RNA–Protein interactions for RNA: ENST00000395198.7

HERC4-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERC4, Length 4,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-204ENST00000395198 SPINK2P20155 84 aa3.21□□□□□ -1.9
HERC4-204ENST00000395198 ZFP36P26651 326 aaKnown RBP3.21□□□□□ -1.9
HERC4-204ENST00000395198 MP68P56378 58 aa3.21□□□□□ -1.9
HERC4-204ENST00000395198 FUT5Q11128 374 aa3.21□□□□□ -1.9
HERC4-204ENST00000395198 KIAA0087Q14695 138 aa3.21□□□□□ -1.9
HERC4-204ENST00000395198 MPV17LQ2QL34 196 aa3.21□□□□□ -1.9
HERC4-204ENST00000395198 LINC00242Q5T6M2 205 aa3.21□□□□□ -1.9
HERC4-204ENST00000395198 MORN3Q6PF18 240 aaPredicted RBP3.21□□□□□ -1.9
HERC4-204ENST00000395198 C18orf32Q8TCD1 76 aa3.21□□□□□ -1.9
HERC4-204ENST00000395198 TNFRSF19Q9NS68 423 aa3.21□□□□□ -1.9
HERC4-204ENST00000395198 IGLV9-49A0A0B4J1Y8 123 aa3.21□□□□□ -1.9
HERC4-204ENST00000395198 LOC389332A0A1B0GUA5 103 aa3.21□□□□□ -1.9
HERC4-204ENST00000395198 SYS1-DBNDD2H3BUS1 97 aa3.21□□□□□ -1.9
HERC4-204ENST00000395198 RBMY1FQ15415 496 aaKnown RBP3.21□□□□□ -1.9
HERC4-204ENST00000395198 ODF3L2Q3SX64 289 aa3.21□□□□□ -1.9
HERC4-204ENST00000395198 MIC13Q5XKP0 118 aa3.21□□□□□ -1.9
HERC4-204ENST00000395198 SLC25A42Q86VD7 318 aa3.21□□□□□ -1.9
HERC4-204ENST00000395198 MED12LQ86YW9 2145 aa3.21□□□□□ -1.9
HERC4-204ENST00000395198 TMEM105Q8N8V8 129 aa3.21□□□□□ -1.9
HERC4-204ENST00000395198 OR2A5Q96R48 311 aa3.21□□□□□ -1.9
HERC4-204ENST00000395198 SRXN1Q9BYN0 137 aa3.21□□□□□ -1.9
HERC4-204ENST00000395198 IMUPQ9GZP8 106 aa3.21□□□□□ -1.9
HERC4-204ENST00000395198 LINC00588Q9Y4M8 146 aa3.21□□□□□ -1.9
HERC4-204ENST00000395198 ZNF706Q9Y5V0 76 aaPredicted RBP3.21□□□□□ -1.9
HERC4-204ENST00000395198 HEATR5AQ86XA9 2040 aa3.21□□□□□ -1.9
HERC4-204ENST00000395198 CHD8Q9HCK8 2581 aa3.2□□□□□ -1.9
HERC4-204ENST00000395198 J3QLW9 94 aa3.2□□□□□ -1.9
HERC4-204ENST00000395198 SDCBPO00560 298 aaPredicted RBP3.2□□□□□ -1.9
HERC4-204ENST00000395198 HLA-DMBP28068 263 aa3.2□□□□□ -1.9
HERC4-204ENST00000395198 ZNF138P52744 262 aa3.2□□□□□ -1.9
HERC4-204ENST00000395198 C19orf48Q6RUI8 117 aa3.2□□□□□ -1.9
HERC4-204ENST00000395198 OR51H1Q8NH63 302 aa3.2□□□□□ -1.9
HERC4-204ENST00000395198 MS4A6EQ96DS6 147 aa3.2□□□□□ -1.9
HERC4-204ENST00000395198 LYZL4Q96KX0 146 aa3.2□□□□□ -1.9
HERC4-204ENST00000395198 CCL13Q99616 98 aa3.2□□□□□ -1.9
HERC4-204ENST00000395198 ARHGAP21Q5T5U3 1957 aa3.2□□□□□ -1.9
HERC4-204ENST00000395198 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.2□□□□□ -1.91e-6■■■■□ 23.2
HERC4-204ENST00000395198 IGKV1-9A0A0C4DH69 117 aa3.2□□□□□ -1.9
HERC4-204ENST00000395198 CXorf51AA0A1B0GTR3 108 aa3.2□□□□□ -1.9
HERC4-204ENST00000395198 PGPA6NDG6 321 aa3.2□□□□□ -1.9
HERC4-204ENST00000395198 TMEM256-PLSCR3K7ERE1 68 aa3.2□□□□□ -1.9
HERC4-204ENST00000395198 FRMD6-AS1P0C7T7 363 aa3.2□□□□□ -1.9
HERC4-204ENST00000395198 CA7P43166 264 aa3.2□□□□□ -1.9
HERC4-204ENST00000395198 ZNF136P52737 540 aa3.2□□□□□ -1.9
HERC4-204ENST00000395198 ZNF345Q14585 488 aa3.2□□□□□ -1.9
HERC4-204ENST00000395198 TIMM17AQ99595 171 aa3.2□□□□□ -1.9
HERC4-204ENST00000395198 POLR2J2Q9GZM3 115 aaKnown RBP3.2□□□□□ -1.9
HERC4-204ENST00000395198 OTOGLQ3ZCN5 2332 aa3.2□□□□□ -1.9
HERC4-204ENST00000395198 PTPN13Q12923 2485 aa3.2□□□□□ -1.9
HERC4-204ENST00000395198 PCNX2A6NKB5 2137 aa3.2□□□□□ -1.9
HERC4-204ENST00000395198 IGHV4-34P06331 123 aa3.2□□□□□ -1.9
HERC4-204ENST00000395198 LINC00310P59036 64 aa3.2□□□□□ -1.9
HERC4-204ENST00000395198 SLC48A1Q6P1K1 146 aa3.2□□□□□ -1.9
HERC4-204ENST00000395198 TMEM256Q8N2U0 113 aa3.2□□□□□ -1.9
HERC4-204ENST00000395198 OR8A1Q8NGG7 326 aa3.2□□□□□ -1.9
HERC4-204ENST00000395198 UPK3BQ9BT76 320 aa3.2□□□□□ -1.9
HERC4-204ENST00000395198 PLEKHF2Q9H8W4 249 aa3.2□□□□□ -1.9
HERC4-204ENST00000395198 SERP1Q9Y6X1 66 aa3.2□□□□□ -1.9
HERC4-204ENST00000395198 ESPL1Q14674 2120 aa3.2□□□□□ -1.9
HERC4-204ENST00000395198 ABCA1O95477 2261 aa3.2□□□□□ -1.9
HERC4-204ENST00000395198 IGHV6-1A0A0B4J1U7 121 aa3.2□□□□□ -1.9
HERC4-204ENST00000395198 UMAD1C9J7I0 102 aa3.2□□□□□ -1.9
HERC4-204ENST00000395198 JTBO76095 146 aa3.2□□□□□ -1.9
HERC4-204ENST00000395198 RSPO1Q2MKA7 263 aaPredicted RBP3.2□□□□□ -1.9
HERC4-204ENST00000395198 BPIFA4PQ86YQ2 179 aa3.2□□□□□ -1.9
HERC4-204ENST00000395198 FAM213BQ8TBF2 198 aa3.2□□□□□ -1.9
HERC4-204ENST00000395198 PYGO2Q9BRQ0 406 aa3.2□□□□□ -1.9
HERC4-204ENST00000395198 FAM60AQ9NP50 221 aa3.2□□□□□ -1.9
HERC4-204ENST00000395198 MOB4Q9Y3A3 225 aa3.2□□□□□ -1.9
HERC4-204ENST00000395198 SONP18583 2426 aaKnown RBP3.2□□□□□ -1.9
HERC4-204ENST00000395198 TCF20Q9UGU0 1960 aaKnown RBP3.19□□□□□ -1.9
HERC4-204ENST00000395198 MYO7BQ6PIF6 2116 aa3.19□□□□□ -1.9
HERC4-204ENST00000395198 TRBV20OR9-2A0A075B6H5 130 aa3.19□□□□□ -1.9
HERC4-204ENST00000395198 hADV29S1A0JD25 119 aa3.19□□□□□ -1.9
HERC4-204ENST00000395198 C15orf62A8K5M9 175 aa3.19□□□□□ -1.9
HERC4-204ENST00000395198 DIRC3C9JPN6 131 aa3.19□□□□□ -1.9
HERC4-204ENST00000395198 ZNHIT1O43257 154 aa3.19□□□□□ -1.9
HERC4-204ENST00000395198 NDUFB2O95178 105 aa3.19□□□□□ -1.9
HERC4-204ENST00000395198 IGKV1-5P01602 117 aa3.19□□□□□ -1.9
HERC4-204ENST00000395198 ASIPP42127 132 aa3.19□□□□□ -1.9
HERC4-204ENST00000395198 ERVK-16P61578 105 aa3.19□□□□□ -1.9
HERC4-204ENST00000395198 HOXA4Q00056 320 aaPredicted RBP3.19□□□□□ -1.9
HERC4-204ENST00000395198 PYDC2Q56P42 97 aa3.19□□□□□ -1.9
HERC4-204ENST00000395198 PHF5AQ7RTV0 110 aaKnown RBP3.19□□□□□ -1.9
HERC4-204ENST00000395198 DRAM1Q8N682 238 aa3.19□□□□□ -1.9
HERC4-204ENST00000395198 MRPL30Q8TCC3 161 aaKnown RBP3.19□□□□□ -1.9
HERC4-204ENST00000395198 NTN5Q8WTR8 489 aaPredicted RBP3.19□□□□□ -1.9
HERC4-204ENST00000395198 PMCHL2Q9BQD1 86 aa3.19□□□□□ -1.9
HERC4-204ENST00000395198 SLC39A9Q9NUM3 307 aa3.19□□□□□ -1.9
HERC4-204ENST00000395198 TMEM242Q9NWH2 141 aa3.19□□□□□ -1.9
HERC4-204ENST00000395198 TMEM14AQ9Y6G1 99 aa3.19□□□□□ -1.9
HERC4-204ENST00000395198 MED13LQ71F56 2210 aa3.19□□□□□ -1.9
HERC4-204ENST00000395198 SCN3AQ9NY46 2000 aa3.19□□□□□ -1.9
HERC4-204ENST00000395198 PCSK5Q92824 1860 aa3.19□□□□□ -1.9
HERC4-204ENST00000395198 TRAV8-1A0A0A6YYK1 113 aa3.19□□□□□ -1.9
HERC4-204ENST00000395198 DPRXA6NFQ7 191 aa3.19□□□□□ -1.9
HERC4-204ENST00000395198 LINC00473A8K010 186 aa3.19□□□□□ -1.9
HERC4-204ENST00000395198 COX7A2LO14548 114 aa3.19□□□□□ -1.9
HERC4-204ENST00000395198 CD7P09564 240 aa3.19□□□□□ -1.9
HERC4-204ENST00000395198 H1FXQ92522 213 aaKnown RBP3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms