RNA–Protein interactions for RNA: ENST00000395246.5

CDC42SE2-202, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE2, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-202ENST00000395246 SH2D7A6NKC9 451 aaPredicted RBP10.78□□□□□ -0.68
CDC42SE2-202ENST00000395246 IGLC6P0CF74 106 aa10.78□□□□□ -0.68
CDC42SE2-202ENST00000395246 RPL19P84098 196 aaKnown RBP10.78□□□□□ -0.68
CDC42SE2-202ENST00000395246 DEFB125Q8N687 156 aa10.78□□□□□ -0.68
CDC42SE2-202ENST00000395246 U3KQK5 164 aa10.78□□□□□ -0.68
CDC42SE2-202ENST00000395246 A0A1W2PS18 150 aa10.77□□□□□ -0.68
CDC42SE2-202ENST00000395246 CRISP2P16562 243 aa10.77□□□□□ -0.68
CDC42SE2-202ENST00000395246 SIGLEC8Q9NYZ4 499 aa10.77□□□□□ -0.68
CDC42SE2-202ENST00000395246 SMPXQ9UHP9 88 aa10.77□□□□□ -0.68
CDC42SE2-202ENST00000395246 A8MWL6 223 aa10.77□□□□□ -0.69
CDC42SE2-202ENST00000395246 GATCO43716 136 aaKnown RBP10.77□□□□□ -0.69
CDC42SE2-202ENST00000395246 LCN12Q6JVE5 192 aa10.77□□□□□ -0.69
CDC42SE2-202ENST00000395246 UNQ9165/PRO28630Q6UXU0 137 aa10.77□□□□□ -0.69
CDC42SE2-202ENST00000395246 C8orf86Q6ZUL3 223 aa10.77□□□□□ -0.69
CDC42SE2-202ENST00000395246 NHLRC2Q8NBF2 726 aa10.77□□□□□ -0.69
CDC42SE2-202ENST00000395246 WFDC11Q8NEX6 87 aa10.77□□□□□ -0.69
CDC42SE2-202ENST00000395246 TRBV12-3P01733 135 aa10.77□□□□□ -0.69
CDC42SE2-202ENST00000395246 RNASE1P07998 156 aaKnown RBP10.77□□□□□ -0.69
CDC42SE2-202ENST00000395246 DAZ1Q9NQZ3 744 aaKnown RBP10.77□□□□□ -0.69
CDC42SE2-202ENST00000395246 CACNA1BQ00975 2339 aa10.76□□□□□ -0.69
CDC42SE2-202ENST00000395246 SPTA1P02549 2419 aa10.76□□□□□ -0.69
CDC42SE2-202ENST00000395246 NDUFA7O95182 113 aa10.76□□□□□ -0.69
CDC42SE2-202ENST00000395246 FHL3Q13643 280 aa10.76□□□□□ -0.69
CDC42SE2-202ENST00000395246 DCANP1Q8TF63 244 aa10.76□□□□□ -0.69
CDC42SE2-202ENST00000395246 C4orf3Q8WVX3 66 aa10.76□□□□□ -0.69
CDC42SE2-202ENST00000395246 CLUHP3Q96NS8 147 aa10.76□□□□□ -0.69
CDC42SE2-202ENST00000395246 SSBP4Q9BWG4 385 aaPredicted RBP10.76□□□□□ -0.69
CDC42SE2-202ENST00000395246 UFC1Q9Y3C8 167 aa10.76□□□□□ -0.69
CDC42SE2-202ENST00000395246 TRAV34A0A0B4J273 112 aa10.76□□□□□ -0.69
CDC42SE2-202ENST00000395246 A0A1W2PPQ1 181 aa10.76□□□□□ -0.69
CDC42SE2-202ENST00000395246 IGHV3-23P01764 117 aa10.76□□□□□ -0.69
CDC42SE2-202ENST00000395246 FABP9Q0Z7S8 132 aa10.76□□□□□ -0.69
