RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 TAX1BP3O14907 124 aa4.39□□□□□ -1.71
PTPRD-205ENST00000397611 CELA3BP08861 270 aa4.39□□□□□ -1.71
PTPRD-205ENST00000397611 ANKRD39Q53RE8 183 aa4.39□□□□□ -1.71
PTPRD-205ENST00000397611 BOD1L2Q8IYS8 172 aa4.39□□□□□ -1.71
PTPRD-205ENST00000397611 OR10J6PQ8NGY7 276 aa4.39□□□□□ -1.71
PTPRD-205ENST00000397611 TMEM14CQ9P0S9 112 aa4.39□□□□□ -1.71
PTPRD-205ENST00000397611 SMPXQ9UHP9 88 aa4.39□□□□□ -1.71
PTPRD-205ENST00000397611 A0A1B0GXF2 115 aa4.39□□□□□ -1.71
PTPRD-205ENST00000397611 H3BMG7 143 aa4.39□□□□□ -1.71
PTPRD-205ENST00000397611 TNFRSF6BO95407 300 aa4.39□□□□□ -1.71
PTPRD-205ENST00000397611 ZNF56Q15929 161 aa4.39□□□□□ -1.71
PTPRD-205ENST00000397611 KIR2DL4Q99706 377 aa4.39□□□□□ -1.71
PTPRD-205ENST00000397611 RANBP2P49792 3224 aaKnown RBP4.39□□□□□ -1.71
PTPRD-205ENST00000397611 PIEZO2Q9H5I5 2752 aa4.39□□□□□ -1.71
PTPRD-205ENST00000397611 SRRM4A7MD48 611 aaKnown RBP4.39□□□□□ -1.71
PTPRD-205ENST00000397611 GGTLC3B5MD39 225 aa4.39□□□□□ -1.71
PTPRD-205ENST00000397611 F8W1H4 67 aa4.39□□□□□ -1.71
PTPRD-205ENST00000397611 SRSF1Q07955 248 aaKnown RBP eCLIP4.39□□□□□ -1.71
PTPRD-205ENST00000397611 ZNF833PQ6ZTB9 187 aa4.39□□□□□ -1.71
PTPRD-205ENST00000397611 SPACA3Q8IXA5 215 aa4.39□□□□□ -1.71
PTPRD-205ENST00000397611 RAX2Q96IS3 184 aa4.39□□□□□ -1.71
PTPRD-205ENST00000397611 DIDO1Q9BTC0 2240 aaKnown RBP4.39□□□□□ -1.71
PTPRD-205ENST00000397611 IGHV1-18A0A0C4DH31 117 aa4.39□□□□□ -1.71
PTPRD-205ENST00000397611 TEX48A0A1B0GUV7 120 aa4.39□□□□□ -1.71
PTPRD-205ENST00000397611 COX6B1P14854 86 aa4.39□□□□□ -1.71
PTPRD-205ENST00000397611 EXOC3-AS1Q8N2X6 119 aa4.39□□□□□ -1.71
PTPRD-205ENST00000397611 NPFFR1Q9GZQ6 430 aa4.39□□□□□ -1.71
PTPRD-205ENST00000397611 RAB1BQ9H0U4 201 aa4.39□□□□□ -1.71
PTPRD-205ENST00000397611 MFAP4P55083 255 aa4.39□□□□□ -1.71
PTPRD-205ENST00000397611 ZCCHC24Q8N2G6 241 aaKnown RBP4.39□□□□□ -1.71
PTPRD-205ENST00000397611 C9orf106Q8NAJ2 232 aa4.39□□□□□ -1.71
PTPRD-205ENST00000397611 NXT2Q9NPJ8 142 aaKnown RBP4.39□□□□□ -1.71
PTPRD-205ENST00000397611 TP53TG3Q9ULZ0 132 aa4.39□□□□□ -1.71
PTPRD-205ENST00000397611 PIP4P1Q86T03 277 aa4.39□□□□□ -1.71
PTPRD-205ENST00000397611 NPIPB6E9PJ23 425 aa4.39□□□□□ -1.71
PTPRD-205ENST00000397611 PDE6HQ13956 83 aa4.39□□□□□ -1.71
PTPRD-205ENST00000397611 C17orf58Q2M2W7 97 aa4.39□□□□□ -1.71
PTPRD-205ENST00000397611 AMN1Q8IY45 258 aa4.39□□□□□ -1.71
PTPRD-205ENST00000397611 PPBPP02775 128 aa4.38□□□□□ -1.71
PTPRD-205ENST00000397611 NPC2P61916 151 aa4.38□□□□□ -1.71
PTPRD-205ENST00000397611 COX8CQ7Z4L0 72 aa4.38□□□□□ -1.71
PTPRD-205ENST00000397611 IGHV3-49A0A0A0MS15 119 aa4.38□□□□□ -1.71
PTPRD-205ENST00000397611 TRAV40A0A0B4J280 105 aa4.38□□□□□ -1.71
PTPRD-205ENST00000397611 CDX4O14627 284 aaPredicted RBP4.38□□□□□ -1.71
PTPRD-205ENST00000397611 IGLV2-8P01709 118 aa4.38□□□□□ -1.71
PTPRD-205ENST00000397611 ZNF134P52741 427 aa4.38□□□□□ -1.71
PTPRD-205ENST00000397611 SMIM20Q8N5G0 67 aa4.38□□□□□ -1.71
PTPRD-205ENST00000397611 C7orf69Q9H7B7 122 aa4.38□□□□□ -1.71
PTPRD-205ENST00000397611 ARMS2P0C7Q2 107 aa4.38□□□□□ -1.71
PTPRD-205ENST00000397611 C10orf55Q5SWW7 151 aa4.38□□□□□ -1.71
PTPRD-205ENST00000397611 TMEM158Q8WZ71 300 aa4.38□□□□□ -1.71
PTPRD-205ENST00000397611 ERG28Q9UKR5 140 aa4.38□□□□□ -1.71
PTPRD-205ENST00000397611 NCOR2Q9Y618 2525 aa4.38□□□□□ -1.71
PTPRD-205ENST00000397611 TRAV26-1A0A087WT03 109 aa4.38□□□□□ -1.71
PTPRD-205ENST00000397611 A0A1W2PNU3 283 aaPredicted RBP4.38□□□□□ -1.71
PTPRD-205ENST00000397611 OOSP1A8MZH6 123 aa4.38□□□□□ -1.71
PTPRD-205ENST00000397611 ASIPP42127 132 aa4.38□□□□□ -1.71
PTPRD-205ENST00000397611 MLANAQ16655 118 aa4.38□□□□□ -1.71
PTPRD-205ENST00000397611 LINC00173Q6ZV60 143 aa4.38□□□□□ -1.71
PTPRD-205ENST00000397611 Q86TA4 180 aa4.38□□□□□ -1.71
PTPRD-205ENST00000397611 TMEM105Q8N8V8 129 aa4.38□□□□□ -1.71
PTPRD-205ENST00000397611 IGF2BP2-AS1Q96M15 143 aa4.38□□□□□ -1.71
PTPRD-205ENST00000397611 C1QTNF4Q9BXJ3 329 aa4.38□□□□□ -1.71
PTPRD-205ENST00000397611 SHISA9B4DS77 424 aa4.38□□□□□ -1.71
PTPRD-205ENST00000397611 C9JAW5 83 aa4.38□□□□□ -1.71
PTPRD-205ENST00000397611 TOMM40O96008 361 aa4.38□□□□□ -1.71
PTPRD-205ENST00000397611 CRYBA4P53673 196 aa4.38□□□□□ -1.71
PTPRD-205ENST00000397611 FBXL15Q9H469 300 aa4.38□□□□□ -1.71
PTPRD-205ENST00000397611 TMEM213A2RRL7 107 aa4.38□□□□□ -1.71
PTPRD-205ENST00000397611 NDUFB8O95169 186 aa4.38□□□□□ -1.71
PTPRD-205ENST00000397611 C9orf153Q5TBE3 101 aa4.38□□□□□ -1.71
PTPRD-205ENST00000397611 PIFOQ8TCI5 191 aa4.38□□□□□ -1.71
PTPRD-205ENST00000397611 SPAG8Q99932 426 aaPredicted RBP4.38□□□□□ -1.71
PTPRD-205ENST00000397611 TNRC6BQ9UPQ9 1833 aaKnown RBP4.38□□□□□ -1.71
PTPRD-205ENST00000397611 IGKV1OR2-108A0A075B7D4 117 aa4.37□□□□□ -1.71
PTPRD-205ENST00000397611 IGKV2-40A0A087WW87 121 aaPredicted RBP4.37□□□□□ -1.71
PTPRD-205ENST00000397611 NKX2-8O15522 239 aa4.37□□□□□ -1.71
PTPRD-205ENST00000397611 IGKV2D-40P01614 121 aaPredicted RBP4.37□□□□□ -1.71
PTPRD-205ENST00000397611 LAGE3Q14657 143 aa4.37□□□□□ -1.71
PTPRD-205ENST00000397611 SH2D6Q7Z4S9 175 aa4.37□□□□□ -1.71
PTPRD-205ENST00000397611 GATD1Q8NB37 220 aa4.37□□□□□ -1.71
PTPRD-205ENST00000397611 TP73-AS1Q9UF72 201 aa4.37□□□□□ -1.71
PTPRD-205ENST00000397611 EDA2RQ9HAV5 297 aa4.37□□□□□ -1.71
PTPRD-205ENST00000397611 LRRK2Q5S007 2527 aa4.37□□□□□ -1.71
PTPRD-205ENST00000397611 K7EMI3 77 aa4.37□□□□□ -1.71
PTPRD-205ENST00000397611 PRB3Q04118 309 aaPredicted RBP4.37□□□□□ -1.71
PTPRD-205ENST00000397611 C2orf82Q6UX34 121 aa4.37□□□□□ -1.71
PTPRD-205ENST00000397611 PPDPFLQ8WWR9 84 aa4.37□□□□□ -1.71
PTPRD-205ENST00000397611 METTL26Q96S19 204 aa4.37□□□□□ -1.71
PTPRD-205ENST00000397611 ARFGEF3Q5TH69 2177 aa4.37□□□□□ -1.71
PTPRD-205ENST00000397611 SH2D1AO60880 128 aa4.37□□□□□ -1.71
PTPRD-205ENST00000397611 FRMD6-AS1P0C7T7 363 aa4.37□□□□□ -1.71
PTPRD-205ENST00000397611 IGFBPL1Q8WX77 278 aa4.37□□□□□ -1.71
PTPRD-205ENST00000397611 ZNF503Q96F45 646 aa4.37□□□□□ -1.71
PTPRD-205ENST00000397611 METRNQ9UJH8 293 aa4.37□□□□□ -1.71
PTPRD-205ENST00000397611 KIAA1549Q9HCM3 1950 aa4.37□□□□□ -1.71
PTPRD-205ENST00000397611 HIVEP2P31629 2446 aa4.37□□□□□ -1.71
PTPRD-205ENST00000397611 C17orf100A8MU93 164 aa4.37□□□□□ -1.71
PTPRD-205ENST00000397611 THBDP07204 575 aa4.37□□□□□ -1.71
PTPRD-205ENST00000397611 HOXB4P17483 251 aaPredicted RBP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms