RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 FAM74A3Q4VXF1 159 aa20.67■□□□□ 0.9
CPNE1-203ENST00000397442 ARL6IP6Q8N6S5 226 aa20.67■□□□□ 0.9
CPNE1-203ENST00000397442 C20orf173Q96LM9 149 aa20.67■□□□□ 0.9
CPNE1-203ENST00000397442 AKR1C3P42330 323 aa20.67■□□□□ 0.9
CPNE1-203ENST00000397442 LCN12Q6JVE5 192 aa20.67■□□□□ 0.9
CPNE1-203ENST00000397442 TMEM61Q8N0U2 210 aa20.67■□□□□ 0.9
CPNE1-203ENST00000397442 DYNLRB2Q8TF09 96 aa20.67■□□□□ 0.9
CPNE1-203ENST00000397442 TMEM158Q8WZ71 300 aa20.67■□□□□ 0.9
CPNE1-203ENST00000397442 KLF12Q9Y4X4 402 aa20.67■□□□□ 0.9
CPNE1-203ENST00000397442 TRAV34A0A0B4J273 112 aa20.66■□□□□ 0.9
CPNE1-203ENST00000397442 ISLRO14498 428 aa20.66■□□□□ 0.9
CPNE1-203ENST00000397442 GOLT1AQ6ZVE7 132 aa20.66■□□□□ 0.9
CPNE1-203ENST00000397442 PRELID1Q9Y255 219 aa20.66■□□□□ 0.9
CPNE1-203ENST00000397442 PSG3Q16557 428 aa20.65■□□□□ 0.9
CPNE1-203ENST00000397442 MRPL53Q96EL3 112 aaKnown RBP20.65■□□□□ 0.9
CPNE1-203ENST00000397442 NIPSNAP3BQ9BS92 247 aa20.65■□□□□ 0.9
CPNE1-203ENST00000397442 CLEC5AQ9NY25 188 aa20.65■□□□□ 0.9
CPNE1-203ENST00000397442 VWFP04275 2813 aa20.64■□□□□ 0.9
CPNE1-203ENST00000397442 K7EQG2 157 aa20.64■□□□□ 0.9
CPNE1-203ENST00000397442 CSN1S1P47710 185 aa20.64■□□□□ 0.9
CPNE1-203ENST00000397442 CNN1P51911 297 aaKnown RBP20.64■□□□□ 0.9
CPNE1-203ENST00000397442 CD300EQ496F6 205 aaPredicted RBP20.64■□□□□ 0.9
CPNE1-203ENST00000397442 WFDC3Q8IUB2 231 aa20.64■□□□□ 0.9
CPNE1-203ENST00000397442 PRAC2D3DTV9 90 aa20.64■□□□□ 0.89
CPNE1-203ENST00000397442 IGLV2-11P01706 119 aa20.64■□□□□ 0.89
CPNE1-203ENST00000397442 SGK494Q96LW2 274 aa20.64■□□□□ 0.89
CPNE1-203ENST00000397442 TRAV8-1A0A0A6YYK1 113 aa20.63■□□□□ 0.89
CPNE1-203ENST00000397442 TSPAN4O14817 238 aa20.63■□□□□ 0.89
CPNE1-203ENST00000397442 TFPI2P48307 235 aa20.63■□□□□ 0.89
CPNE1-203ENST00000397442 TMEM183BQ1AE95 376 aa20.63■□□□□ 0.89
CPNE1-203ENST00000397442 TMEM241Q24JQ0 296 aa20.63■□□□□ 0.89
CPNE1-203ENST00000397442 SAMD13Q5VXD3 122 aa20.63■□□□□ 0.89
CPNE1-203ENST00000397442 FAM24BQ8N5W8 94 aa20.63■□□□□ 0.89
CPNE1-203ENST00000397442 IGF2BP2-AS1Q96M15 143 aa20.63■□□□□ 0.89
CPNE1-203ENST00000397442 SDF2L1Q9HCN8 221 aa20.63■□□□□ 0.89
CPNE1-203ENST00000397442 NAT8Q9UHE5 227 aa20.63■□□□□ 0.89
CPNE1-203ENST00000397442 PGPEP1LA6NFU8 196 aa20.62■□□□□ 0.89
CPNE1-203ENST00000397442 C9JCJ5 164 aa20.62■□□□□ 0.89
CPNE1-203ENST00000397442 SVBPQ8N300 66 aa20.62■□□□□ 0.89
CPNE1-203ENST00000397442 SPATA3Q8NHX4 192 aa20.62■□□□□ 0.89
CPNE1-203ENST00000397442 IGKV2-40A0A087WW87 121 aaPredicted RBP20.61■□□□□ 0.89
CPNE1-203ENST00000397442 DNASE2O00115 360 aaPredicted RBP20.61■□□□□ 0.89
CPNE1-203ENST00000397442 SAP30O75446 220 aa20.61■□□□□ 0.89
CPNE1-203ENST00000397442 IGKV2D-40P01614 121 aaPredicted RBP20.61■□□□□ 0.89
CPNE1-203ENST00000397442 TAS2R60P59551 318 aa20.61■□□□□ 0.89
CPNE1-203ENST00000397442 CENPWQ5EE01 88 aa20.61■□□□□ 0.89
CPNE1-203ENST00000397442 RBPMS2Q6ZRY4 209 aaKnown RBP20.61■□□□□ 0.89
CPNE1-203ENST00000397442 C3orf56Q8N813 242 aa20.61■□□□□ 0.89
CPNE1-203ENST00000397442 FMC1Q96HJ9 113 aa20.61■□□□□ 0.89
CPNE1-203ENST00000397442 SERTM2A0A1B0GWG4 89 aa20.6■□□□□ 0.89
CPNE1-203ENST00000397442 IZUMO1RA6ND01 250 aa20.6■□□□□ 0.89
CPNE1-203ENST00000397442 C12orf54Q6X4T0 127 aa20.6■□□□□ 0.89
CPNE1-203ENST00000397442 TMEM75Q8N9X5 138 aa20.6■□□□□ 0.89
CPNE1-203ENST00000397442 TVP23CQ96ET8 276 aa20.6■□□□□ 0.89
CPNE1-203ENST00000397442 UBE2G1P62253 170 aa20.59■□□□□ 0.89
CPNE1-203ENST00000397442 PAFAH1B2P68402 229 aa20.59■□□□□ 0.89
CPNE1-203ENST00000397442 STAB1Q9NY15 2570 aa20.59■□□□□ 0.89
CPNE1-203ENST00000397442 TRAV2A0A0B4J234 112 aa20.58■□□□□ 0.89
CPNE1-203ENST00000397442 TRAV25A0A0B4J276 109 aa20.58■□□□□ 0.89
CPNE1-203ENST00000397442 K7EQM0 130 aa20.58■□□□□ 0.89
CPNE1-203ENST00000397442 IGLV1-51P01701 117 aa20.58■□□□□ 0.89
CPNE1-203ENST00000397442 IGLV2-8P01709 118 aa20.58■□□□□ 0.89
CPNE1-203ENST00000397442 S100A9P06702 114 aaKnown RBP20.58■□□□□ 0.89
CPNE1-203ENST00000397442 ID1P41134 155 aa20.58■□□□□ 0.89
CPNE1-203ENST00000397442 GNG4P50150 75 aa20.58■□□□□ 0.89
CPNE1-203ENST00000397442 RPL23P62829 140 aaKnown RBP20.58■□□□□ 0.89
CPNE1-203ENST00000397442 ATRAIDQ6UW56 229 aa20.58■□□□□ 0.89
CPNE1-203ENST00000397442 LINC01551Q86U37 167 aa20.58■□□□□ 0.89
CPNE1-203ENST00000397442 CLRN3Q8NCR9 226 aa20.58■□□□□ 0.89
CPNE1-203ENST00000397442 ZNF738Q8NE65 137 aa20.58■□□□□ 0.89
CPNE1-203ENST00000397442 COL6A5A8TX70 2615 aa20.58■□□□□ 0.88
CPNE1-203ENST00000397442 OCC1Q8TAD7 63 aa20.58■□□□□ 0.88
CPNE1-203ENST00000397442 VGLL1Q99990 258 aa20.58■□□□□ 0.88
CPNE1-203ENST00000397442 AURKAIP1Q9NWT8 199 aaPredicted RBP20.58■□□□□ 0.88
CPNE1-203ENST00000397442 TRBV6-1A0A0K0K1D8 114 aa20.57■□□□□ 0.88
CPNE1-203ENST00000397442 DEFB1P60022 68 aa20.57■□□□□ 0.88
CPNE1-203ENST00000397442 SHISA2Q6UWI4 295 aa20.57■□□□□ 0.88
CPNE1-203ENST00000397442 Q86TA4 180 aa20.57■□□□□ 0.88
CPNE1-203ENST00000397442 RBAKDNA6NC62 111 aa20.56■□□□□ 0.88
CPNE1-203ENST00000397442 LTAP01374 205 aa20.56■□□□□ 0.88
CPNE1-203ENST00000397442 ZNF688P0C7X2 276 aa20.56■□□□□ 0.88
CPNE1-203ENST00000397442 FLI1Q01543 452 aaPredicted RBP20.56■□□□□ 0.88
CPNE1-203ENST00000397442 PNRC1Q12796 327 aaPredicted RBP20.56■□□□□ 0.88
CPNE1-203ENST00000397442 SPAG8Q99932 426 aaPredicted RBP20.56■□□□□ 0.88
CPNE1-203ENST00000397442 ZNF256Q9Y2P7 627 aaPredicted RBP20.56■□□□□ 0.88
CPNE1-203ENST00000397442 LY96Q9Y6Y9 160 aa20.56■□□□□ 0.88
CPNE1-203ENST00000397442 SNAPINO95295 136 aa20.55■□□□□ 0.88
CPNE1-203ENST00000397442 BAGE2Q86Y30 109 aa20.55■□□□□ 0.88
CPNE1-203ENST00000397442 PSG8Q9UQ74 426 aa20.55■□□□□ 0.88
CPNE1-203ENST00000397442 K7EN84 100 aa20.54■□□□□ 0.88
CPNE1-203ENST00000397442 M0R036 132 aa20.54■□□□□ 0.88
CPNE1-203ENST00000397442 SNRPD3P62318 126 aaKnown RBP20.54■□□□□ 0.88
CPNE1-203ENST00000397442 ERCC8Q13216 396 aa20.54■□□□□ 0.88
CPNE1-203ENST00000397442 ADIRFQ15847 76 aa20.54■□□□□ 0.88
CPNE1-203ENST00000397442 SORL1Q92673 2214 aa20.54■□□□□ 0.88
CPNE1-203ENST00000397442 PSMG4Q5JS54 123 aa20.54■□□□□ 0.88
CPNE1-203ENST00000397442 PRNTQ86SH4 94 aa20.54■□□□□ 0.88
CPNE1-203ENST00000397442 NHLRC2Q8NBF2 726 aa20.54■□□□□ 0.88
CPNE1-203ENST00000397442 ASCL2Q99929 193 aa20.54■□□□□ 0.88
CPNE1-203ENST00000397442 MLST8Q9BVC4 326 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms