RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 RNF141Q8WVD5 230 aa11.5□□□□□ -0.57
DDR1-229ENST00000396342 ZNF503Q96F45 646 aa11.5□□□□□ -0.57
DDR1-229ENST00000396342 ODF3Q96PU9 254 aa11.5□□□□□ -0.57
DDR1-229ENST00000396342 MGST2Q99735 147 aa11.5□□□□□ -0.57
DDR1-229ENST00000396342 PRELID1Q9Y255 219 aa11.5□□□□□ -0.57
DDR1-229ENST00000396342 TRAV26-1A0A087WT03 109 aa11.49□□□□□ -0.57
DDR1-229ENST00000396342 H3BTX0 84 aa11.49□□□□□ -0.57
DDR1-229ENST00000396342 CCSO14618 274 aa11.49□□□□□ -0.57
DDR1-229ENST00000396342 SULT1A1P50225 295 aa11.49□□□□□ -0.57
DDR1-229ENST00000396342 ATP6V1FQ16864 119 aa11.49□□□□□ -0.57
DDR1-229ENST00000396342 ZNF680Q8NEM1 530 aa11.49□□□□□ -0.57
DDR1-229ENST00000396342 ZNRF2Q8NHG8 242 aa11.49□□□□□ -0.57
DDR1-229ENST00000396342 RXFP4Q8TDU9 374 aa11.49□□□□□ -0.57
DDR1-229ENST00000396342 C2orf50Q96LR7 162 aa11.49□□□□□ -0.57
DDR1-229ENST00000396342 RBM38Q9H0Z9 239 aaKnown RBP11.49□□□□□ -0.57
DDR1-229ENST00000396342 NDUFA13Q9P0J0 144 aa11.49□□□□□ -0.57
DDR1-229ENST00000396342 DNAH10Q8IVF4 4471 aa11.49□□□□□ -0.57
DDR1-229ENST00000396342 TRAV6A0A075B6T7 132 aa11.48□□□□□ -0.57
DDR1-229ENST00000396342 TRAV12-3A0A0B4J271 114 aa11.48□□□□□ -0.57
DDR1-229ENST00000396342 MRPS12O15235 138 aaKnown RBP11.48□□□□□ -0.57
DDR1-229ENST00000396342 ZNF253O75346 499 aa11.48□□□□□ -0.57
DDR1-229ENST00000396342 MPDU1O75352 247 aa11.48□□□□□ -0.57
DDR1-229ENST00000396342 TCRBP04435 133 aa11.48□□□□□ -0.57
DDR1-229ENST00000396342 SLC25A5P05141 298 aaKnown RBP11.48□□□□□ -0.57
DDR1-229ENST00000396342 HIST1H1EP10412 219 aaKnown RBP11.48□□□□□ -0.57
DDR1-229ENST00000396342 RPL29P47914 159 aaKnown RBP11.48□□□□□ -0.57
DDR1-229ENST00000396342 GFI1BQ5VTD9 330 aa11.48□□□□□ -0.57
DDR1-229ENST00000396342 MIC13Q5XKP0 118 aa11.48□□□□□ -0.57
DDR1-229ENST00000396342 MZT2BQ6NZ67 158 aa11.48□□□□□ -0.57
DDR1-229ENST00000396342 TMEM37Q8WXS4 190 aa11.48□□□□□ -0.57
DDR1-229ENST00000396342 Q9H8V8 135 aa11.48□□□□□ -0.57
DDR1-229ENST00000396342 SLC39A9Q9NUM3 307 aa11.48□□□□□ -0.57
DDR1-229ENST00000396342 NUDT15Q9NV35 164 aa11.48□□□□□ -0.57
DDR1-229ENST00000396342 HECTD4Q9Y4D8 3996 aa11.47□□□□□ -0.57
DDR1-229ENST00000396342 A0A0J9YY99 117 aa11.47□□□□□ -0.57
DDR1-229ENST00000396342 UBE2L5PA0A1B0GUS4 154 aa11.47□□□□□ -0.57
DDR1-229ENST00000396342 PLAC8L1A1L4L8 177 aa11.47□□□□□ -0.57
DDR1-229ENST00000396342 IGLC2P0DOY2 106 aa11.47□□□□□ -0.57
DDR1-229ENST00000396342 ARL16Q0P5N6 197 aa11.47□□□□□ -0.57
DDR1-229ENST00000396342 MRPL53Q96EL3 112 aaKnown RBP11.47□□□□□ -0.57
DDR1-229ENST00000396342 LINC00477Q96M19 166 aa11.47□□□□□ -0.57
DDR1-229ENST00000396342 GPN1Q9HCN4 374 aaPredicted RBP11.47□□□□□ -0.57
DDR1-229ENST00000396342 KCNIP2Q9NS61 270 aa11.47□□□□□ -0.57
DDR1-229ENST00000396342 WDR83OSQ9Y284 106 aa11.47□□□□□ -0.57
DDR1-229ENST00000396342 LINC00588Q9Y4M8 146 aa11.47□□□□□ -0.57
DDR1-229ENST00000396342 FAM240BA0A1B0GVZ2 78 aa11.46□□□□□ -0.57
DDR1-229ENST00000396342 FAM24AA6NFZ4 105 aa11.46□□□□□ -0.57
DDR1-229ENST00000396342 H3BNG1 76 aa11.46□□□□□ -0.57
DDR1-229ENST00000396342 SLC17A3O00476 420 aa11.46□□□□□ -0.57
DDR1-229ENST00000396342 H2AFB2P0C5Z0 115 aa11.46□□□□□ -0.57
DDR1-229ENST00000396342 PRB4P10163 310 aaPredicted RBP11.46□□□□□ -0.57
DDR1-229ENST00000396342 FGF7P21781 194 aa11.46□□□□□ -0.57
DDR1-229ENST00000396342 TMEM78Q5T7P6 136 aa11.46□□□□□ -0.57
DDR1-229ENST00000396342 ZNF575Q86XF7 245 aa11.46□□□□□ -0.57
DDR1-229ENST00000396342 LYRM2Q9NU23 88 aaPredicted RBP11.46□□□□□ -0.57
DDR1-229ENST00000396342 VPS13DQ5THJ4 4388 aa11.46□□□□□ -0.58
DDR1-229ENST00000396342 HERC2O95714 4834 aa11.46□□□□□ -0.58
DDR1-229ENST00000396342 NPIPB6E9PJ23 425 aa11.45□□□□□ -0.58
DDR1-229ENST00000396342 H3BQ15 152 aa11.45□□□□□ -0.58
DDR1-229ENST00000396342 GPX1P07203 203 aa11.45□□□□□ -0.58
DDR1-229ENST00000396342 BTCP35070 178 aa11.45□□□□□ -0.58
DDR1-229ENST00000396342 DAZ2Q13117 558 aaKnown RBP11.45□□□□□ -0.58
DDR1-229ENST00000396342 PDE6HQ13956 83 aa11.45□□□□□ -0.58
DDR1-229ENST00000396342 SLC25A31Q9H0C2 315 aa11.45□□□□□ -0.58
DDR1-229ENST00000396342 TRAV5A0A0B4J249 113 aa11.44□□□□□ -0.58
DDR1-229ENST00000396342 C7orf71A4D174 169 aa11.44□□□□□ -0.58
DDR1-229ENST00000396342 PRAC2D3DTV9 90 aa11.44□□□□□ -0.58
DDR1-229ENST00000396342 RGS13O14921 159 aa11.44□□□□□ -0.58
DDR1-229ENST00000396342 CT45A10P0DMU9 189 aa11.44□□□□□ -0.58
DDR1-229ENST00000396342 TNP2Q05952 138 aa11.44□□□□□ -0.58
DDR1-229ENST00000396342 BLNKQ8WV28 456 aa11.44□□□□□ -0.58
DDR1-229ENST00000396342 SAT2Q96F10 170 aaPredicted RBP11.44□□□□□ -0.58
DDR1-229ENST00000396342 ARPC5LQ9BPX5 153 aa11.44□□□□□ -0.58
DDR1-229ENST00000396342 SEC22CQ9BRL7 303 aa11.44□□□□□ -0.58
DDR1-229ENST00000396342 CCDC32Q9BV29 185 aa11.44□□□□□ -0.58
DDR1-229ENST00000396342 PARD6GQ9BYG4 376 aaPredicted RBP11.44□□□□□ -0.58
DDR1-229ENST00000396342 TMEM14CQ9P0S9 112 aa11.44□□□□□ -0.58
DDR1-229ENST00000396342 TRBV19A0A075B6N1 114 aa11.43□□□□□ -0.58
DDR1-229ENST00000396342 TRGV1A0A0A0MS02 117 aa11.43□□□□□ -0.58
DDR1-229ENST00000396342 A0A1W2PPQ1 181 aa11.43□□□□□ -0.58
DDR1-229ENST00000396342 EREGO14944 169 aa11.43□□□□□ -0.58
DDR1-229ENST00000396342 BTF3P20290 206 aaKnown RBP11.43□□□□□ -0.58
DDR1-229ENST00000396342 RNASE4P34096 147 aaKnown RBP11.43□□□□□ -0.58
DDR1-229ENST00000396342 CSN1S1P47710 185 aa11.43□□□□□ -0.58
DDR1-229ENST00000396342 EIF4E3Q8N5X7 224 aaKnown RBP11.43□□□□□ -0.58
DDR1-229ENST00000396342 SDHCQ99643 169 aaPredicted RBP11.43□□□□□ -0.58
DDR1-229ENST00000396342 DNAH6Q9C0G6 4158 aa11.43□□□□□ -0.58
DDR1-229ENST00000396342 C17orf112F2Z3M2 114 aa11.42□□□□□ -0.58
DDR1-229ENST00000396342 SLAQ13239 276 aa11.42□□□□□ -0.58
DDR1-229ENST00000396342 VWC2Q2TAL6 325 aa11.42□□□□□ -0.58
DDR1-229ENST00000396342 MORN5Q5VZ52 161 aa11.42□□□□□ -0.58
DDR1-229ENST00000396342 TMEM252Q8N6L7 170 aa11.42□□□□□ -0.58
DDR1-229ENST00000396342 CHAC2Q8WUX2 184 aa11.42□□□□□ -0.58
DDR1-229ENST00000396342 ZNF586Q9NXT0 402 aa11.42□□□□□ -0.58
DDR1-229ENST00000396342 PTTG2Q9NZH5 202 aa11.42□□□□□ -0.58
DDR1-229ENST00000396342 PLA2G10O15496 165 aa11.41□□□□□ -0.58
DDR1-229ENST00000396342 CYCSP99999 105 aaKnown RBP11.41□□□□□ -0.58
DDR1-229ENST00000396342 RAB32Q13637 225 aa11.41□□□□□ -0.58
DDR1-229ENST00000396342 LINC00612Q8N6U2 182 aa11.41□□□□□ -0.58
DDR1-229ENST00000396342 TMPRSS5Q9H3S3 457 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms