RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 TRPT1Q86TN4 253 aaKnown RBP8.49□□□□□ -1.05
COL4A4-201ENST00000396625 LHBP01229 141 aa8.48□□□□□ -1.05
COL4A4-201ENST00000396625 A0A1W2PPM0 123 aa8.48□□□□□ -1.05
COL4A4-201ENST00000396625 J3KT08 172 aa8.48□□□□□ -1.05
COL4A4-201ENST00000396625 K7ERJ3 54 aa8.48□□□□□ -1.05
COL4A4-201ENST00000396625 LINC00271P0C7V0 271 aa8.48□□□□□ -1.05
COL4A4-201ENST00000396625 ETDBQ3ZM63 59 aa8.48□□□□□ -1.05
COL4A4-201ENST00000396625 RS1O15537 224 aa8.48□□□□□ -1.05
COL4A4-201ENST00000396625 CEND1Q8N111 149 aa8.48□□□□□ -1.05
COL4A4-201ENST00000396625 LINC00477Q96M19 166 aa8.48□□□□□ -1.05
COL4A4-201ENST00000396625 ABCA2Q9BZC7 2435 aa8.48□□□□□ -1.05
COL4A4-201ENST00000396625 C17orf100A8MU93 164 aa8.48□□□□□ -1.05
COL4A4-201ENST00000396625 PSG7Q13046 419 aa8.48□□□□□ -1.05
COL4A4-201ENST00000396625 CHCHD2Q9Y6H1 151 aaPredicted RBP8.48□□□□□ -1.05
COL4A4-201ENST00000396625 CDKN1BP46527 198 aa8.48□□□□□ -1.05
COL4A4-201ENST00000396625 SUPT4H1P63272 117 aaKnown RBP8.48□□□□□ -1.05
COL4A4-201ENST00000396625 CGB3P0DN86 165 aa8.48□□□□□ -1.05
COL4A4-201ENST00000396625 CRYBA4P53673 196 aa8.48□□□□□ -1.05
COL4A4-201ENST00000396625 SYNJ2BPP57105 145 aa8.48□□□□□ -1.05
COL4A4-201ENST00000396625 C4orf51C9J302 202 aa8.47□□□□□ -1.05
COL4A4-201ENST00000396625 POLR3KQ9Y2Y1 108 aaPredicted RBP8.47□□□□□ -1.05
COL4A4-201ENST00000396625 HLA-DMBP28068 263 aa8.47□□□□□ -1.05
COL4A4-201ENST00000396625 C20orf144Q9BQM9 153 aa8.47□□□□□ -1.05
COL4A4-201ENST00000396625 LAIR2Q6ISS4 152 aa8.47□□□□□ -1.05
COL4A4-201ENST00000396625 RFPL3SP0C7P2 107 aa8.47□□□□□ -1.05
COL4A4-201ENST00000396625 DEFB130BP0DP73 79 aa8.47□□□□□ -1.05
COL4A4-201ENST00000396625 DEFB130AP0DP74 79 aa8.47□□□□□ -1.05
COL4A4-201ENST00000396625 LIME1Q9H400 295 aa8.47□□□□□ -1.05
COL4A4-201ENST00000396625 TNS1Q9HBL0 1735 aaKnown RBP8.47□□□□□ -1.05
COL4A4-201ENST00000396625 LOC102723996A0A087X1L8 192 aa8.47□□□□□ -1.05
COL4A4-201ENST00000396625 I3L3M4 83 aa8.47□□□□□ -1.05
COL4A4-201ENST00000396625 GAS1P54826 345 aa8.47□□□□□ -1.05
COL4A4-201ENST00000396625 FAM166AQ6J272 317 aa8.47□□□□□ -1.05
COL4A4-201ENST00000396625 C19orf48Q6RUI8 117 aa8.47□□□□□ -1.05
COL4A4-201ENST00000396625 OR11H6Q8NGC7 330 aa8.47□□□□□ -1.05
COL4A4-201ENST00000396625 ZNF329Q86UD4 541 aa8.47□□□□□ -1.05
COL4A4-201ENST00000396625 B5MCH6 92 aa8.46□□□□□ -1.05
COL4A4-201ENST00000396625 NOTCH4Q99466 2003 aa8.46□□□□□ -1.05
COL4A4-201ENST00000396625 TRBV25-1A0A075B6N4 114 aa8.46□□□□□ -1.05
COL4A4-201ENST00000396625 FAM27E3Q08E93 113 aa8.46□□□□□ -1.05
COL4A4-201ENST00000396625 LY96Q9Y6Y9 160 aa8.46□□□□□ -1.05
COL4A4-201ENST00000396625 CCDC168Q8NDH2 2452 aa8.46□□□□□ -1.05
COL4A4-201ENST00000396625 CGB7P0DN87 165 aa8.46□□□□□ -1.05
COL4A4-201ENST00000396625 IGHV1-2P23083 117 aa8.46□□□□□ -1.05
COL4A4-201ENST00000396625 A0A1B0GWJ7 208 aa8.46□□□□□ -1.05
COL4A4-201ENST00000396625 CELA3AP09093 270 aa8.46□□□□□ -1.06
COL4A4-201ENST00000396625 KLF5Q13887 457 aaPredicted RBP8.46□□□□□ -1.06
COL4A4-201ENST00000396625 VMO1Q7Z5L0 202 aa8.46□□□□□ -1.06
COL4A4-201ENST00000396625 RNASE2P10153 161 aaKnown RBP8.46□□□□□ -1.06
COL4A4-201ENST00000396625 MSRB2Q9Y3D2 182 aa8.46□□□□□ -1.06
COL4A4-201ENST00000396625 NPSP0C0P6 89 aa8.45□□□□□ -1.06
COL4A4-201ENST00000396625 CFHR2P36980 270 aa8.45□□□□□ -1.06
COL4A4-201ENST00000396625 THBDP07204 575 aa8.45□□□□□ -1.06
COL4A4-201ENST00000396625 SLC25A45Q8N413 288 aa8.45□□□□□ -1.06
COL4A4-201ENST00000396625 KLHDC3Q9BQ90 382 aa8.45□□□□□ -1.06
COL4A4-201ENST00000396625 PRO1854Q9UHT4 67 aa8.45□□□□□ -1.06
COL4A4-201ENST00000396625 IGHV2-26A0A0B4J1V2 119 aa8.45□□□□□ -1.06
COL4A4-201ENST00000396625 SLC25A16P16260 332 aa8.45□□□□□ -1.06
COL4A4-201ENST00000396625 C8orf31Q8N9H6 132 aa8.45□□□□□ -1.06
COL4A4-201ENST00000396625 DEFB121Q5J5C9 76 aa8.45□□□□□ -1.06
COL4A4-201ENST00000396625 SRSF8Q9BRL6 282 aaKnown RBP8.45□□□□□ -1.06
COL4A4-201ENST00000396625 C22orf46C9J442 243 aa8.45□□□□□ -1.06
COL4A4-201ENST00000396625 C2CD3Q4AC94 2353 aa8.45□□□□□ -1.06
COL4A4-201ENST00000396625 H3BMG7 143 aa8.45□□□□□ -1.06
COL4A4-201ENST00000396625 C9orf139Q6ZV77 190 aa8.45□□□□□ -1.06
COL4A4-201ENST00000396625 Q86TA4 180 aa8.45□□□□□ -1.06
COL4A4-201ENST00000396625 TMEM75Q8N9X5 138 aa8.45□□□□□ -1.06
COL4A4-201ENST00000396625 C15orf53Q8NAA6 179 aa8.45□□□□□ -1.06
COL4A4-201ENST00000396625 SHISA3A0PJX4 238 aa8.45□□□□□ -1.06
COL4A4-201ENST00000396625 RHODO00212 210 aa8.45□□□□□ -1.06
COL4A4-201ENST00000396625 UBE2E2Q96LR5 201 aa8.45□□□□□ -1.06
COL4A4-201ENST00000396625 TFF1P04155 84 aa8.44□□□□□ -1.06
COL4A4-201ENST00000396625 CTHRC1Q96CG8 243 aa8.44□□□□□ -1.06
COL4A4-201ENST00000396625 ORMDL1Q9P0S3 153 aa8.44□□□□□ -1.06
COL4A4-201ENST00000396625 METRNQ9UJH8 293 aa8.44□□□□□ -1.06
COL4A4-201ENST00000396625 H0YIZ8 118 aa8.44□□□□□ -1.06
COL4A4-201ENST00000396625 KLHL30-AS1Q8NEE0 82 aa8.44□□□□□ -1.06
COL4A4-201ENST00000396625 C14orf132Q9NPU4 83 aa8.44□□□□□ -1.06
COL4A4-201ENST00000396625 MDS2Q8NDY4 140 aa8.44□□□□□ -1.06
COL4A4-201ENST00000396625 FAM223BA6NKX1 122 aa8.44□□□□□ -1.06
COL4A4-201ENST00000396625 FAM223AQ8IWN6 122 aa8.44□□□□□ -1.06
COL4A4-201ENST00000396625 IL17RELQ6ZVW7 336 aa8.44□□□□□ -1.06
COL4A4-201ENST00000396625 IGHV1-24A0A0C4DH33 117 aa8.44□□□□□ -1.06
COL4A4-201ENST00000396625 CTSBP07858 339 aa8.44□□□□□ -1.06
COL4A4-201ENST00000396625 LYPD1Q8N2G4 141 aa8.44□□□□□ -1.06
COL4A4-201ENST00000396625 PRSS29PA6NIE9 313 aa8.43□□□□□ -1.06
COL4A4-201ENST00000396625 F6UB75 175 aa8.43□□□□□ -1.06
COL4A4-201ENST00000396625 CLPSP04118 112 aa8.43□□□□□ -1.06
COL4A4-201ENST00000396625 C5orf67F2Z3F1 127 aa8.43□□□□□ -1.06
COL4A4-201ENST00000396625 IGLC2P0DOY2 106 aa8.43□□□□□ -1.06
COL4A4-201ENST00000396625 IGLC3P0DOY3 106 aa8.43□□□□□ -1.06
COL4A4-201ENST00000396625 FAM104BQ5XKR9 115 aa8.43□□□□□ -1.06
COL4A4-201ENST00000396625 DKK1O94907 266 aa8.43□□□□□ -1.06
COL4A4-201ENST00000396625 MP68P56378 58 aa8.43□□□□□ -1.06
COL4A4-201ENST00000396625 SMIM20Q8N5G0 67 aa8.43□□□□□ -1.06
COL4A4-201ENST00000396625 SPATA25Q9BR10 227 aa8.43□□□□□ -1.06
COL4A4-201ENST00000396625 LINC00527Q9UJ94 153 aa8.43□□□□□ -1.06
COL4A4-201ENST00000396625 KNCNA6PVL3 124 aa8.43□□□□□ -1.06
COL4A4-201ENST00000396625 FNDC10F2Z333 226 aa8.43□□□□□ -1.06
COL4A4-201ENST00000396625 F5H768 121 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms