTC28-201ENST00000397906 HIST2H2BEQ16778 126 aa9.07□□□□□ -0.96
TTC28-201ENST00000397906 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.07□□□□□ -0.96
TTC28-201ENST00000397906 HIST1H2BHQ93079 126 aa9.07□□□□□ -0.96
TTC28-201ENST00000397906 HIST1H2BNQ99877 126 aa9.07□□□□□ -0.96
TTC28-201ENST00000397906 HIST1H2BMQ99879 126 aa9.07□□□□□ -0.96
TTC28-201ENST00000397906 NAA38Q9BRA0 125 aaKnown RBP9.07□□□□□ -0.96
TTC28-201ENST00000397906 Q9HAA7 133 aa9.07□□□□□ -0.96
TTC28-201ENST00000397906 TRAV8-4A0A0B4J246 113 aa9.07□□□□□ -0.96
TTC28-201ENST00000397906 TMEM213A2RRL7 107 aa9.07□□□□□ -0.96
TTC28-201ENST00000397906 CDKN1BP46527 198 aa9.07□□□□□ -0.96
TTC28-201ENST00000397906 ASPHD1Q5U4P2 390 aa9.07□□□□□ -0.96
TTC28-201ENST00000397906 SRSF8Q9BRL6 282 aaKnown RBP9.07□□□□□ -0.96
TTC28-201ENST00000397906 ADAMTS9Q9P2N4 1935 aa9.07□□□□□ -0.96
TTC28-201ENST00000397906 CXCL1P09341 107 aa9.07□□□□□ -0.96
TTC28-201ENST00000397906 TP53TG1Q9Y2A0 90 aa9.07□□□□□ -0.96
TTC28-201ENST00000397906 DKK4Q9UBT3 224 aa9.07□□□□□ -0.96
TTC28-201ENST00000397906 RASL11AQ6T310 242 aa9.06□□□□□ -0.96
TTC28-201ENST00000397906 PLXNA2O75051 1894 aa9.06□□□□□ -0.96
TTC28-201ENST00000397906 TMEM242Q9NWH2 141 aa9.06□□□□□ -0.96
TTC28-201ENST00000397906 ITGB1BP1O14713 200 aa9.06□□□□□ -0.96
TTC28-201ENST00000397906 HIST1H4AP62805 103 aaKnown RBP9.06□□□□□ -0.96
TTC28-201ENST00000397906 ATXN8Q156A1 80 aa9.06□□□□□ -0.96
TTC28-201ENST00000397906 FAM90A2PQ658T7 463 aa9.06□□□□□ -0.96
TTC28-201ENST00000397906 SPRNQ5BIV9 151 aa9.06□□□□□ -0.96
TTC28-201ENST00000397906 PFN1P07737 140 aaKnown RBP9.06□□□□□ -0.96
TTC28-201ENST00000397906 ZNF114Q8NC26 417 aa9.06□□□□□ -0.96
TTC28-201ENST00000397906 C5orf30Q96GV9 206 aa9.06□□□□□ -0.96
TTC28-201ENST00000397906 APRG1Q8IVJ8 170 aa9.06□□□□□ -0.96
TTC28-201ENST00000397906 NOP10Q9NPE3 64 aaKnown RBP9.06□□□□□ -0.96
TTC28-201ENST00000397906 ZNF407Q9C0G0 2248 aa9.06□□□□□ -0.96
TTC28-201ENST00000397906 IGHV4-61A0A0C4DH41 118 aa9.06□□□□□ -0.96
TTC28-201ENST00000397906 HOXD3P31249 432 aaPredicted RBP9.06□□□□□ -0.96
TTC28-201ENST00000397906 ZNF524Q96C55 264 aa9.06□□□□□ -0.96
TTC28-201ENST00000397906 NXPH4O95158 308 aa9.05□□□□□ -0.96
TTC28-201ENST00000397906 ANGP03950 147 aaKnown RBP9.05□□□□□ -0.96
TTC28-201ENST00000397906 SLURP1P55000 103 aa9.05□□□□□ -0.96
TTC28-201ENST00000397906 FHL1Q13642 323 aa9.05□□□□□ -0.96
TTC28-201ENST00000397906 NEGR1Q7Z3B1 354 aa9.05□□□□□ -0.96
TTC28-201ENST00000397906 LINC00587B1AMM8 73 aa9.05□□□□□ -0.96
TTC28-201ENST00000397906 SEC11AP67812 179 aa9.05□□□□□ -0.96
TTC28-201ENST00000397906 CLDN16Q9Y5I7 305 aa9.05□□□□□ -0.96
TTC28-201ENST00000397906 RPL32P62910 135 aaKnown RBP9.05□□□□□ -0.96
TTC28-201ENST00000397906 HAPLN4Q86UW8 402 aa9.05□□□□□ -0.96
TTC28-201ENST00000397906 NUP210Q8TEM1 1887 aaPredicted RBP9.05□□□□□ -0.96
TTC28-201ENST00000397906 IGKV2D-24A0A075B6R9 120 aa9.05□□□□□ -0.96
TTC28-201ENST00000397906 IGHV1OR15-1A0A075B7D0 117 aa9.05□□□□□ -0.96
TTC28-201ENST00000397906 hDV102S1A0JD36 115 aa9.05□□□□□ -0.96
TTC28-201ENST00000397906 C22orf46C9J442 243 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 180.5 ms