CDC42SE2-202ENST00000395246 GDF5OSQ5U4N7 250 aa10.76□□□□□ -0.69
CDC42SE2-202ENST00000395246 CMTM2Q8TAZ6 248 aa10.76□□□□□ -0.69
CDC42SE2-202ENST00000395246 HOXA3O43365 443 aaPredicted RBP10.75□□□□□ -0.69
CDC42SE2-202ENST00000395246 RPS20P60866 119 aaKnown RBP10.75□□□□□ -0.69
CDC42SE2-202ENST00000395246 RBPMS2Q6ZRY4 209 aaKnown RBP10.75□□□□□ -0.69
CDC42SE2-202ENST00000395246 GOLT1AQ6ZVE7 132 aa10.75□□□□□ -0.69
CDC42SE2-202ENST00000395246 SMAD7O15105 426 aaKnown RBP10.75□□□□□ -0.69
CDC42SE2-202ENST00000395246 MED14OSP0DP75 135 aa10.75□□□□□ -0.69
CDC42SE2-202ENST00000395246 NEU1Q99519 415 aa10.75□□□□□ -0.69
CDC42SE2-202ENST00000395246 LY6EQ16553 131 aa10.75□□□□□ -0.69
CDC42SE2-202ENST00000395246 S4R3C0 116 aa10.75□□□□□ -0.69
CDC42SE2-202ENST00000395246 ZFP82Q8N141 532 aa10.74□□□□□ -0.69
CDC42SE2-202ENST00000395246 CSN1S1P47710 185 aa10.74□□□□□ -0.69
CDC42SE2-202ENST00000395246 SLC35B1P78383 322 aa10.74□□□□□ -0.69
CDC42SE2-202ENST00000395246 GBGT1Q8N5D6 347 aa10.74□□□□□ -0.69
CDC42SE2-202ENST00000395246 NDFIP1Q9BT67 221 aa10.74□□□□□ -0.69
CDC42SE2-202ENST00000395246 TRAPPC1Q9Y5R8 145 aa10.74□□□□□ -0.69
CDC42SE2-202ENST00000395246 TMEM213A2RRL7 107 aa10.74□□□□□ -0.69
CDC42SE2-202ENST00000395246 OR8I2Q8N0Y5 310 aa10.74□□□□□ -0.69
CDC42SE2-202ENST00000395246 POM121L12Q8N7R1 296 aa10.74□□□□□ -0.69
CDC42SE2-202ENST00000395246 AURKAIP1Q9NWT8 199 aaPredicted RBP10.74□□□□□ -0.69
CDC42SE2-202ENST00000395246 PRSS47A8MTI9 375 aa10.73□□□□□ -0.69
CDC42SE2-202ENST00000395246 ZNF705GA8MUZ8 300 aaPredicted RBP10.73□□□□□ -0.69
CDC42SE2-202ENST00000395246 OVOL1O14753 267 aa10.73□□□□□ -0.69
CDC42SE2-202ENST00000395246 HIST1H1AQ02539 215 aaPredicted RBP10.73□□□□□ -0.69
CDC42SE2-202ENST00000395246 FAM162BQ5T6X4 162 aa10.73□□□□□ -0.69
CDC42SE2-202ENST00000395246 LINC00477Q96M19 166 aa10.73□□□□□ -0.69
CDC42SE2-202ENST00000395246 SNAI2O43623 268 aa10.72□□□□□ -0.69
CDC42SE2-202ENST00000395246 MS4A10Q96PG2 267 aa10.72□□□□□ -0.69
CDC42SE2-202ENST00000395246 MRPL18Q9H0U6 180 aaKnown RBP10.72□□□□□ -0.69
CDC42SE2-202ENST00000395246 P01737 135 aa10.72□□□□□ -0.69
CDC42SE2-202ENST00000395246 SCGB2A2Q13296 93 aa10.72□□□□□ -0.69
CDC42SE2-202ENST00000395246 SIGLECL1Q8N7X8 197 aa10.72□□□□□ -0.69
CDC42SE2-202ENST00000395246 S100A12P80511 92 aa10.72□□□□□ -0.69
CDC42SE2-202ENST00000395246 Q71RC1 249 aaPredicted RBP10.72□□□□□ -0.69
CDC42SE2-202ENST00000395246 HIST1H2BLQ99880 126 aa10.72□□□□□ -0.69
CDC42SE2-202ENST00000395246 BMI1P35226 326 aa10.71□□□□□ -0.69
CDC42SE2-202ENST00000395246 TCTEX1D4Q5JR98 221 aa10.71□□□□□ -0.69
CDC42SE2-202ENST00000395246 C20orf173Q96LM9 149 aa10.71□□□□□ -0.69
CDC42SE2-202ENST00000395246 GNB4Q9HAV0 340 aa10.71□□□□□ -0.69
CDC42SE2-202ENST00000395246 NRN1Q9NPD7 142 aa10.71□□□□□ -0.69
CDC42SE2-202ENST00000395246 HIGD1CA8MV81 97 aa10.71□□□□□ -0.69
CDC42SE2-202ENST00000395246 M0R3E3 92 aa10.71□□□□□ -0.69
CDC42SE2-202ENST00000395246 NXPH4O95158 308 aa10.71□□□□□ -0.69
CDC42SE2-202ENST00000395246 ASCL2Q99929 193 aa10.71□□□□□ -0.69
CDC42SE2-202ENST00000395246 VGLL1Q99990 258 aa10.71□□□□□ -0.7
CDC42SE2-202ENST00000395246 SCRT2Q9NQ03 307 aa10.71□□□□□ -0.7
CDC42SE2-202ENST00000395246 TRAV8-1A0A0A6YYK1 113 aa10.7□□□□□ -0.7
CDC42SE2-202ENST00000395246 FOSL1P15407 271 aa10.7□□□□□ -0.7
CDC42SE2-202ENST00000395246 ANKRD17O75179 2603 aaKnown RBP10.7□□□□□ -0.7
CDC42SE2-202ENST00000395246 KLLNB2CW77 178 aa10.7□□□□□ -0.7
CDC42SE2-202ENST00000395246 ZNF138P52744 262 aa10.7□□□□□ -0.7
CDC42SE2-202ENST00000395246 HBBP68871 147 aa10.7□□□□□ -0.7
CDC42SE2-202ENST00000395246 ADAMTSL5Q6ZMM2 481 aa10.7□□□□□ -0.7
CDC42SE2-202ENST00000395246 SH2D1AO60880 128 aa10.7□□□□□ -0.7
CDC42SE2-202ENST00000395246 FRMD6-AS1P0C7T7 363 aa10.7□□□□□ -0.7
CDC42SE2-202ENST00000395246 FAM106AQ4KMX7 169 aa10.7□□□□□ -0.7
CDC42SE2-202ENST00000395246 LINC00467Q9BRT7 94 aa10.7□□□□□ -0.7
CDC42SE2-202ENST00000395246 AGPAT4-IT1Q9H0P7 198 aa10.7□□□□□ -0.7
CDC42SE2-202ENST00000395246 DNAJC9-AS1A6NH13 148 aa10.69□□□□□ -0.7
CDC42SE2-202ENST00000395246 PRAC2D3DTV9 90 aa10.69□□□□□ -0.7
CDC42SE2-202ENST00000395246 S100A6P06703 90 aa10.69□□□□□ -0.7
CDC42SE2-202ENST00000395246 ZNF80P51504 273 aaPredicted RBP10.69□□□□□ -0.7
CDC42SE2-202ENST00000395246 PRNTQ86SH4 94 aa10.69□□□□□ -0.7
CDC42SE2-202ENST00000395246 C8orf49Q96NF6 230 aa10.69□□□□□ -0.7
CDC42SE2-202ENST00000395246 PAFAH1B2P68402 229 aa10.69□□□□□ -0.7
CDC42SE2-202ENST00000395246 Q6ZSV7 163 aa10.69□□□□□ -0.7
CDC42SE2-202ENST00000395246 ALKBH7Q9BT30 221 aaPredicted RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms