RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 VAMP3Q15836 100 aa12.27□□□□□ -0.45
HOXA3-202ENST00000396352 SERTM2A0A1B0GWG4 89 aa12.27□□□□□ -0.45
HOXA3-202ENST00000396352 OR2T8A6NH00 312 aa12.27□□□□□ -0.45
HOXA3-202ENST00000396352 LOC389332A0A1B0GUA5 103 aa12.26□□□□□ -0.45
HOXA3-202ENST00000396352 CEACAM3P40198 252 aa12.26□□□□□ -0.45
HOXA3-202ENST00000396352 PAX8Q06710 450 aa12.26□□□□□ -0.45
HOXA3-202ENST00000396352 OR4C5Q8NGB2 326 aa12.26□□□□□ -0.45
HOXA3-202ENST00000396352 PSG9Q00887 426 aa12.26□□□□□ -0.45
HOXA3-202ENST00000396352 HES1Q14469 280 aa12.26□□□□□ -0.45
HOXA3-202ENST00000396352 S100A7AQ86SG5 101 aa12.26□□□□□ -0.45
HOXA3-202ENST00000396352 TTC9CQ8N5M4 171 aa12.26□□□□□ -0.45
HOXA3-202ENST00000396352 ARPC1AQ92747 370 aa12.26□□□□□ -0.45
HOXA3-202ENST00000396352 PRELID3AQ96N28 172 aa12.26□□□□□ -0.45
HOXA3-202ENST00000396352 A0A1W2PRD5 423 aa12.26□□□□□ -0.45
HOXA3-202ENST00000396352 A0A1W2PRF3 423 aa12.26□□□□□ -0.45
HOXA3-202ENST00000396352 A0A1W2PRM7 423 aa12.26□□□□□ -0.45
HOXA3-202ENST00000396352 GPR183P32249 361 aa12.26□□□□□ -0.45
HOXA3-202ENST00000396352 ZNF562Q6V9R5 426 aa12.26□□□□□ -0.45
HOXA3-202ENST00000396352 ZNF575Q86XF7 245 aa12.26□□□□□ -0.45
HOXA3-202ENST00000396352 PRR25Q96S07 402 aa12.26□□□□□ -0.45
HOXA3-202ENST00000396352 FAM90A27PA6NNH2 459 aa12.25□□□□□ -0.45
HOXA3-202ENST00000396352 IGHV3-23P01764 117 aa12.25□□□□□ -0.45
HOXA3-202ENST00000396352 EGR2P11161 476 aaPredicted RBP12.25□□□□□ -0.45
HOXA3-202ENST00000396352 MRPL51Q4U2R6 128 aaKnown RBP12.25□□□□□ -0.45
HOXA3-202ENST00000396352 ORMDL3Q8N138 153 aa12.25□□□□□ -0.45
HOXA3-202ENST00000396352 C21orf62Q9NYP8 219 aa12.25□□□□□ -0.45
HOXA3-202ENST00000396352 ANKHD1Q8IWZ3 2542 aaKnown RBP12.25□□□□□ -0.45
HOXA3-202ENST00000396352 IGHG4P01861 327 aa12.25□□□□□ -0.45
HOXA3-202ENST00000396352 FGF6P10767 208 aa12.25□□□□□ -0.45
HOXA3-202ENST00000396352 DYNAPQ8N1N2 210 aa12.25□□□□□ -0.45
HOXA3-202ENST00000396352 TLN1Q9Y490 2541 aaKnown RBP12.25□□□□□ -0.45
HOXA3-202ENST00000396352 M0R1W7 72 aa12.24□□□□□ -0.45
HOXA3-202ENST00000396352 ZNF80P51504 273 aaPredicted RBP12.24□□□□□ -0.45
HOXA3-202ENST00000396352 OR8A1Q8NGG7 326 aa12.24□□□□□ -0.45
HOXA3-202ENST00000396352 SMAD5-AS1Q9Y6J3 95 aa12.24□□□□□ -0.45
HOXA3-202ENST00000396352 Q8TAT8 98 aa12.24□□□□□ -0.45
HOXA3-202ENST00000396352 PSMG3-AS1Q96PY0 264 aa12.24□□□□□ -0.45
HOXA3-202ENST00000396352 SNAI2O43623 268 aa12.24□□□□□ -0.45
HOXA3-202ENST00000396352 CD5LO43866 347 aa12.24□□□□□ -0.45
HOXA3-202ENST00000396352 PRTN3P24158 256 aa12.24□□□□□ -0.45
HOXA3-202ENST00000396352 ANKRD39Q53RE8 183 aa12.24□□□□□ -0.45
HOXA3-202ENST00000396352 SAPCD1Q5SSQ6 148 aa12.24□□□□□ -0.45
HOXA3-202ENST00000396352 RPL7P18124 248 aaKnown RBP12.23□□□□□ -0.45
HOXA3-202ENST00000396352 FBXL19-AS1Q494R0 122 aa12.23□□□□□ -0.45
HOXA3-202ENST00000396352 Q8N6K4 173 aa12.23□□□□□ -0.45
HOXA3-202ENST00000396352 ARL6IP6Q8N6S5 226 aa12.23□□□□□ -0.45
HOXA3-202ENST00000396352 DPF1Q92782 380 aa12.23□□□□□ -0.45
HOXA3-202ENST00000396352 VGLL1Q99990 258 aa12.23□□□□□ -0.45
HOXA3-202ENST00000396352 CBY3A6NI87 242 aa12.23□□□□□ -0.45
HOXA3-202ENST00000396352 FXYD7P58549 80 aa12.23□□□□□ -0.45
HOXA3-202ENST00000396352 CTSGP08311 255 aa12.22□□□□□ -0.45
HOXA3-202ENST00000396352 PCP4P48539 62 aa12.22□□□□□ -0.45
HOXA3-202ENST00000396352 IGLC6P0CF74 106 aa12.22□□□□□ -0.45
HOXA3-202ENST00000396352 LGALS9BQ3B8N2 356 aa12.22□□□□□ -0.45
HOXA3-202ENST00000396352 IGFL4Q6B9Z1 124 aa12.22□□□□□ -0.45
HOXA3-202ENST00000396352 LGALS9CQ6DKI2 356 aa12.22□□□□□ -0.45
HOXA3-202ENST00000396352 SMKR1H3BMG3 65 aa12.22□□□□□ -0.45
HOXA3-202ENST00000396352 NPYP01303 97 aa12.22□□□□□ -0.45
HOXA3-202ENST00000396352 HLA-DMBP28068 263 aa12.22□□□□□ -0.45
HOXA3-202ENST00000396352 NCBP2LA6PVI3 153 aaKnown RBP12.21□□□□□ -0.45
HOXA3-202ENST00000396352 FER1L6-AS1Q8NA97 138 aa12.21□□□□□ -0.45
HOXA3-202ENST00000396352 ABCA4P78363 2273 aa12.21□□□□□ -0.45
HOXA3-202ENST00000396352 CDSNQ15517 529 aa12.21□□□□□ -0.45
HOXA3-202ENST00000396352 AMMECR1LQ6DCA0 310 aa12.21□□□□□ -0.45
HOXA3-202ENST00000396352 HBDP02042 147 aa12.21□□□□□ -0.46
HOXA3-202ENST00000396352 CACNG7P62955 275 aa12.21□□□□□ -0.46
HOXA3-202ENST00000396352 TIMD4Q96H15 378 aa12.21□□□□□ -0.46
HOXA3-202ENST00000396352 K7ENP7 123 aa12.2□□□□□ -0.46
HOXA3-202ENST00000396352 RPS20P60866 119 aaKnown RBP12.2□□□□□ -0.46
HOXA3-202ENST00000396352 TWIST1Q15672 202 aa12.2□□□□□ -0.46
HOXA3-202ENST00000396352 VMO1Q7Z5L0 202 aa12.2□□□□□ -0.46
HOXA3-202ENST00000396352 THYN1Q9P016 225 aa12.2□□□□□ -0.46
HOXA3-202ENST00000396352 RABAC1Q9UI14 185 aa12.2□□□□□ -0.46
HOXA3-202ENST00000396352 SVEP1Q4LDE5 3571 aa12.2□□□□□ -0.46
HOXA3-202ENST00000396352 SPTBN2O15020 2390 aa12.2□□□□□ -0.46
HOXA3-202ENST00000396352 FBLL1A6NHQ2 334 aaKnown RBP12.2□□□□□ -0.46
HOXA3-202ENST00000396352 CDKN1BP46527 198 aa12.2□□□□□ -0.46
HOXA3-202ENST00000396352 CEP295Q9C0D2 2601 aa12.19□□□□□ -0.46
HOXA3-202ENST00000396352 TRAV8-6A0A0B4J262 113 aa12.19□□□□□ -0.46
HOXA3-202ENST00000396352 CKS2P33552 79 aa12.19□□□□□ -0.46
HOXA3-202ENST00000396352 NHLH1Q02575 133 aa12.19□□□□□ -0.46
HOXA3-202ENST00000396352 OR1N2Q8NGR9 330 aa12.19□□□□□ -0.46
HOXA3-202ENST00000396352 EBI3Q14213 229 aa12.19□□□□□ -0.46
HOXA3-202ENST00000396352 TMEM97Q5BJF2 176 aa12.19□□□□□ -0.46
HOXA3-202ENST00000396352 IGHV3OR16-8A0A075B7F1 116 aa12.19□□□□□ -0.46
HOXA3-202ENST00000396352 IGHV7-81A0A0B4J1V7 117 aa12.19□□□□□ -0.46
HOXA3-202ENST00000396352 BMI1P35226 326 aa12.19□□□□□ -0.46
HOXA3-202ENST00000396352 C11orf71Q6IPW1 123 aa12.19□□□□□ -0.46
HOXA3-202ENST00000396352 BOD1L2Q8IYS8 172 aa12.19□□□□□ -0.46
HOXA3-202ENST00000396352 RNF185Q96GF1 192 aa12.19□□□□□ -0.46
HOXA3-202ENST00000396352 MSRB1Q9NZV6 116 aa12.19□□□□□ -0.46
HOXA3-202ENST00000396352 SRSF2Q01130 221 aaKnown RBP12.18□□□□□ -0.46
HOXA3-202ENST00000396352 CCDC144NLQ6NUI1 221 aa12.18□□□□□ -0.46
HOXA3-202ENST00000396352 CNFNQ9BYD5 112 aa12.18□□□□□ -0.46
HOXA3-202ENST00000396352 C7orf71A4D174 169 aa12.17□□□□□ -0.46
HOXA3-202ENST00000396352 SEC11AP67812 179 aa12.17□□□□□ -0.46
HOXA3-202ENST00000396352 IFI27L1Q96BM0 104 aa12.17□□□□□ -0.46
HOXA3-202ENST00000396352 NPFFR1Q9GZQ6 430 aa12.17□□□□□ -0.46
HOXA3-202ENST00000396352 ASH1LQ9NR48 2969 aaKnown RBP12.17□□□□□ -0.46
HOXA3-202ENST00000396352 IGHV3-35A0A0C4DH35 117 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms