RNA–Protein interactions for RNA: ENST00000394768.6

SYNE2-205, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 11,095 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-205ENST00000394768 SORL1Q92673 2214 aa6.05□□□□□ -1.44
SYNE2-205ENST00000394768 PRSS29PA6NIE9 313 aa6.05□□□□□ -1.44
SYNE2-205ENST00000394768 GAS1P54826 345 aa6.05□□□□□ -1.44
SYNE2-205ENST00000394768 PPIFP30405 207 aaKnown RBP6.05□□□□□ -1.44
SYNE2-205ENST00000394768 C9orf66Q5T8R8 295 aa6.05□□□□□ -1.44
SYNE2-205ENST00000394768 OCC1Q8TAD7 63 aa6.05□□□□□ -1.44
SYNE2-205ENST00000394768 SHANK2-AS3Q9BTD1 123 aa6.05□□□□□ -1.44
SYNE2-205ENST00000394768 BPESC1Q9GZL8 116 aa6.05□□□□□ -1.44
SYNE2-205ENST00000394768 IGHV1OR15-1A0A075B7D0 117 aa6.05□□□□□ -1.44
SYNE2-205ENST00000394768 ELANEP08246 267 aa6.05□□□□□ -1.44
SYNE2-205ENST00000394768 DEFB131AP59861 70 aa6.05□□□□□ -1.44
SYNE2-205ENST00000394768 IGHV1-69DA0A0B4J2H0 117 aa6.05□□□□□ -1.44
SYNE2-205ENST00000394768 IGHV1-69P01742 117 aa6.05□□□□□ -1.44
SYNE2-205ENST00000394768 VWA8A3KMH1 1905 aa6.05□□□□□ -1.44
SYNE2-205ENST00000394768 SP5Q6BEB4 398 aaPredicted RBP6.05□□□□□ -1.44
SYNE2-205ENST00000394768 EPOPA6NHQ4 379 aa6.05□□□□□ -1.44
SYNE2-205ENST00000394768 ANGP03950 147 aaKnown RBP6.05□□□□□ -1.44
SYNE2-205ENST00000394768 A0A1W2PPI3 338 aa6.05□□□□□ -1.44
SYNE2-205ENST00000394768 C5orf63A6NC05 138 aa6.05□□□□□ -1.44
SYNE2-205ENST00000394768 OVOL3O00110 214 aa6.05□□□□□ -1.44
SYNE2-205ENST00000394768 NDPQ00604 133 aa6.05□□□□□ -1.44
SYNE2-205ENST00000394768 ZNF124Q15973 351 aa6.05□□□□□ -1.44
SYNE2-205ENST00000394768 MED13Q9UHV7 2174 aa6.04□□□□□ -1.44
SYNE2-205ENST00000394768 GREB1LQ9C091 1923 aaPredicted RBP6.04□□□□□ -1.44
SYNE2-205ENST00000394768 HERV-K104P63124 156 aa6.04□□□□□ -1.44
SYNE2-205ENST00000394768 C14orf177Q52M58 125 aa6.04□□□□□ -1.44
SYNE2-205ENST00000394768 BRD3OSQ6XYD6 125 aa6.04□□□□□ -1.44
SYNE2-205ENST00000394768 Q6ZS49 121 aa6.04□□□□□ -1.44
SYNE2-205ENST00000394768 TMEM131Q92545 1883 aa6.04□□□□□ -1.44
SYNE2-205ENST00000394768 KLRD1Q13241 179 aa6.04□□□□□ -1.44
SYNE2-205ENST00000394768 ZNF503Q96F45 646 aa6.04□□□□□ -1.44
SYNE2-205ENST00000394768 FGF16O43320 207 aa6.04□□□□□ -1.44
SYNE2-205ENST00000394768 NCR2O95944 276 aa6.04□□□□□ -1.44
SYNE2-205ENST00000394768 IL15RAQ13261 267 aa6.04□□□□□ -1.44
SYNE2-205ENST00000394768 NUP35Q8NFH5 326 aa6.04□□□□□ -1.44
SYNE2-205ENST00000394768 Q96MF0 132 aa6.04□□□□□ -1.44
SYNE2-205ENST00000394768 NCOR1P1Q9H4R4 102 aa6.04□□□□□ -1.44
SYNE2-205ENST00000394768 SYS1-DBNDD2H3BUS1 97 aa6.04□□□□□ -1.44
SYNE2-205ENST00000394768 LINC01551Q86U37 167 aa6.04□□□□□ -1.44
SYNE2-205ENST00000394768 HIST1H2BKO60814 126 aa6.04□□□□□ -1.44
SYNE2-205ENST00000394768 TRACP01848 142 aa6.04□□□□□ -1.44
SYNE2-205ENST00000394768 HIST1H2BJP06899 126 aa6.04□□□□□ -1.44
SYNE2-205ENST00000394768 HIST1H2BOP23527 126 aa6.04□□□□□ -1.44
SYNE2-205ENST00000394768 HIST1H2BBP33778 126 aa6.04□□□□□ -1.44
SYNE2-205ENST00000394768 HIST1H2BDP58876 126 aa6.04□□□□□ -1.44
SYNE2-205ENST00000394768 HIST1H2BCP62807 126 aa6.04□□□□□ -1.44
SYNE2-205ENST00000394768 HIST2H2BEQ16778 126 aa6.04□□□□□ -1.44
SYNE2-205ENST00000394768 ANXA2RQ3ZCQ2 193 aa6.04□□□□□ -1.44
SYNE2-205ENST00000394768 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.04□□□□□ -1.44
SYNE2-205ENST00000394768 HIST1H2BHQ93079 126 aa6.04□□□□□ -1.44
SYNE2-205ENST00000394768 ZNF625Q96I27 306 aaPredicted RBP6.04□□□□□ -1.44
SYNE2-205ENST00000394768 HIST1H2BNQ99877 126 aa6.04□□□□□ -1.44
SYNE2-205ENST00000394768 HIST1H2BMQ99879 126 aa6.04□□□□□ -1.44
SYNE2-205ENST00000394768 MRPL36Q9P0J6 103 aaKnown RBP6.04□□□□□ -1.44
SYNE2-205ENST00000394768 TP53TG1Q9Y2A0 90 aa6.04□□□□□ -1.44
SYNE2-205ENST00000394768 PLXNA3P51805 1871 aa6.04□□□□□ -1.44
SYNE2-205ENST00000394768 TIRAPP58753 221 aa6.04□□□□□ -1.44
SYNE2-205ENST00000394768 PRSS46E5RG02 174 aa6.04□□□□□ -1.44
SYNE2-205ENST00000394768 GREM1O60565 184 aa6.04□□□□□ -1.44
SYNE2-205ENST00000394768 ZNF134P52741 427 aa6.04□□□□□ -1.44
SYNE2-205ENST00000394768 HAMPP81172 84 aa6.04□□□□□ -1.44
SYNE2-205ENST00000394768 NMSQ5H8A3 153 aa6.04□□□□□ -1.44
SYNE2-205ENST00000394768 C4orf51C9J302 202 aa6.03□□□□□ -1.44
SYNE2-205ENST00000394768 RAMP1O60894 148 aa6.03□□□□□ -1.44
SYNE2-205ENST00000394768 IGHV2-70DA0A0C4DH43 119 aa6.03□□□□□ -1.44
SYNE2-205ENST00000394768 RNF223E7ERA6 249 aa6.03□□□□□ -1.44
SYNE2-205ENST00000394768 RIPPLY3P57055 190 aa6.03□□□□□ -1.44
SYNE2-205ENST00000394768 MESP1Q9BRJ9 268 aa6.03□□□□□ -1.44
SYNE2-205ENST00000394768 NUP210Q8TEM1 1887 aaPredicted RBP6.03□□□□□ -1.44
SYNE2-205ENST00000394768 Q6ZS92 163 aa6.03□□□□□ -1.44
SYNE2-205ENST00000394768 Q86TA4 180 aa6.03□□□□□ -1.44
SYNE2-205ENST00000394768 IGKV2D-24A0A075B6R9 120 aa6.03□□□□□ -1.44
SYNE2-205ENST00000394768 C9JAW5 83 aa6.03□□□□□ -1.44
SYNE2-205ENST00000394768 PTPRQQ9UMZ3 2332 aa6.03□□□□□ -1.44
SYNE2-205ENST00000394768 HGFACQ04756 655 aa6.03□□□□□ -1.44
SYNE2-205ENST00000394768 CD300CQ08708 224 aa6.03□□□□□ -1.44
SYNE2-205ENST00000394768 FOXI2Q6ZQN5 318 aa6.03□□□□□ -1.44
SYNE2-205ENST00000394768 PLXNB3Q9ULL4 1909 aa6.03□□□□□ -1.44
SYNE2-205ENST00000394768 A0A087WWL8 130 aa6.03□□□□□ -1.44
SYNE2-205ENST00000394768 ETDCA0A1B0GVM5 59 aa6.03□□□□□ -1.44
SYNE2-205ENST00000394768 CD59P13987 128 aa6.03□□□□□ -1.44
SYNE2-205ENST00000394768 ACYP1P07311 99 aa6.03□□□□□ -1.44
SYNE2-205ENST00000394768 GSN-AS1Q9NRJ2 163 aa6.03□□□□□ -1.44
SYNE2-205ENST00000394768 F8W1H4 67 aa6.03□□□□□ -1.44
SYNE2-205ENST00000394768 IGKV1D-13A0A0B4J2D9 117 aa6.02□□□□□ -1.45
SYNE2-205ENST00000394768 IGKV1-13P0DP09 117 aa6.02□□□□□ -1.45
SYNE2-205ENST00000394768 DMRTC2Q8IXT2 367 aaPredicted RBP6.02□□□□□ -1.45
SYNE2-205ENST00000394768 CFHR4Q92496 578 aa6.02□□□□□ -1.45
SYNE2-205ENST00000394768 ZNF319Q9P2F9 582 aa6.02□□□□□ -1.45
SYNE2-205ENST00000394768 XCL2Q9UBD3 114 aa6.02□□□□□ -1.45
SYNE2-205ENST00000394768 UBE2CO00762 179 aa6.02□□□□□ -1.45
SYNE2-205ENST00000394768 PFN2P35080 140 aa6.02□□□□□ -1.45
SYNE2-205ENST00000394768 NBL1P41271 181 aa6.02□□□□□ -1.45
SYNE2-205ENST00000394768 FOXG1P55316 489 aaPredicted RBP6.02□□□□□ -1.45
SYNE2-205ENST00000394768 K7ENP7 123 aa6.02□□□□□ -1.45
SYNE2-205ENST00000394768 ZC2HC1BQ5TFG8 222 aa6.02□□□□□ -1.45
SYNE2-205ENST00000394768 TMEM14EPQ6UXP3 125 aa6.02□□□□□ -1.45
SYNE2-205ENST00000394768 WFDC12Q8WWY7 111 aa6.02□□□□□ -1.45
SYNE2-205ENST00000394768 PYGO2Q9BRQ0 406 aa6.02□□□□□ -1.45
SYNE2-205ENST00000394768 ORMDL1Q9P0S3 153 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms